RNA–Protein interactions for RNA: ENST00000555609.5

TUBB3-209, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 1,855 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-209ENST00000555609 KIR3DP1A8MWS1 328 aa13.91□□□□□ -0.18
TUBB3-209ENST00000555609 M0R296 226 aa13.91□□□□□ -0.18
TUBB3-209ENST00000555609 MRPL33O75394 65 aaKnown RBP13.91□□□□□ -0.18
TUBB3-209ENST00000555609 CFIP05156 583 aa13.91□□□□□ -0.18
TUBB3-209ENST00000555609 SMIM6P0DI80 62 aa13.91□□□□□ -0.18
TUBB3-209ENST00000555609 SLC25A6P12236 298 aa13.91□□□□□ -0.18
TUBB3-209ENST00000555609 CEACAM1P13688 526 aa13.91□□□□□ -0.18
TUBB3-209ENST00000555609 VDAC1P21796 283 aa13.91□□□□□ -0.18
TUBB3-209ENST00000555609 CYB561P49447 251 aa13.91□□□□□ -0.18
TUBB3-209ENST00000555609 ID3Q02535 119 aa13.91□□□□□ -0.18
TUBB3-209ENST00000555609 DAZAP2Q15038 168 aaPredicted RBP13.91□□□□□ -0.18
TUBB3-209ENST00000555609 OR8G1Q15617 311 aa13.91□□□□□ -0.18
TUBB3-209ENST00000555609 WIPI1Q5MNZ9 446 aaPredicted RBP13.91□□□□□ -0.18
TUBB3-209ENST00000555609 CLEC9AQ6UXN8 241 aa13.91□□□□□ -0.18
TUBB3-209ENST00000555609 MEX3BQ6ZN04 569 aaKnown RBP13.91□□□□□ -0.18
TUBB3-209ENST00000555609 Q6ZPA2 131 aa13.91□□□□□ -0.18
TUBB3-209ENST00000555609 HSD17B11Q8NBQ5 300 aa13.91□□□□□ -0.18
TUBB3-209ENST00000555609 NOSIPQ9Y314 301 aaKnown RBP13.91□□□□□ -0.18
TUBB3-209ENST00000555609 RFPL3SP0C7P2 107 aa13.9□□□□□ -0.18
TUBB3-209ENST00000555609 GDF1P27539 372 aa13.9□□□□□ -0.18
TUBB3-209ENST00000555609 EIF2S3LQ2VIR3 472 aaKnown RBP13.9□□□□□ -0.18
TUBB3-209ENST00000555609 IGSF11Q5DX21 431 aa13.9□□□□□ -0.18
TUBB3-209ENST00000555609 DCAF12Q5T6F0 453 aa13.9□□□□□ -0.18
TUBB3-209ENST00000555609 ZDHHC23Q8IYP9 409 aa13.9□□□□□ -0.18
TUBB3-209ENST00000555609 CMTM1Q8IZ96 169 aa13.9□□□□□ -0.18
TUBB3-209ENST00000555609 CPEB3Q8NE35 698 aaKnown RBP13.9□□□□□ -0.18
TUBB3-209ENST00000555609 OR5A2Q8NGI9 324 aa13.9□□□□□ -0.18
TUBB3-209ENST00000555609 OR5D13Q8NGL4 314 aa13.9□□□□□ -0.18
TUBB3-209ENST00000555609 OR2G3Q8NGZ4 309 aa13.9□□□□□ -0.18
TUBB3-209ENST00000555609 FAM213BQ8TBF2 198 aa13.9□□□□□ -0.18
TUBB3-209ENST00000555609 C2CD4CQ8TF44 421 aa13.9□□□□□ -0.18
TUBB3-209ENST00000555609 APOBEC3DQ96AK3 386 aaPredicted RBP13.9□□□□□ -0.18
TUBB3-209ENST00000555609 USB1Q9BQ65 265 aaKnown RBP13.9□□□□□ -0.18
TUBB3-209ENST00000555609 ZPBPQ9BS86 351 aa13.9□□□□□ -0.18
TUBB3-209ENST00000555609 PARP12Q9H0J9 701 aaKnown RBP13.9□□□□□ -0.18
TUBB3-209ENST00000555609 SH3BGRL3Q9H299 93 aa13.9□□□□□ -0.18
TUBB3-209ENST00000555609 P4HTMQ9NXG6 502 aa13.9□□□□□ -0.18
TUBB3-209ENST00000555609 METTL1Q9UBP6 276 aaKnown RBP13.9□□□□□ -0.18
TUBB3-209ENST00000555609 TCFL5Q9UL49 500 aa13.9□□□□□ -0.18
TUBB3-209ENST00000555609 ATP23Q9Y6H3 246 aa13.9□□□□□ -0.18
TUBB3-209ENST00000555609 LRP5LA4QPB2 252 aa13.89□□□□□ -0.19
TUBB3-209ENST00000555609 FAM24AA6NFZ4 105 aa13.89□□□□□ -0.19
TUBB3-209ENST00000555609 ZNF587BE7ETH6 402 aa13.89□□□□□ -0.19
TUBB3-209ENST00000555609 ZNF205O95201 554 aa13.89□□□□□ -0.19
TUBB3-209ENST00000555609 S100A9P06702 114 aaKnown RBP13.89□□□□□ -0.19
TUBB3-209ENST00000555609 RAB5AP20339 215 aa13.89□□□□□ -0.19
TUBB3-209ENST00000555609 NPBWR2P48146 333 aa13.89□□□□□ -0.19
TUBB3-209ENST00000555609 Q0VFX4 171 aa13.89□□□□□ -0.19
TUBB3-209ENST00000555609 PRDX4Q13162 271 aa13.89□□□□□ -0.19
TUBB3-209ENST00000555609 TMEM182Q6ZP80 229 aaPredicted RBP13.89□□□□□ -0.19
TUBB3-209ENST00000555609 C1QL4Q86Z23 238 aa13.89□□□□□ -0.19
TUBB3-209ENST00000555609 TMEM252Q8N6L7 170 aa13.89□□□□□ -0.19
TUBB3-209ENST00000555609 KIAA1456Q9P272 454 aa13.89□□□□□ -0.19
TUBB3-209ENST00000555609 MYO15AQ9UKN7 3530 aa13.89□□□□□ -0.19
TUBB3-209ENST00000555609 IGSF23A1L1A6 192 aa13.89□□□□□ -0.19
TUBB3-209ENST00000555609 H0Y980 276 aa13.89□□□□□ -0.19
TUBB3-209ENST00000555609 TRAPPC2LH3BP13 241 aa13.89□□□□□ -0.19
TUBB3-209ENST00000555609 HBE1P02100 147 aa13.89□□□□□ -0.19
TUBB3-209ENST00000555609 BCL3P20749 454 aa13.89□□□□□ -0.19
TUBB3-209ENST00000555609 ATP6V0CP27449 155 aa13.89□□□□□ -0.19
TUBB3-209ENST00000555609 RAB2AP61019 212 aa13.89□□□□□ -0.19
TUBB3-209ENST00000555609 SNRPEP62304 92 aaKnown RBP13.89□□□□□ -0.19
TUBB3-209ENST00000555609 IL24Q13007 206 aa13.89□□□□□ -0.19
TUBB3-209ENST00000555609 NMSQ5H8A3 153 aa13.89□□□□□ -0.19
TUBB3-209ENST00000555609 SOHLH1Q5JUK2 328 aa13.89□□□□□ -0.19
TUBB3-209ENST00000555609 ZFP82Q8N141 532 aa13.89□□□□□ -0.19
TUBB3-209ENST00000555609 SUMF2Q8NBJ7 301 aa13.89□□□□□ -0.19
TUBB3-209ENST00000555609 OR56B2PQ8NGI1 322 aa13.89□□□□□ -0.19
TUBB3-209ENST00000555609 RBFOX3A6NFN3 312 aa13.88□□□□□ -0.19
TUBB3-209ENST00000555609 SLC22A20A6NK97 555 aa13.88□□□□□ -0.19
TUBB3-209ENST00000555609 SS18L1O75177 396 aaPredicted RBP13.88□□□□□ -0.19
TUBB3-209ENST00000555609 OTX2P32243 289 aa13.88□□□□□ -0.19
TUBB3-209ENST00000555609 ARR3P36575 388 aa13.88□□□□□ -0.19
TUBB3-209ENST00000555609 SULT1A1P50225 295 aa13.88□□□□□ -0.19
TUBB3-209ENST00000555609 ARF1P84077 181 aaKnown RBP13.88□□□□□ -0.19
TUBB3-209ENST00000555609 HIKESHIQ53FT3 197 aa13.88□□□□□ -0.19
TUBB3-209ENST00000555609 SPIN3Q5JUX0 258 aa13.88□□□□□ -0.19
TUBB3-209ENST00000555609 C6orf15Q6UXA7 325 aaPredicted RBP13.88□□□□□ -0.19
TUBB3-209ENST00000555609 MRPL21Q7Z2W9 205 aaKnown RBP13.88□□□□□ -0.19
TUBB3-209ENST00000555609 HIST1H2AAQ96QV6 131 aa13.88□□□□□ -0.19
TUBB3-209ENST00000555609 LHX6Q9UPM6 363 aa13.88□□□□□ -0.19
TUBB3-209ENST00000555609 EIF3GO75821 320 aaKnown RBP eCLIP13.87□□□□□ -0.19
TUBB3-209ENST00000555609 DFFBO76075 338 aa13.87□□□□□ -0.19
TUBB3-209ENST00000555609 TDGF1P13385 188 aa13.87□□□□□ -0.19
TUBB3-209ENST00000555609 FHITP49789 147 aa13.87□□□□□ -0.19
TUBB3-209ENST00000555609 POLR2GP62487 172 aaKnown RBP eCLIP13.87□□□□□ -0.19
TUBB3-209ENST00000555609 RNPS1Q15287 305 aaKnown RBP13.87□□□□□ -0.19
TUBB3-209ENST00000555609 AKIRIN2Q53H80 203 aa13.87□□□□□ -0.19
TUBB3-209ENST00000555609 SP5Q6BEB4 398 aaPredicted RBP13.87□□□□□ -0.19
TUBB3-209ENST00000555609 ZNF818PQ6ZRF7 136 aa13.87□□□□□ -0.19
TUBB3-209ENST00000555609 GAPTQ8N292 157 aa13.87□□□□□ -0.19
TUBB3-209ENST00000555609 IL22RA1Q8N6P7 574 aa13.87□□□□□ -0.19
TUBB3-209ENST00000555609 ABHD3Q8WU67 409 aa13.87□□□□□ -0.19
TUBB3-209ENST00000555609 RBMXL1Q96E39 390 aaKnown RBP13.87□□□□□ -0.19
TUBB3-209ENST00000555609 FAM173AQ9BQD7 235 aa13.87□□□□□ -0.19
TUBB3-209ENST00000555609 DEPPQ9NTK1 212 aa13.87□□□□□ -0.19
TUBB3-209ENST00000555609 B4GALT7Q9UBV7 327 aa13.87□□□□□ -0.19
TUBB3-209ENST00000555609 FBXO7Q9Y3I1 522 aa13.87□□□□□ -0.19
TUBB3-209ENST00000555609 ZNF724A8MTY0 619 aa13.87□□□□□ -0.19
TUBB3-209ENST00000555609 ADAM20O43506 726 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms