RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 ZNF75AQ96N20 296 aa4.45□□□□□ -1.7
TMEM260-210ENST00000556422 CNTNAP3BQ96NU0 1288 aa4.45□□□□□ -1.7
TMEM260-210ENST00000556422 RASL10BQ96S79 203 aa4.45□□□□□ -1.7
TMEM260-210ENST00000556422 NELFAQ9H3P2 528 aa4.45□□□□□ -1.7
TMEM260-210ENST00000556422 PIGMQ9H3S5 423 aa4.45□□□□□ -1.7
TMEM260-210ENST00000556422 ZNF391Q9UJN7 358 aa4.45□□□□□ -1.7
TMEM260-210ENST00000556422 AHCTF1Q8WYP5 2266 aa4.44□□□□□ -1.7
TMEM260-210ENST00000556422 MEIKINA0A087WXM9 373 aa4.44□□□□□ -1.7
TMEM260-210ENST00000556422 LOC102723996A0A087X1L8 192 aa4.44□□□□□ -1.7
TMEM260-210ENST00000556422 TRBV5-7A0A0A0MS05 114 aa4.44□□□□□ -1.7
TMEM260-210ENST00000556422 LIPT2A6NK58 231 aa4.44□□□□□ -1.7
TMEM260-210ENST00000556422 ZNF593O00488 134 aaPredicted RBP4.44□□□□□ -1.7
TMEM260-210ENST00000556422 XKRYO14609 159 aa4.44□□□□□ -1.7
TMEM260-210ENST00000556422 EEF1E1O43324 174 aaKnown RBP4.44□□□□□ -1.7
TMEM260-210ENST00000556422 SRSF10O75494 262 aaKnown RBP4.44□□□□□ -1.7
TMEM260-210ENST00000556422 UBL3O95164 117 aa4.44□□□□□ -1.7
TMEM260-210ENST00000556422 ACTL6AO96019 429 aa4.44□□□□□ -1.7
TMEM260-210ENST00000556422 CCL4P13236 92 aa4.44□□□□□ -1.7
TMEM260-210ENST00000556422 SDHBP21912 280 aa4.44□□□□□ -1.7
TMEM260-210ENST00000556422 ROM1Q03395 351 aa4.44□□□□□ -1.7
TMEM260-210ENST00000556422 PDCD1Q15116 288 aa4.44□□□□□ -1.7
TMEM260-210ENST00000556422 SLC25A53Q5H9E4 307 aa4.44□□□□□ -1.7
TMEM260-210ENST00000556422 SLC35G3Q8N808 338 aa4.44□□□□□ -1.7
TMEM260-210ENST00000556422 LHX4Q969G2 390 aa4.44□□□□□ -1.7
TMEM260-210ENST00000556422 SEH1LQ96EE3 360 aa4.44□□□□□ -1.7
TMEM260-210ENST00000556422 RBM24Q9BX46 236 aaKnown RBP4.44□□□□□ -1.7
TMEM260-210ENST00000556422 QTRT1Q9BXR0 403 aaKnown RBP4.44□□□□□ -1.7
TMEM260-210ENST00000556422 ULBP3Q9BZM4 244 aa4.44□□□□□ -1.7
TMEM260-210ENST00000556422 ARL6Q9H0F7 186 aa4.44□□□□□ -1.7
TMEM260-210ENST00000556422 HEXA-AS1Q9H8Q6 139 aa4.44□□□□□ -1.7
TMEM260-210ENST00000556422 MED29Q9NX70 200 aa4.44□□□□□ -1.7
TMEM260-210ENST00000556422 CHCHD2Q9Y6H1 151 aaPredicted RBP4.44□□□□□ -1.7
TMEM260-210ENST00000556422 PRRC2CQ9Y520 2896 aaKnown RBP4.44□□□□□ -1.7
TMEM260-210ENST00000556422 DCDC2BA2VCK2 349 aa4.44□□□□□ -1.7
TMEM260-210ENST00000556422 H3BSH0 61 aa4.44□□□□□ -1.7
TMEM260-210ENST00000556422 HSD17B6O14756 317 aa4.44□□□□□ -1.7
TMEM260-210ENST00000556422 CTDSPLO15194 276 aa4.44□□□□□ -1.7
TMEM260-210ENST00000556422 TSPAN15O95858 294 aa4.44□□□□□ -1.7
TMEM260-210ENST00000556422 TACSTD2P09758 323 aa4.44□□□□□ -1.7
TMEM260-210ENST00000556422 RAB5AP20339 215 aa4.44□□□□□ -1.7
TMEM260-210ENST00000556422 F2RP25116 425 aa4.44□□□□□ -1.7
TMEM260-210ENST00000556422 NFYBP25208 207 aa4.44□□□□□ -1.7
TMEM260-210ENST00000556422 AGTR1P30556 359 aa4.44□□□□□ -1.7
TMEM260-210ENST00000556422 APOBEC1P41238 236 aaKnown RBP4.44□□□□□ -1.7
TMEM260-210ENST00000556422 GNG3P63215 75 aa4.44□□□□□ -1.7
TMEM260-210ENST00000556422 MFGE8Q08431 387 aaPredicted RBP4.44□□□□□ -1.7
TMEM260-210ENST00000556422 ZP4Q12836 540 aa4.44□□□□□ -1.7
TMEM260-210ENST00000556422 OR7A5Q15622 319 aa4.44□□□□□ -1.7
TMEM260-210ENST00000556422 SNAI3Q3KNW1 292 aa4.44□□□□□ -1.7
TMEM260-210ENST00000556422 DCAF12L2Q5VW00 463 aa4.44□□□□□ -1.7
TMEM260-210ENST00000556422 OR2A2Q6IF42 318 aa4.44□□□□□ -1.7
TMEM260-210ENST00000556422 PRSS45Q7RTY3 260 aa4.44□□□□□ -1.7
TMEM260-210ENST00000556422 CMTM4Q8IZR5 234 aa4.44□□□□□ -1.7
TMEM260-210ENST00000556422 CISD2Q8N5K1 135 aaKnown RBP4.44□□□□□ -1.7
TMEM260-210ENST00000556422 OR2M7Q8NG81 312 aa4.44□□□□□ -1.7
TMEM260-210ENST00000556422 MFSD8Q8NHS3 518 aa4.44□□□□□ -1.7
TMEM260-210ENST00000556422 THEM6Q8WUY1 208 aa4.44□□□□□ -1.7
TMEM260-210ENST00000556422 TMEM106AQ96A25 262 aa4.44□□□□□ -1.7
TMEM260-210ENST00000556422 OR5V1Q9UGF6 321 aa4.44□□□□□ -1.7
TMEM260-210ENST00000556422 IKZF2Q9UKS7 526 aa4.44□□□□□ -1.7
TMEM260-210ENST00000556422 LIPGQ9Y5X9 500 aa4.44□□□□□ -1.7
TMEM260-210ENST00000556422 MYO7BQ6PIF6 2116 aa4.44□□□□□ -1.7
TMEM260-210ENST00000556422 OR11H12B2RN74 326 aa4.44□□□□□ -1.7
TMEM260-210ENST00000556422 PPIHO43447 177 aaKnown RBP4.44□□□□□ -1.7
TMEM260-210ENST00000556422 VENTXO95231 258 aa4.44□□□□□ -1.7
TMEM260-210ENST00000556422 TYMSP04818 313 aa4.44□□□□□ -1.7
TMEM260-210ENST00000556422 SERPINE2P07093 398 aa4.44□□□□□ -1.7
TMEM260-210ENST00000556422 OR5G3P0C626 314 aa4.44□□□□□ -1.7
TMEM260-210ENST00000556422 AZU1P20160 251 aa4.44□□□□□ -1.7
TMEM260-210ENST00000556422 ACKR3P25106 362 aa4.44□□□□□ -1.7
TMEM260-210ENST00000556422 LGALS7P47929 136 aa4.44□□□□□ -1.7
TMEM260-210ENST00000556422 NPBWR1P48145 328 aa4.44□□□□□ -1.7
TMEM260-210ENST00000556422 PPIAP62937 165 aaKnown RBP4.44□□□□□ -1.7
TMEM260-210ENST00000556422 PAX2Q02962 417 aa4.44□□□□□ -1.7
TMEM260-210ENST00000556422 RHEBQ15382 184 aa4.44□□□□□ -1.7
TMEM260-210ENST00000556422 PSG3Q16557 428 aa4.44□□□□□ -1.7
TMEM260-210ENST00000556422 UBE2NLQ5JXB2 153 aa4.44□□□□□ -1.7
TMEM260-210ENST00000556422 SIGLEC15Q6ZMC9 328 aa4.44□□□□□ -1.7
TMEM260-210ENST00000556422 MRPL52Q86TS9 123 aaKnown RBP4.44□□□□□ -1.7
TMEM260-210ENST00000556422 IZUMO1Q8IYV9 350 aa4.44□□□□□ -1.7
TMEM260-210ENST00000556422 SLC26A10Q8NG04 563 aa4.44□□□□□ -1.7
TMEM260-210ENST00000556422 OR11H1Q8NG94 326 aa4.44□□□□□ -1.7
TMEM260-210ENST00000556422 OR11H2Q8NH07 326 aa4.44□□□□□ -1.7
TMEM260-210ENST00000556422 OR14L1PQ8NHC6 308 aa4.44□□□□□ -1.7
TMEM260-210ENST00000556422 NRGNQ92686 78 aa4.44□□□□□ -1.7
TMEM260-210ENST00000556422 HIST1H2BAQ96A08 127 aa4.44□□□□□ -1.7
TMEM260-210ENST00000556422 DCBLD2Q96PD2 775 aa4.44□□□□□ -1.7
TMEM260-210ENST00000556422 CHIAQ9BZP6 476 aa4.44□□□□□ -1.7
TMEM260-210ENST00000556422 WFDC1Q9HC57 220 aa4.44□□□□□ -1.7
TMEM260-210ENST00000556422 KLRF1Q9NZS2 232 aa4.44□□□□□ -1.7
TMEM260-210ENST00000556422 OR1A1Q9P1Q5 309 aa4.44□□□□□ -1.7
TMEM260-210ENST00000556422 COA3Q9Y2R0 106 aaPredicted RBP4.44□□□□□ -1.7
TMEM260-210ENST00000556422 V9GY05 133 aa4.44□□□□□ -1.7
TMEM260-210ENST00000556422 IGHV1-45A0A0A0MS14 117 aa4.43□□□□□ -1.7
TMEM260-210ENST00000556422 UBE2QL1A1L167 161 aa4.43□□□□□ -1.7
TMEM260-210ENST00000556422 OOEPA6NGQ2 149 aa4.43□□□□□ -1.7
TMEM260-210ENST00000556422 NPIPB13A6NJU9 1138 aa4.43□□□□□ -1.7
TMEM260-210ENST00000556422 TMEM212A6NML5 194 aa4.43□□□□□ -1.7
TMEM260-210ENST00000556422 HSPB2A8KAH6 182 aa4.43□□□□□ -1.7
TMEM260-210ENST00000556422 NPIPB4C9JG80 1138 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms