RNA–Protein interactions for RNA: ENST00000555405.5

NEK9-205, Transcript of NIMA related kinase 9, humanhuman

TSL 1 (best)

Gene NEK9, Length 3,357 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-205ENST00000555405 FAM89BQ8N5H3 189 aa8.55□□□□□ -1.04
NEK9-205ENST00000555405 CELF2-AS1Q8N7Q2 184 aa8.55□□□□□ -1.04
NEK9-205ENST00000555405 GPX8Q8TED1 209 aa8.55□□□□□ -1.04
NEK9-205ENST00000555405 C15orf40Q8WUR7 153 aa8.55□□□□□ -1.04
NEK9-205ENST00000555405 TMEM204Q9BSN7 226 aa8.55□□□□□ -1.04
NEK9-205ENST00000555405 HRASLSQ9HDD0 168 aa8.55□□□□□ -1.04
NEK9-205ENST00000555405 IGKV1D-17A0A075B6S4 117 aa8.55□□□□□ -1.04
NEK9-205ENST00000555405 DANCRP0C864 163 aa8.55□□□□□ -1.04
NEK9-205ENST00000555405 ATP5J2P56134 94 aa8.55□□□□□ -1.04
NEK9-205ENST00000555405 AP3S2P59780 193 aa8.55□□□□□ -1.04
NEK9-205ENST00000555405 ERVFRD-1P60508 538 aa8.55□□□□□ -1.04
NEK9-205ENST00000555405 BAMBIQ13145 260 aa8.55□□□□□ -1.04
NEK9-205ENST00000555405 RBM39Q14498 530 aaKnown RBP8.55□□□□□ -1.04
NEK9-205ENST00000555405 KRBOX4Q5JUW0 171 aa8.55□□□□□ -1.04
NEK9-205ENST00000555405 ZNF525Q8N782 197 aa8.55□□□□□ -1.04
NEK9-205ENST00000555405 TRIM63Q969Q1 353 aa8.55□□□□□ -1.04
NEK9-205ENST00000555405 DIRC2Q96SL1 478 aa8.55□□□□□ -1.04
NEK9-205ENST00000555405 MAB21L2Q9Y586 359 aa8.55□□□□□ -1.04
NEK9-205ENST00000555405 NPTNQ9Y639 398 aa8.55□□□□□ -1.04
NEK9-205ENST00000555405 OOEPA6NGQ2 149 aa8.54□□□□□ -1.04
NEK9-205ENST00000555405 SERPINE3A8MV23 424 aa8.54□□□□□ -1.04
NEK9-205ENST00000555405 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.54□□□□□ -1.04
NEK9-205ENST00000555405 SCTP09683 121 aa8.54□□□□□ -1.04
NEK9-205ENST00000555405 GSTT2P0CG29 244 aa8.54□□□□□ -1.04
NEK9-205ENST00000555405 PGAM2P15259 253 aa8.54□□□□□ -1.04
NEK9-205ENST00000555405 KRTAP10-9P60411 292 aa8.54□□□□□ -1.04
NEK9-205ENST00000555405 CBX3Q13185 183 aa8.54□□□□□ -1.04
NEK9-205ENST00000555405 FAM53AQ6NSI3 398 aaPredicted RBP8.54□□□□□ -1.04
NEK9-205ENST00000555405 C20orf204Q6ZNR8 217 aa8.54□□□□□ -1.04
NEK9-205ENST00000555405 C12orf4Q9NQ89 552 aa8.54□□□□□ -1.04
NEK9-205ENST00000555405 IL36GQ9NZH8 169 aa8.54□□□□□ -1.04
NEK9-205ENST00000555405 TRAV38-1A0A0B4J264 116 aa8.54□□□□□ -1.04
NEK9-205ENST00000555405 TMEM82A0PJX8 343 aa8.54□□□□□ -1.04
NEK9-205ENST00000555405 TMEM178BH3BS89 294 aa8.54□□□□□ -1.04
NEK9-205ENST00000555405 SLC33A1O00400 549 aaPredicted RBP8.54□□□□□ -1.04
NEK9-205ENST00000555405 PHF1O43189 567 aaPredicted RBP8.54□□□□□ -1.04
NEK9-205ENST00000555405 TMEM127O75204 238 aa8.54□□□□□ -1.04
NEK9-205ENST00000555405 AKAIN1P0CW23 69 aa8.54□□□□□ -1.04
NEK9-205ENST00000555405 NFYBP25208 207 aa8.54□□□□□ -1.04
NEK9-205ENST00000555405 NPY4RP50391 375 aa8.54□□□□□ -1.04
NEK9-205ENST00000555405 ERVK11-1P61568 191 aa8.54□□□□□ -1.04
NEK9-205ENST00000555405 EFNB3Q15768 340 aa8.54□□□□□ -1.04
NEK9-205ENST00000555405 MPV17LQ2QL34 196 aa8.54□□□□□ -1.04
NEK9-205ENST00000555405 IGSF11Q5DX21 431 aa8.54□□□□□ -1.04
NEK9-205ENST00000555405 C1QTNF12Q5T7M4 302 aa8.54□□□□□ -1.04
NEK9-205ENST00000555405 Q6P435 159 aa8.54□□□□□ -1.04
NEK9-205ENST00000555405 C17orf107Q6ZR85 190 aa8.54□□□□□ -1.04
NEK9-205ENST00000555405 GINS4Q9BRT9 223 aa8.54□□□□□ -1.04
NEK9-205ENST00000555405 SPACA1Q9HBV2 294 aa8.54□□□□□ -1.04
NEK9-205ENST00000555405 TMEM165Q9HC07 324 aa8.54□□□□□ -1.04
NEK9-205ENST00000555405 NUDT15Q9NV35 164 aa8.54□□□□□ -1.04
NEK9-205ENST00000555405 SLC23A1Q9UHI7 598 aa8.54□□□□□ -1.04
NEK9-205ENST00000555405 A0A0A6YYH2 397 aa8.53□□□□□ -1.04
NEK9-205ENST00000555405 A6NJ64 397 aa8.53□□□□□ -1.04
NEK9-205ENST00000555405 IGFBP2P18065 325 aa8.53□□□□□ -1.04
NEK9-205ENST00000555405 FAUP35544 74 aaKnown RBP8.53□□□□□ -1.04
NEK9-205ENST00000555405 OR3A1P47881 315 aa8.53□□□□□ -1.04
NEK9-205ENST00000555405 ZMYND11Q15326 602 aa8.53□□□□□ -1.04
NEK9-205ENST00000555405 ELP2Q6IA86 826 aa8.53□□□□□ -1.04
NEK9-205ENST00000555405 OR10V1Q8NGI7 309 aa8.53□□□□□ -1.04
NEK9-205ENST00000555405 FBLN5Q9UBX5 448 aa8.53□□□□□ -1.04
NEK9-205ENST00000555405 KLF2Q9Y5W3 355 aaPredicted RBP8.53□□□□□ -1.04
NEK9-205ENST00000555405 LGALS8O00214 317 aa8.53□□□□□ -1.04
NEK9-205ENST00000555405 FCGR3AP08637 254 aa8.53□□□□□ -1.04
NEK9-205ENST00000555405 CSF1P09603 554 aa8.53□□□□□ -1.04
NEK9-205ENST00000555405 TAS2R19P59542 299 aa8.53□□□□□ -1.04
NEK9-205ENST00000555405 MRPS10P82664 201 aaKnown RBP8.53□□□□□ -1.04
NEK9-205ENST00000555405 DAZAP2Q15038 168 aaPredicted RBP8.53□□□□□ -1.04
NEK9-205ENST00000555405 FAM185AQ8N0U4 392 aa8.53□□□□□ -1.04
NEK9-205ENST00000555405 TRAF4Q9BUZ4 470 aaPredicted RBP8.53□□□□□ -1.04
NEK9-205ENST00000555405 ZNF286AQ9HBT8 521 aa8.53□□□□□ -1.04
NEK9-205ENST00000555405 IL2RGP31785 369 aa8.53□□□□□ -1.04
NEK9-205ENST00000555405 ARL6IP1Q15041 203 aa8.53□□□□□ -1.04
NEK9-205ENST00000555405 IDO2Q6ZQW0 420 aa8.53□□□□□ -1.04
NEK9-205ENST00000555405 PPP1R35Q8TAP8 253 aa8.53□□□□□ -1.04
NEK9-205ENST00000555405 SNAPC3Q92966 411 aa8.53□□□□□ -1.04
NEK9-205ENST00000555405 ARL11Q969Q4 196 aa8.53□□□□□ -1.04
NEK9-205ENST00000555405 KIRREL1Q96J84 757 aa8.53□□□□□ -1.04
NEK9-205ENST00000555405 ARPC1BO15143 372 aaKnown RBP8.52□□□□□ -1.05
NEK9-205ENST00000555405 ECDO95905 644 aaPredicted RBP8.52□□□□□ -1.05
NEK9-205ENST00000555405 KNG1P01042 644 aa8.52□□□□□ -1.05
NEK9-205ENST00000555405 RPS2P15880 293 aaKnown RBP8.52□□□□□ -1.05
NEK9-205ENST00000555405 CFPP27918 469 aa8.52□□□□□ -1.05
NEK9-205ENST00000555405 GPR6P46095 362 aaPredicted RBP8.52□□□□□ -1.05
NEK9-205ENST00000555405 IL13RA2Q14627 380 aa8.52□□□□□ -1.05
NEK9-205ENST00000555405 SPIN3Q5JUX0 258 aa8.52□□□□□ -1.05
NEK9-205ENST00000555405 LEAP2Q969E1 77 aa8.52□□□□□ -1.05
NEK9-205ENST00000555405 MARVELD3Q96A59 401 aa8.52□□□□□ -1.05
NEK9-205ENST00000555405 TIMD4Q96H15 378 aa8.52□□□□□ -1.05
NEK9-205ENST00000555405 GPHA2Q96T91 129 aa8.52□□□□□ -1.05
NEK9-205ENST00000555405 TMEM246Q9BRR3 403 aa8.52□□□□□ -1.05
NEK9-205ENST00000555405 DPAGT1Q9H3H5 408 aa8.52□□□□□ -1.05
NEK9-205ENST00000555405 KCNIP1Q9NZI2 227 aa8.52□□□□□ -1.05
NEK9-205ENST00000555405 RNF150Q9ULK6 438 aa8.52□□□□□ -1.05
NEK9-205ENST00000555405 ANKRD20A5PA0PJZ0 165 aa8.52□□□□□ -1.05
NEK9-205ENST00000555405 NKX6-3A6NJ46 265 aa8.52□□□□□ -1.05
NEK9-205ENST00000555405 PTBP1P26599 531 aaKnown RBP eCLIP8.52□□□□□ -1.05
NEK9-205ENST00000555405 DLX1P56177 255 aa8.52□□□□□ -1.05
NEK9-205ENST00000555405 KLF9Q13886 244 aaPredicted RBP8.52□□□□□ -1.05
NEK9-205ENST00000555405 PNLIPRP3Q17RR3 467 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms