RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 CALHM1Q8IU99 346 aa6.02□□□□□ -1.44
TDP1-213ENST00000555880 MKXQ8IYA7 352 aa6.02□□□□□ -1.44
TDP1-213ENST00000555880 ZDHHC23Q8IYP9 409 aa6.02□□□□□ -1.44
TDP1-213ENST00000555880 CMTM1Q8IZ96 169 aa6.02□□□□□ -1.44
TDP1-213ENST00000555880 OR2C3Q8N628 320 aa6.02□□□□□ -1.44
TDP1-213ENST00000555880 DMBX1Q8NFW5 382 aa6.02□□□□□ -1.44
TDP1-213ENST00000555880 OR56B2PQ8NGI1 322 aa6.02□□□□□ -1.44
TDP1-213ENST00000555880 OR4D5Q8NGN0 318 aa6.02□□□□□ -1.44
TDP1-213ENST00000555880 FGFBP3Q8TAT2 258 aa6.02□□□□□ -1.44
TDP1-213ENST00000555880 FAM213BQ8TBF2 198 aa6.02□□□□□ -1.44
TDP1-213ENST00000555880 C2CD4CQ8TF44 421 aa6.02□□□□□ -1.44
TDP1-213ENST00000555880 SLAMF9Q96A28 289 aa6.02□□□□□ -1.44
TDP1-213ENST00000555880 APOBEC3DQ96AK3 386 aaPredicted RBP6.02□□□□□ -1.44
TDP1-213ENST00000555880 C12orf57Q99622 126 aa6.02□□□□□ -1.44
TDP1-213ENST00000555880 SLC35B3Q9H1N7 401 aa6.02□□□□□ -1.44
TDP1-213ENST00000555880 SH3BGRL3Q9H299 93 aa6.02□□□□□ -1.44
TDP1-213ENST00000555880 RNF122Q9H9V4 155 aa6.02□□□□□ -1.44
TDP1-213ENST00000555880 WFDC1Q9HC57 220 aa6.02□□□□□ -1.44
TDP1-213ENST00000555880 KCNJ16Q9NPI9 418 aa6.02□□□□□ -1.44
TDP1-213ENST00000555880 P4HTMQ9NXG6 502 aa6.02□□□□□ -1.44
TDP1-213ENST00000555880 IGKV3D-15A0A087WSY6 115 aa6.02□□□□□ -1.45
TDP1-213ENST00000555880 MEX3AA1L020 520 aaKnown RBP6.02□□□□□ -1.45
TDP1-213ENST00000555880 C5orf49A4QMS7 147 aa6.02□□□□□ -1.45
TDP1-213ENST00000555880 NKX2-6A6NCS4 301 aa6.02□□□□□ -1.45
TDP1-213ENST00000555880 COLCA2A8K830 154 aa6.02□□□□□ -1.45
TDP1-213ENST00000555880 PATE3B3GLJ2 98 aa6.02□□□□□ -1.45
TDP1-213ENST00000555880 C9JQL5 133 aa6.02□□□□□ -1.45
TDP1-213ENST00000555880 WRBO00258 174 aa6.02□□□□□ -1.45
TDP1-213ENST00000555880 SSSCA1O60232 199 aa6.02□□□□□ -1.45
TDP1-213ENST00000555880 PITX3O75364 302 aa6.02□□□□□ -1.45
TDP1-213ENST00000555880 SNRNP70P08621 437 aaKnown RBP6.02□□□□□ -1.45
TDP1-213ENST00000555880 BCL3P20749 454 aa6.02□□□□□ -1.45
TDP1-213ENST00000555880 HAAOP46952 286 aa6.02□□□□□ -1.45
TDP1-213ENST00000555880 NPBWR2P48146 333 aa6.02□□□□□ -1.45
TDP1-213ENST00000555880 KCNJ3P48549 501 aa6.02□□□□□ -1.45
TDP1-213ENST00000555880 GPM6AP51674 278 aa6.02□□□□□ -1.45
TDP1-213ENST00000555880 GFRA1P56159 465 aa6.02□□□□□ -1.45
TDP1-213ENST00000555880 FGF12P61328 243 aa6.02□□□□□ -1.45
TDP1-213ENST00000555880 RND3P61587 244 aa6.02□□□□□ -1.45
TDP1-213ENST00000555880 ARF1P84077 181 aaKnown RBP6.02□□□□□ -1.45
TDP1-213ENST00000555880 Q0VFX4 171 aa6.02□□□□□ -1.45
TDP1-213ENST00000555880 CLINT1Q14677 625 aa6.02□□□□□ -1.45
TDP1-213ENST00000555880 LPAL2Q16609 132 aa6.02□□□□□ -1.45
TDP1-213ENST00000555880 MPV17LQ2QL34 196 aa6.02□□□□□ -1.45
TDP1-213ENST00000555880 AWAT1Q58HT5 328 aa6.02□□□□□ -1.45
TDP1-213ENST00000555880 TCEAL6Q6IPX3 200 aa6.02□□□□□ -1.45
TDP1-213ENST00000555880 COLCA1Q6ZS62 124 aa6.02□□□□□ -1.45
TDP1-213ENST00000555880 ZFP82Q8N141 532 aa6.02□□□□□ -1.45
TDP1-213ENST00000555880 SUMF1Q8NBK3 374 aa6.02□□□□□ -1.45
TDP1-213ENST00000555880 CPEB3Q8NE35 698 aaKnown RBP6.02□□□□□ -1.45
TDP1-213ENST00000555880 Q8NFD4 153 aa6.02□□□□□ -1.45
TDP1-213ENST00000555880 OR1J1Q8NGS3 322 aa6.02□□□□□ -1.45
TDP1-213ENST00000555880 CD300LFQ8TDQ1 290 aa6.02□□□□□ -1.45
TDP1-213ENST00000555880 CT55Q8WUE5 264 aa6.02□□□□□ -1.45
TDP1-213ENST00000555880 BSCL2Q96G97 398 aaPredicted RBP6.02□□□□□ -1.45
TDP1-213ENST00000555880 ZNF845Q96IR2 970 aaPredicted RBP6.02□□□□□ -1.45
TDP1-213ENST00000555880 TMEM56Q96MV1 263 aa6.02□□□□□ -1.45
TDP1-213ENST00000555880 CLCC1Q96S66 551 aa6.02□□□□□ -1.45
TDP1-213ENST00000555880 FAM173AQ9BQD7 235 aa6.02□□□□□ -1.45
TDP1-213ENST00000555880 ZPBPQ9BS86 351 aa6.02□□□□□ -1.45
TDP1-213ENST00000555880 LINC00470Q9BZP3 86 aa6.02□□□□□ -1.45
TDP1-213ENST00000555880 STRADBQ9C0K7 418 aa6.02□□□□□ -1.45
TDP1-213ENST00000555880 RIMS4Q9H426 269 aaPredicted RBP6.02□□□□□ -1.45
TDP1-213ENST00000555880 PLK3Q9H4B4 646 aa6.02□□□□□ -1.45
TDP1-213ENST00000555880 SMDT1Q9H4I9 107 aa6.02□□□□□ -1.45
TDP1-213ENST00000555880 OPA3Q9H6K4 179 aa6.02□□□□□ -1.45
TDP1-213ENST00000555880 PLEKHF2Q9H8W4 249 aa6.02□□□□□ -1.45
TDP1-213ENST00000555880 UNKLQ9H9P5 680 aaKnown RBP6.02□□□□□ -1.45
TDP1-213ENST00000555880 Q9N2K0 584 aa6.02□□□□□ -1.45
TDP1-213ENST00000555880 SLC7A10Q9NS82 523 aa6.02□□□□□ -1.45
TDP1-213ENST00000555880 LRFN1Q9P244 771 aa6.02□□□□□ -1.45
TDP1-213ENST00000555880 ABI3Q9P2A4 366 aa6.02□□□□□ -1.45
TDP1-213ENST00000555880 TMEM56-RWDD3S4R434 201 aa6.02□□□□□ -1.45
TDP1-213ENST00000555880 A0A1B0GW64 132 aa6.01□□□□□ -1.45
TDP1-213ENST00000555880 C7orf77A4D0Y5 90 aa6.01□□□□□ -1.45
TDP1-213ENST00000555880 BTBD17A6NE02 478 aa6.01□□□□□ -1.45
TDP1-213ENST00000555880 ADAM20O43506 726 aa6.01□□□□□ -1.45
TDP1-213ENST00000555880 NAPSAO96009 420 aa6.01□□□□□ -1.45
TDP1-213ENST00000555880 COX5BP10606 129 aa6.01□□□□□ -1.45
TDP1-213ENST00000555880 GNRHRP30968 328 aa6.01□□□□□ -1.45
TDP1-213ENST00000555880 ARR3P36575 388 aa6.01□□□□□ -1.45
TDP1-213ENST00000555880 FHITP49789 147 aa6.01□□□□□ -1.45
TDP1-213ENST00000555880 RAB2AP61019 212 aa6.01□□□□□ -1.45
TDP1-213ENST00000555880 PLP2Q04941 152 aa6.01□□□□□ -1.45
TDP1-213ENST00000555880 SRYQ05066 204 aa6.01□□□□□ -1.45
TDP1-213ENST00000555880 BAXQ07812 192 aa6.01□□□□□ -1.45
TDP1-213ENST00000555880 CEACAM21Q3KPI0 293 aa6.01□□□□□ -1.45
TDP1-213ENST00000555880 RNF212Q495C1 297 aa6.01□□□□□ -1.45
TDP1-213ENST00000555880 ABHD17BQ5VST6 288 aa6.01□□□□□ -1.45
TDP1-213ENST00000555880 LINC00596Q86U02 117 aa6.01□□□□□ -1.45
TDP1-213ENST00000555880 BATF2Q8N1L9 274 aa6.01□□□□□ -1.45
TDP1-213ENST00000555880 GAPTQ8N292 157 aa6.01□□□□□ -1.45
TDP1-213ENST00000555880 TMEM105Q8N8V8 129 aa6.01□□□□□ -1.45
TDP1-213ENST00000555880 SUMF2Q8NBJ7 301 aa6.01□□□□□ -1.45
TDP1-213ENST00000555880 OR8G5Q8NG78 346 aa6.01□□□□□ -1.45
TDP1-213ENST00000555880 OR2G3Q8NGZ4 309 aa6.01□□□□□ -1.45
TDP1-213ENST00000555880 SFT2D1Q8WV19 159 aa6.01□□□□□ -1.45
TDP1-213ENST00000555880 GNPNAT1Q96EK6 184 aaPredicted RBP6.01□□□□□ -1.45
TDP1-213ENST00000555880 PRRG4Q9BZD6 226 aa6.01□□□□□ -1.45
TDP1-213ENST00000555880 TUBA4BQ9H853 241 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms