RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 TAS2R9Q9NYW1 312 aa3.01□□□□□ -1.93
VRK1-205ENST00000555402 KLF13Q9Y2Y9 288 aaPredicted RBP3.01□□□□□ -1.93
VRK1-205ENST00000555402 TMEM131Q92545 1883 aa3.01□□□□□ -1.93
VRK1-205ENST00000555402 BRWD3Q6RI45 1802 aa3□□□□□ -1.93
VRK1-205ENST00000555402 SIGLEC1Q9BZZ2 1709 aa3□□□□□ -1.93
VRK1-205ENST00000555402 OR2AT4A6NND4 320 aa3□□□□□ -1.93
VRK1-205ENST00000555402 TMEM114B3SHH9 223 aa3□□□□□ -1.93
VRK1-205ENST00000555402 M0QZ92 97 aa3□□□□□ -1.93
VRK1-205ENST00000555402 UPK2O00526 184 aa3□□□□□ -1.93
VRK1-205ENST00000555402 SLC31A1O15431 190 aa3□□□□□ -1.93
VRK1-205ENST00000555402 RGS5O15539 181 aa3□□□□□ -1.93
VRK1-205ENST00000555402 CRXO43186 299 aaPredicted RBP3□□□□□ -1.93
VRK1-205ENST00000555402 MPZL2O60487 215 aa3□□□□□ -1.93
VRK1-205ENST00000555402 SHOX2O60902 331 aaPredicted RBP3□□□□□ -1.93
VRK1-205ENST00000555402 NSA2O95478 260 aaKnown RBP3□□□□□ -1.93
VRK1-205ENST00000555402 CXorf1O96002 111 aa3□□□□□ -1.93
VRK1-205ENST00000555402 NRASP01111 189 aa3□□□□□ -1.93
VRK1-205ENST00000555402 HRASP01112 189 aa3□□□□□ -1.93
VRK1-205ENST00000555402 KRASP01116 189 aa3□□□□□ -1.93
VRK1-205ENST00000555402 RPS17P08708 135 aaKnown RBP3□□□□□ -1.93
VRK1-205ENST00000555402 IDH2P48735 452 aaKnown RBP3□□□□□ -1.93
VRK1-205ENST00000555402 TUFMP49411 452 aaKnown RBP3□□□□□ -1.93
VRK1-205ENST00000555402 NUDT2P50583 147 aa3□□□□□ -1.93
VRK1-205ENST00000555402 NKX2-5P52952 324 aaPredicted RBP3□□□□□ -1.93
VRK1-205ENST00000555402 CCL23P55773 120 aa3□□□□□ -1.93
VRK1-205ENST00000555402 RAB38P57729 211 aa3□□□□□ -1.93
VRK1-205ENST00000555402 GLO1Q04760 184 aa3□□□□□ -1.93
VRK1-205ENST00000555402 CASP8Q14790 479 aa3□□□□□ -1.93
VRK1-205ENST00000555402 ELOCQ15369 112 aa3□□□□□ -1.93
VRK1-205ENST00000555402 TRIP13Q15645 432 aaPredicted RBP3□□□□□ -1.93
VRK1-205ENST00000555402 SNCBQ16143 134 aa3□□□□□ -1.93
VRK1-205ENST00000555402 IMPG1Q17R60 797 aa3□□□□□ -1.93
VRK1-205ENST00000555402 ACTBL2Q562R1 376 aa3□□□□□ -1.93
VRK1-205ENST00000555402 ZNF678Q5SXM1 525 aa3□□□□□ -1.93
VRK1-205ENST00000555402 HBMQ6B0K9 141 aa3□□□□□ -1.93
VRK1-205ENST00000555402 Q8N402 240 aa3□□□□□ -1.93
VRK1-205ENST00000555402 LINC00337Q8N6G1 96 aa3□□□□□ -1.93
VRK1-205ENST00000555402 ZDHHC22Q8N966 263 aa3□□□□□ -1.93
VRK1-205ENST00000555402 OR5H2Q8NGV7 314 aa3□□□□□ -1.93
VRK1-205ENST00000555402 BLNKQ8WV28 456 aa3□□□□□ -1.93
VRK1-205ENST00000555402 NELFBQ8WX92 580 aa3□□□□□ -1.93
VRK1-205ENST00000555402 OTUB2Q96DC9 234 aa3□□□□□ -1.93
VRK1-205ENST00000555402 TRIM45Q9H8W5 580 aaPredicted RBP3□□□□□ -1.93
VRK1-205ENST00000555402 RDH14Q9HBH5 336 aa3□□□□□ -1.93
VRK1-205ENST00000555402 HRASLSQ9HDD0 168 aa3□□□□□ -1.93
VRK1-205ENST00000555402 DIABLOQ9NR28 239 aa3□□□□□ -1.93
VRK1-205ENST00000555402 USH1CQ9Y6N9 552 aa3□□□□□ -1.93
VRK1-205ENST00000555402 SETD1AO15047 1707 aaKnown RBP2.99□□□□□ -1.93
VRK1-205ENST00000555402 TTC21AQ8NDW8 1320 aa2.99□□□□□ -1.93
VRK1-205ENST00000555402 KIR2DS1A0A191URI9 304 aa2.99□□□□□ -1.93
VRK1-205ENST00000555402 LOC389332A0A1B0GUA5 103 aa2.99□□□□□ -1.93
VRK1-205ENST00000555402 RBFOX3A6NFN3 312 aa2.99□□□□□ -1.93
VRK1-205ENST00000555402 H0Y980 276 aa2.99□□□□□ -1.93
VRK1-205ENST00000555402 UPK1AO00322 258 aa2.99□□□□□ -1.93
VRK1-205ENST00000555402 SLC16A4O15374 487 aa2.99□□□□□ -1.93
VRK1-205ENST00000555402 HPGDSO60760 199 aa2.99□□□□□ -1.93
VRK1-205ENST00000555402 ZNF189O75820 626 aaPredicted RBP2.99□□□□□ -1.93
VRK1-205ENST00000555402 IFNA5P01569 189 aa2.99□□□□□ -1.93
VRK1-205ENST00000555402 HLA-AP01891 365 aaKnown RBP2.99□□□□□ -1.93
VRK1-205ENST00000555402 CTXN2P0C2S0 81 aa2.99□□□□□ -1.93
VRK1-205ENST00000555402 LIMS3P0CW19 117 aa2.99□□□□□ -1.93
VRK1-205ENST00000555402 LIMS4P0CW20 117 aa2.99□□□□□ -1.93
VRK1-205ENST00000555402 NQO1P15559 274 aaKnown RBP2.99□□□□□ -1.93
VRK1-205ENST00000555402 PVALBP20472 110 aaPredicted RBP2.99□□□□□ -1.93
VRK1-205ENST00000555402 AQP5P55064 265 aa2.99□□□□□ -1.93
VRK1-205ENST00000555402 RBX1P62877 108 aa2.99□□□□□ -1.93
VRK1-205ENST00000555402 CD164Q04900 197 aa2.99□□□□□ -1.93
VRK1-205ENST00000555402 MGAT3Q09327 533 aa2.99□□□□□ -1.93
VRK1-205ENST00000555402 CEACAM16Q2WEN9 425 aa2.99□□□□□ -1.93
VRK1-205ENST00000555402 PDZD11Q5EBL8 140 aa2.99□□□□□ -1.93
VRK1-205ENST00000555402 DAZ4Q86SG3 579 aaKnown RBP2.99□□□□□ -1.93
VRK1-205ENST00000555402 SGPP2Q8IWX5 399 aa2.99□□□□□ -1.93
VRK1-205ENST00000555402 SLC26A10Q8NG04 563 aa2.99□□□□□ -1.93
VRK1-205ENST00000555402 OR5D18Q8NGL1 313 aa2.99□□□□□ -1.93
VRK1-205ENST00000555402 OR2AE1Q8NHA4 323 aa2.99□□□□□ -1.93
VRK1-205ENST00000555402 KLF14Q8TD94 323 aaPredicted RBP2.99□□□□□ -1.93
VRK1-205ENST00000555402 PPWD1Q96BP3 646 aaKnown RBP2.99□□□□□ -1.93
VRK1-205ENST00000555402 MBOAT7Q96N66 472 aa2.99□□□□□ -1.93
VRK1-205ENST00000555402 HBEGFQ99075 208 aa2.99□□□□□ -1.93
VRK1-205ENST00000555402 ASB7Q9H672 318 aa2.99□□□□□ -1.93
VRK1-205ENST00000555402 DAZ1Q9NQZ3 744 aaKnown RBP2.99□□□□□ -1.93
VRK1-205ENST00000555402 FGFR1OP2Q9NVK5 253 aa2.99□□□□□ -1.93
VRK1-205ENST00000555402 SLC22A7Q9Y694 548 aa2.99□□□□□ -1.93
VRK1-205ENST00000555402 ZNF780BQ9Y6R6 833 aa2.99□□□□□ -1.93
VRK1-205ENST00000555402 RAB3GAP2Q9H2M9 1393 aa2.99□□□□□ -1.93
VRK1-205ENST00000555402 IGHV3OR16-8A0A075B7F1 116 aa2.98□□□□□ -1.93
VRK1-205ENST00000555402 F5H768 121 aa2.98□□□□□ -1.93
VRK1-205ENST00000555402 CDIPTO14735 213 aa2.98□□□□□ -1.93
VRK1-205ENST00000555402 FGF16O43320 207 aa2.98□□□□□ -1.93
VRK1-205ENST00000555402 CYTH3O43739 400 aa2.98□□□□□ -1.93
VRK1-205ENST00000555402 COX7A2P2O60397 106 aa2.98□□□□□ -1.93
VRK1-205ENST00000555402 APOEP02649 317 aa2.98□□□□□ -1.93
VRK1-205ENST00000555402 IGLV7-43P04211 117 aa2.98□□□□□ -1.93
VRK1-205ENST00000555402 ZNF35P13682 527 aa2.98□□□□□ -1.93
VRK1-205ENST00000555402 RPA3P35244 121 aaPredicted RBP2.98□□□□□ -1.93
VRK1-205ENST00000555402 CLDN12P56749 244 aa2.98□□□□□ -1.93
VRK1-205ENST00000555402 MLLT11Q13015 90 aaPredicted RBP2.98□□□□□ -1.93
VRK1-205ENST00000555402 SSX1Q16384 188 aa2.98□□□□□ -1.93
VRK1-205ENST00000555402 ZNF404Q494X3 552 aa2.98□□□□□ -1.93
VRK1-205ENST00000555402 UBE2NLQ5JXB2 153 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms