RNA–Protein interactions for RNA: ENST00000556353.1

PRPF39-209, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 687 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-209ENST00000556353 ST8SIA1Q92185 356 aa3.19□□□□□ -1.9
PRPF39-209ENST00000556353 TSLPQ969D9 159 aa3.19□□□□□ -1.9
PRPF39-209ENST00000556353 EXOSC8Q96B26 276 aaKnown RBP3.19□□□□□ -1.9
PRPF39-209ENST00000556353 PPWD1Q96BP3 646 aaKnown RBP3.19□□□□□ -1.9
PRPF39-209ENST00000556353 DGCR14Q96DF8 476 aaKnown RBP3.19□□□□□ -1.9
PRPF39-209ENST00000556353 FAHD2AQ96GK7 314 aa3.19□□□□□ -1.9
PRPF39-209ENST00000556353 PPP3R2Q96LZ3 170 aa3.19□□□□□ -1.9
PRPF39-209ENST00000556353 IP6K3Q96PC2 410 aa3.19□□□□□ -1.9
PRPF39-209ENST00000556353 OR2A5Q96R48 311 aa3.19□□□□□ -1.9
PRPF39-209ENST00000556353 FAM173AQ9BQD7 235 aa3.19□□□□□ -1.9
PRPF39-209ENST00000556353 AIF1LQ9BQI0 150 aa3.19□□□□□ -1.9
PRPF39-209ENST00000556353 SLC35A5Q9BS91 424 aa3.19□□□□□ -1.9
PRPF39-209ENST00000556353 DCUN1D5Q9BTE7 237 aa3.19□□□□□ -1.9
PRPF39-209ENST00000556353 DPH7Q9BTV6 452 aa3.19□□□□□ -1.9
PRPF39-209ENST00000556353 RSG1Q9BU20 258 aa3.19□□□□□ -1.9
PRPF39-209ENST00000556353 PPA2Q9H2U2 334 aa3.19□□□□□ -1.9
PRPF39-209ENST00000556353 ZNF430Q9H8G1 570 aaPredicted RBP3.19□□□□□ -1.9
PRPF39-209ENST00000556353 CALHM2Q9HA72 323 aa3.19□□□□□ -1.9
PRPF39-209ENST00000556353 ABCB9Q9NP78 766 aa3.19□□□□□ -1.9
PRPF39-209ENST00000556353 COPS7AQ9UBW8 275 aa3.19□□□□□ -1.9
PRPF39-209ENST00000556353 TAC3Q9UHF0 121 aa3.19□□□□□ -1.9
PRPF39-209ENST00000556353 GNPTGQ9UJJ9 305 aa3.19□□□□□ -1.9
PRPF39-209ENST00000556353 MRTO4Q9UKD2 239 aaKnown RBP3.19□□□□□ -1.9
PRPF39-209ENST00000556353 EMCNQ9ULC0 261 aa3.19□□□□□ -1.9
PRPF39-209ENST00000556353 GSTK1Q9Y2Q3 226 aa3.19□□□□□ -1.9
PRPF39-209ENST00000556353 RNF115Q9Y4L5 304 aa3.19□□□□□ -1.9
PRPF39-209ENST00000556353 PPIAL4AQ9Y536 164 aa3.19□□□□□ -1.9
PRPF39-209ENST00000556353 YLPM1P49750 1951 aaKnown RBP3.19□□□□□ -1.9
PRPF39-209ENST00000556353 CR1P17927 2039 aa3.19□□□□□ -1.9
PRPF39-209ENST00000556353 ALPK2Q86TB3 2170 aa3.18□□□□□ -1.9
PRPF39-209ENST00000556353 NPIPA5A0A0B4J1W7 369 aa3.18□□□□□ -1.9
PRPF39-209ENST00000556353 A0A0G2JMM0 328 aa3.18□□□□□ -1.9
PRPF39-209ENST00000556353 TRBV7-9A0A0J9YWB2 115 aa3.18□□□□□ -1.9
PRPF39-209ENST00000556353 A0A0U1RRA0 63 aa3.18□□□□□ -1.9
PRPF39-209ENST00000556353 A0A1W2PPB8 328 aa3.18□□□□□ -1.9
PRPF39-209ENST00000556353 A0A1W2PRS3 328 aa3.18□□□□□ -1.9
PRPF39-209ENST00000556353 ZNF860A6NHJ4 632 aa3.18□□□□□ -1.9
PRPF39-209ENST00000556353 KIR3DP1A8MWS1 328 aa3.18□□□□□ -1.9
PRPF39-209ENST00000556353 TRIM49D1C9J1S8 452 aa3.18□□□□□ -1.9
PRPF39-209ENST00000556353 NPIPA5E9PKD4 350 aa3.18□□□□□ -1.9
PRPF39-209ENST00000556353 H3BNH8 94 aa3.18□□□□□ -1.9
PRPF39-209ENST00000556353 SLC28A1O00337 649 aa3.18□□□□□ -1.9
PRPF39-209ENST00000556353 KPNA4O00629 521 aaPredicted RBP3.18□□□□□ -1.9
PRPF39-209ENST00000556353 PHYHO14832 338 aa3.18□□□□□ -1.9
PRPF39-209ENST00000556353 ARPC5O15511 151 aa3.18□□□□□ -1.9
PRPF39-209ENST00000556353 RS1O15537 224 aa3.18□□□□□ -1.9
PRPF39-209ENST00000556353 SNAI2O43623 268 aa3.18□□□□□ -1.9
PRPF39-209ENST00000556353 TIMM8AO60220 97 aaPredicted RBP3.18□□□□□ -1.9
PRPF39-209ENST00000556353 DCTN3O75935 186 aa3.18□□□□□ -1.9
PRPF39-209ENST00000556353 SCGNO76038 276 aa3.18□□□□□ -1.9
PRPF39-209ENST00000556353 GLSO94925 669 aaPredicted RBP3.18□□□□□ -1.9
PRPF39-209ENST00000556353 PSMG1O95456 288 aa3.18□□□□□ -1.9
PRPF39-209ENST00000556353 ATP6V1G2O95670 118 aa3.18□□□□□ -1.9
PRPF39-209ENST00000556353 SERPINA1P01009 418 aa3.18□□□□□ -1.9
PRPF39-209ENST00000556353 CST1P01037 141 aa3.18□□□□□ -1.9
PRPF39-209ENST00000556353 FGGP02679 453 aa3.18□□□□□ -1.9
PRPF39-209ENST00000556353 TCRBP04435 133 aa3.18□□□□□ -1.9
PRPF39-209ENST00000556353 SERPINA7P05543 415 aa3.18□□□□□ -1.9
PRPF39-209ENST00000556353 CT45A10P0DMU9 189 aa3.18□□□□□ -1.9
PRPF39-209ENST00000556353 SPI1P17947 270 aa3.18□□□□□ -1.9
PRPF39-209ENST00000556353 IL1RNP18510 177 aa3.18□□□□□ -1.9
PRPF39-209ENST00000556353 PGAM1P18669 254 aa3.18□□□□□ -1.9
PRPF39-209ENST00000556353 TPSB2P20231 275 aa3.18□□□□□ -1.9
PRPF39-209ENST00000556353 PCMT1P22061 227 aa3.18□□□□□ -1.9
PRPF39-209ENST00000556353 ACVR1BP36896 505 aa3.18□□□□□ -1.9
PRPF39-209ENST00000556353 COILP38432 576 aaPredicted RBP3.18□□□□□ -1.9
PRPF39-209ENST00000556353 TTPAP49638 278 aa3.18□□□□□ -1.9
PRPF39-209ENST00000556353 FGF8P55075 233 aaPredicted RBP3.18□□□□□ -1.9
PRPF39-209ENST00000556353 MLF1P58340 268 aa3.18□□□□□ -1.9
PRPF39-209ENST00000556353 HERV-K104P63124 156 aa3.18□□□□□ -1.9
PRPF39-209ENST00000556353 MRPS11P82912 194 aaKnown RBP3.18□□□□□ -1.9
PRPF39-209ENST00000556353 TRIP13Q15645 432 aaPredicted RBP3.18□□□□□ -1.9
PRPF39-209ENST00000556353 TPSAB1Q15661 275 aa3.18□□□□□ -1.9
PRPF39-209ENST00000556353 CARTPTQ16568 116 aa3.18□□□□□ -1.9
PRPF39-209ENST00000556353 MICBQ29980 383 aa3.18□□□□□ -1.9
PRPF39-209ENST00000556353 TMEM176BQ3YBM2 270 aaPredicted RBP3.18□□□□□ -1.9
PRPF39-209ENST00000556353 AGKQ53H12 422 aa3.18□□□□□ -1.9
PRPF39-209ENST00000556353 TRIQKQ629K1 86 aa3.18□□□□□ -1.9
PRPF39-209ENST00000556353 LPCAT4Q643R3 524 aa3.18□□□□□ -1.9
PRPF39-209ENST00000556353 ASPHD2Q6ICH7 369 aa3.18□□□□□ -1.9
PRPF39-209ENST00000556353 STEAP1BQ6NZ63 245 aa3.18□□□□□ -1.9
PRPF39-209ENST00000556353 FUNDC1Q8IVP5 155 aa3.18□□□□□ -1.9
PRPF39-209ENST00000556353 NRMQ8IXM6 262 aa3.18□□□□□ -1.9
PRPF39-209ENST00000556353 CPNE9Q8IYJ1 553 aa3.18□□□□□ -1.9
PRPF39-209ENST00000556353 SYS1Q8N2H4 156 aa3.18□□□□□ -1.9
PRPF39-209ENST00000556353 ZADH2Q8N4Q0 377 aa3.18□□□□□ -1.9
PRPF39-209ENST00000556353 OR2M7Q8NG81 312 aa3.18□□□□□ -1.9
PRPF39-209ENST00000556353 OR9A4Q8NGU2 314 aa3.18□□□□□ -1.9
PRPF39-209ENST00000556353 OR11L1Q8NGX0 322 aa3.18□□□□□ -1.9
PRPF39-209ENST00000556353 PIGXQ8TBF5 258 aa3.18□□□□□ -1.9
PRPF39-209ENST00000556353 PHF10Q8WUB8 498 aaKnown RBP3.18□□□□□ -1.9
PRPF39-209ENST00000556353 SKA2Q8WVK7 121 aaPredicted RBP3.18□□□□□ -1.9
PRPF39-209ENST00000556353 APH1BQ8WW43 257 aa3.18□□□□□ -1.9
PRPF39-209ENST00000556353 ACOT11Q8WXI4 607 aaPredicted RBP3.18□□□□□ -1.9
PRPF39-209ENST00000556353 PIGCQ92535 297 aa3.18□□□□□ -1.9
PRPF39-209ENST00000556353 STMN2Q93045 179 aa3.18□□□□□ -1.9
PRPF39-209ENST00000556353 TMEM203Q969S6 136 aa3.18□□□□□ -1.9
PRPF39-209ENST00000556353 FAM104AQ969W3 186 aa3.18□□□□□ -1.9
PRPF39-209ENST00000556353 FAM46BQ96A09 425 aa3.18□□□□□ -1.9
PRPF39-209ENST00000556353 PINX1Q96BK5 328 aaKnown RBP3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms