RNA–Protein interactions for RNA: ENST00000556831.5

SLIRP-207, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 729 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-207ENST00000556831 SLC22A6Q4U2R8 563 aa11.52□□□□□ -0.57
SLIRP-207ENST00000556831 ACSM3Q53FZ2 586 aa11.52□□□□□ -0.57
SLIRP-207ENST00000556831 HSD17B12Q53GQ0 312 aa11.52□□□□□ -0.57
SLIRP-207ENST00000556831 LIPKQ5VXJ0 399 aa11.52□□□□□ -0.57
SLIRP-207ENST00000556831 C16orf87Q6PH81 154 aa11.52□□□□□ -0.57
SLIRP-207ENST00000556831 LDLRAD3Q86YD5 345 aa11.52□□□□□ -0.57
SLIRP-207ENST00000556831 CDH26Q8IXH8 852 aa11.52□□□□□ -0.57
SLIRP-207ENST00000556831 PNKDQ8N490 385 aa11.52□□□□□ -0.57
SLIRP-207ENST00000556831 PIP4P2Q8N4L2 257 aa11.52□□□□□ -0.57
SLIRP-207ENST00000556831 NEK7Q8TDX7 302 aa11.52□□□□□ -0.57
SLIRP-207ENST00000556831 TNFRSF14Q92956 283 aa11.52□□□□□ -0.57
SLIRP-207ENST00000556831 MUL1Q969V5 352 aa11.52□□□□□ -0.57
SLIRP-207ENST00000556831 NKX3-1Q99801 234 aaPredicted RBP11.52□□□□□ -0.57
SLIRP-207ENST00000556831 BARHL1Q9BZE3 327 aa11.52□□□□□ -0.57
SLIRP-207ENST00000556831 PRDM13Q9H4Q3 707 aa11.52□□□□□ -0.57
SLIRP-207ENST00000556831 OR6C3Q9NZP0 311 aa11.52□□□□□ -0.57
SLIRP-207ENST00000556831 ST3GAL6Q9Y274 331 aa11.52□□□□□ -0.57
SLIRP-207ENST00000556831 LSM2Q9Y333 95 aaKnown RBP11.52□□□□□ -0.57
SLIRP-207ENST00000556831 C17orf98A8MV24 154 aa11.51□□□□□ -0.57
SLIRP-207ENST00000556831 ARG1P05089 322 aa11.51□□□□□ -0.57
SLIRP-207ENST00000556831 IGHV1-8P0DP01 117 aa11.51□□□□□ -0.57
SLIRP-207ENST00000556831 LMO1P25800 156 aa11.51□□□□□ -0.57
SLIRP-207ENST00000556831 KCNJ3P48549 501 aa11.51□□□□□ -0.57
SLIRP-207ENST00000556831 TMBIM6P55061 237 aa11.51□□□□□ -0.57
SLIRP-207ENST00000556831 RBM11P57052 281 aaKnown RBP11.51□□□□□ -0.57
SLIRP-207ENST00000556831 AESQ08117 197 aa11.51□□□□□ -0.57
SLIRP-207ENST00000556831 MLLT11Q13015 90 aaPredicted RBP11.51□□□□□ -0.57
SLIRP-207ENST00000556831 IRF3Q14653 427 aa11.51□□□□□ -0.57
SLIRP-207ENST00000556831 PIGYQ3MUY2 71 aa11.51□□□□□ -0.57
SLIRP-207ENST00000556831 GLT8D1Q68CQ7 371 aa11.51□□□□□ -0.57
SLIRP-207ENST00000556831 OR52W1Q6IF63 320 aa11.51□□□□□ -0.57
SLIRP-207ENST00000556831 ZNF367Q7RTV3 350 aa11.51□□□□□ -0.57
SLIRP-207ENST00000556831 CEACAM19Q7Z692 300 aa11.51□□□□□ -0.57
SLIRP-207ENST00000556831 SVOPQ8N4V2 548 aa11.51□□□□□ -0.57
SLIRP-207ENST00000556831 C3orf56Q8N813 242 aa11.51□□□□□ -0.57
SLIRP-207ENST00000556831 OR51T1Q8NGJ9 327 aa11.51□□□□□ -0.57
SLIRP-207ENST00000556831 OR5R1Q8NH85 324 aa11.51□□□□□ -0.57
SLIRP-207ENST00000556831 SGCDQ92629 289 aa11.51□□□□□ -0.57
SLIRP-207ENST00000556831 FOXRED1Q96CU9 486 aaPredicted RBP11.51□□□□□ -0.57
SLIRP-207ENST00000556831 ISYNA1Q9NPH2 558 aa11.51□□□□□ -0.57
SLIRP-207ENST00000556831 ZNRD1Q9P1U0 126 aa11.51□□□□□ -0.57
SLIRP-207ENST00000556831 MEIKINA0A087WXM9 373 aa11.5□□□□□ -0.57
SLIRP-207ENST00000556831 ODAMA1E959 279 aa11.5□□□□□ -0.57
SLIRP-207ENST00000556831 TMEM89A2RUT3 159 aa11.5□□□□□ -0.57
SLIRP-207ENST00000556831 ARL6IP5O75915 188 aa11.5□□□□□ -0.57
SLIRP-207ENST00000556831 IGHV4-59P01825 116 aa11.5□□□□□ -0.57
SLIRP-207ENST00000556831 HKR1P10072 659 aa11.5□□□□□ -0.57
SLIRP-207ENST00000556831 GLP1RP43220 463 aa11.5□□□□□ -0.57
SLIRP-207ENST00000556831 TBCEQ15813 527 aaPredicted RBP11.5□□□□□ -0.57
SLIRP-207ENST00000556831 MPV17LQ2QL34 196 aa11.5□□□□□ -0.57
SLIRP-207ENST00000556831 ATAD3CQ5T2N8 411 aa11.5□□□□□ -0.57
SLIRP-207ENST00000556831 HIST2H2BDQ6DRA6 164 aa11.5□□□□□ -0.57
SLIRP-207ENST00000556831 Q6P435 159 aa11.5□□□□□ -0.57
SLIRP-207ENST00000556831 CRIP3Q6Q6R5 217 aa11.5□□□□□ -0.57
SLIRP-207ENST00000556831 GLIPR1L1Q6UWM5 242 aa11.5□□□□□ -0.57
SLIRP-207ENST00000556831 ASCL4Q6XD76 172 aa11.5□□□□□ -0.57
SLIRP-207ENST00000556831 GDPGP1Q6ZNW5 385 aa11.5□□□□□ -0.57
SLIRP-207ENST00000556831 ZNF565Q8N9K5 539 aa11.5□□□□□ -0.57
SLIRP-207ENST00000556831 OR4D6Q8NGJ1 314 aa11.5□□□□□ -0.57
SLIRP-207ENST00000556831 RAB2BQ8WUD1 216 aa11.5□□□□□ -0.57
SLIRP-207ENST00000556831 PHYHIPQ92561 330 aa11.5□□□□□ -0.57
SLIRP-207ENST00000556831 DYRK2Q92630 601 aa11.5□□□□□ -0.57
SLIRP-207ENST00000556831 TMEM203Q969S6 136 aa11.5□□□□□ -0.57
SLIRP-207ENST00000556831 MRPS24Q96EL2 167 aaKnown RBP11.5□□□□□ -0.57
SLIRP-207ENST00000556831 MGLLQ99685 303 aa11.5□□□□□ -0.57
SLIRP-207ENST00000556831 UQCC2Q9BRT2 126 aa11.5□□□□□ -0.57
SLIRP-207ENST00000556831 CHIAQ9BZP6 476 aa11.5□□□□□ -0.57
SLIRP-207ENST00000556831 CST11Q9H112 138 aa11.5□□□□□ -0.57
SLIRP-207ENST00000556831 SPACA1Q9HBV2 294 aa11.5□□□□□ -0.57
SLIRP-207ENST00000556831 SESN1Q9Y6P5 492 aa11.5□□□□□ -0.57
SLIRP-207ENST00000556831 H3BUI4 141 aa11.49□□□□□ -0.57
SLIRP-207ENST00000556831 CRTAPO75718 401 aaPredicted RBP11.49□□□□□ -0.57
SLIRP-207ENST00000556831 RANBP1P43487 201 aa11.49□□□□□ -0.57
SLIRP-207ENST00000556831 IER3P46695 156 aa11.49□□□□□ -0.57
SLIRP-207ENST00000556831 GLIPR1P48060 266 aa11.49□□□□□ -0.57
SLIRP-207ENST00000556831 RPL15P61313 204 aaKnown RBP11.49□□□□□ -0.57
SLIRP-207ENST00000556831 NHLRC3Q5JS37 347 aa11.49□□□□□ -0.57
SLIRP-207ENST00000556831 LINC00299Q6ZSB3 139 aa11.49□□□□□ -0.57
SLIRP-207ENST00000556831 CLVS1Q8IUQ0 354 aaPredicted RBP11.49□□□□□ -0.57
SLIRP-207ENST00000556831 BEND2Q8NDZ0 799 aa11.49□□□□□ -0.57
SLIRP-207ENST00000556831 NDNFQ8TB73 568 aa11.49□□□□□ -0.57
SLIRP-207ENST00000556831 DPCDQ9BVM2 203 aaPredicted RBP11.49□□□□□ -0.57
SLIRP-207ENST00000556831 PLGRKTQ9HBL7 147 aa11.49□□□□□ -0.57
SLIRP-207ENST00000556831 PALMDQ9NP74 551 aa11.49□□□□□ -0.57
SLIRP-207ENST00000556831 ABCB10Q9NRK6 738 aa11.49□□□□□ -0.57
SLIRP-207ENST00000556831 TAS2R3Q9NYW6 316 aa11.49□□□□□ -0.57
SLIRP-207ENST00000556831 GHRLQ9UBU3 117 aa11.49□□□□□ -0.57
SLIRP-207ENST00000556831 VPREB3Q9UKI3 123 aa11.49□□□□□ -0.57
SLIRP-207ENST00000556831 TBL2Q9Y4P3 447 aaKnown RBP11.49□□□□□ -0.57
SLIRP-207ENST00000556831 FAM181BA6NEQ2 426 aa11.48□□□□□ -0.57
SLIRP-207ENST00000556831 ZNF729A6NN14 1252 aaPredicted RBP11.48□□□□□ -0.57
SLIRP-207ENST00000556831 GEMIN2O14893 280 aaKnown RBP11.48□□□□□ -0.57
SLIRP-207ENST00000556831 UBBP0CG47 229 aa11.48□□□□□ -0.57
SLIRP-207ENST00000556831 CPEP16870 476 aa11.48□□□□□ -0.57
SLIRP-207ENST00000556831 CDK2P24941 298 aa11.48□□□□□ -0.57
SLIRP-207ENST00000556831 MAP2K4P45985 399 aa11.48□□□□□ -0.57
SLIRP-207ENST00000556831 COMPP49747 757 aaPredicted RBP11.48□□□□□ -0.57
SLIRP-207ENST00000556831 ARHGDIBP52566 201 aa11.48□□□□□ -0.57
SLIRP-207ENST00000556831 DLX6P56179 175 aa11.48□□□□□ -0.57
SLIRP-207ENST00000556831 TPBGQ13641 420 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms