RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 DYNC1I2Q13409 638 aaKnown RBP2.92□□□□□ -1.94
CKS1BP1-201ENST00000555221 PMVKQ15126 192 aa2.92□□□□□ -1.94
CKS1BP1-201ENST00000555221 KRTAP5-1Q6L8H4 278 aa2.92□□□□□ -1.94
CKS1BP1-201ENST00000555221 NT5DC3Q86UY8 548 aa2.92□□□□□ -1.94
CKS1BP1-201ENST00000555221 DOK4Q8TEW6 326 aa2.92□□□□□ -1.94
CKS1BP1-201ENST00000555221 ZNF721Q8TF20 911 aa2.92□□□□□ -1.94
CKS1BP1-201ENST00000555221 LRRC39Q96DD0 335 aa2.92□□□□□ -1.94
CKS1BP1-201ENST00000555221 YIPF6Q96EC8 236 aa2.92□□□□□ -1.94
CKS1BP1-201ENST00000555221 OR2M4Q96R27 311 aa2.92□□□□□ -1.94
CKS1BP1-201ENST00000555221 LLPHQ9BRT6 129 aaKnown RBP2.92□□□□□ -1.94
CKS1BP1-201ENST00000555221 ZNF649Q9BS31 505 aa2.92□□□□□ -1.94
CKS1BP1-201ENST00000555221 LINC00574Q9H8X3 128 aa2.92□□□□□ -1.94
CKS1BP1-201ENST00000555221 CA10Q9NS85 328 aa2.92□□□□□ -1.94
CKS1BP1-201ENST00000555221 HMGXB4Q9UGU5 601 aa2.92□□□□□ -1.94
CKS1BP1-201ENST00000555221 ELP1O95163 1332 aa2.92□□□□□ -1.94
CKS1BP1-201ENST00000555221 CHD6Q8TD26 2715 aa2.91□□□□□ -1.94
CKS1BP1-201ENST00000555221 AKAP11Q9UKA4 1901 aa2.91□□□□□ -1.94
CKS1BP1-201ENST00000555221 FASNP49327 2511 aaKnown RBP2.91□□□□□ -1.94
CKS1BP1-201ENST00000555221 IGKV1-6A0A0C4DH72 117 aa2.91□□□□□ -1.94
CKS1BP1-201ENST00000555221 TVP23AA6NH52 213 aa2.91□□□□□ -1.94
CKS1BP1-201ENST00000555221 IGKV1-39P01597 117 aa2.91□□□□□ -1.94
CKS1BP1-201ENST00000555221 IGKV1D-39P04432 117 aa2.91□□□□□ -1.94
CKS1BP1-201ENST00000555221 IVLP07476 585 aa2.91□□□□□ -1.94
CKS1BP1-201ENST00000555221 SNRPAP09012 282 aaKnown RBP2.91□□□□□ -1.94
CKS1BP1-201ENST00000555221 LIPCP11150 499 aa2.91□□□□□ -1.94
CKS1BP1-201ENST00000555221 CCL5P13501 91 aa2.91□□□□□ -1.94
CKS1BP1-201ENST00000555221 P2RY2P41231 377 aa2.91□□□□□ -1.94
CKS1BP1-201ENST00000555221 ATP5J2P56134 94 aa2.91□□□□□ -1.94
CKS1BP1-201ENST00000555221 RPL10AP62906 217 aaKnown RBP2.91□□□□□ -1.94
CKS1BP1-201ENST00000555221 IL5RAQ01344 420 aa2.91□□□□□ -1.94
CKS1BP1-201ENST00000555221 ATP5G2Q06055 141 aa2.91□□□□□ -1.94
CKS1BP1-201ENST00000555221 SP6Q3SY56 376 aa2.91□□□□□ -1.94
CKS1BP1-201ENST00000555221 KPRPQ5T749 579 aaPredicted RBP2.91□□□□□ -1.94
CKS1BP1-201ENST00000555221 FAM104BQ5XKR9 115 aa2.91□□□□□ -1.94
CKS1BP1-201ENST00000555221 CLEC19AQ6UXS0 136 aa2.91□□□□□ -1.94
CKS1BP1-201ENST00000555221 TRMT10CQ7L0Y3 403 aaKnown RBP2.91□□□□□ -1.94
CKS1BP1-201ENST00000555221 NELFCDQ8IXH7 590 aa2.91□□□□□ -1.94
CKS1BP1-201ENST00000555221 ZNF420Q8TAQ5 688 aaPredicted RBP2.91□□□□□ -1.94
CKS1BP1-201ENST00000555221 CACNG8Q8WXS5 425 aa2.91□□□□□ -1.94
CKS1BP1-201ENST00000555221 CDKL2Q92772 493 aa2.91□□□□□ -1.94
CKS1BP1-201ENST00000555221 RILPQ96NA2 401 aa2.91□□□□□ -1.94
CKS1BP1-201ENST00000555221 METTL26Q96S19 204 aa2.91□□□□□ -1.94
CKS1BP1-201ENST00000555221 CTRCQ99895 268 aa2.91□□□□□ -1.94
CKS1BP1-201ENST00000555221 PORCNQ9H237 461 aa2.91□□□□□ -1.94
CKS1BP1-201ENST00000555221 SLC38A1Q9H2H9 487 aa2.91□□□□□ -1.94
CKS1BP1-201ENST00000555221 PRORYQ9H606 182 aa2.91□□□□□ -1.94
CKS1BP1-201ENST00000555221 XKR8Q9H6D3 395 aa2.91□□□□□ -1.94
CKS1BP1-201ENST00000555221 SDHAF2Q9NX18 166 aa2.91□□□□□ -1.94
CKS1BP1-201ENST00000555221 STX18Q9P2W9 335 aaKnown RBP2.91□□□□□ -1.94
CKS1BP1-201ENST00000555221 CENPFP49454 3210 aa2.91□□□□□ -1.94
CKS1BP1-201ENST00000555221 KIAA0100Q14667 2235 aaKnown RBP2.91□□□□□ -1.94
CKS1BP1-201ENST00000555221 LAMA2P24043 3122 aaKnown RBP2.9□□□□□ -1.94
CKS1BP1-201ENST00000555221 COL27A1Q8IZC6 1860 aaPredicted RBP2.9□□□□□ -1.94
CKS1BP1-201ENST00000555221 GOLGA6L4A6NEF3 574 aa2.9□□□□□ -1.95
CKS1BP1-201ENST00000555221 C16orf90A8MZG2 172 aa2.9□□□□□ -1.95
CKS1BP1-201ENST00000555221 IGLV7-43P04211 117 aa2.9□□□□□ -1.95
CKS1BP1-201ENST00000555221 HTR2BP41595 481 aa2.9□□□□□ -1.95
CKS1BP1-201ENST00000555221 SLC18A1P54219 525 aa2.9□□□□□ -1.95
CKS1BP1-201ENST00000555221 FLI1Q01543 452 aaPredicted RBP2.9□□□□□ -1.95
CKS1BP1-201ENST00000555221 ZNF678Q5SXM1 525 aa2.9□□□□□ -1.95
CKS1BP1-201ENST00000555221 LRRC8AQ8IWT6 810 aa2.9□□□□□ -1.95
CKS1BP1-201ENST00000555221 ST13P4Q8IZP2 240 aaPredicted RBP2.9□□□□□ -1.95
CKS1BP1-201ENST00000555221 PDCL2Q8N4E4 241 aa2.9□□□□□ -1.95
CKS1BP1-201ENST00000555221 LRRC20Q8TCA0 184 aa2.9□□□□□ -1.95
CKS1BP1-201ENST00000555221 MSANTD3Q96H12 275 aa2.9□□□□□ -1.95
CKS1BP1-201ENST00000555221 SIKE1Q9BRV8 207 aa2.9□□□□□ -1.95
CKS1BP1-201ENST00000555221 MS4A8Q9BY19 250 aa2.9□□□□□ -1.95
CKS1BP1-201ENST00000555221 HAUS4Q9H6D7 363 aa2.9□□□□□ -1.95
CKS1BP1-201ENST00000555221 C11orf49Q9H6J7 331 aa2.9□□□□□ -1.95
CKS1BP1-201ENST00000555221 NRBP2Q9NSY0 501 aa2.9□□□□□ -1.95
CKS1BP1-201ENST00000555221 STMN3Q9NZ72 180 aa2.9□□□□□ -1.95
CKS1BP1-201ENST00000555221 ATP6V1DQ9Y5K8 247 aa2.9□□□□□ -1.95
CKS1BP1-201ENST00000555221 EYSQ5T1H1 3165 aa2.9□□□□□ -1.95
CKS1BP1-201ENST00000555221 LAMA3Q16787 3333 aa2.9□□□□□ -1.95
CKS1BP1-201ENST00000555221 SSC5DA1L4H1 1573 aa2.9□□□□□ -1.95
CKS1BP1-201ENST00000555221 ARAP2Q8WZ64 1704 aa2.9□□□□□ -1.95
CKS1BP1-201ENST00000555221 MYH13Q9UKX3 1938 aa2.89□□□□□ -1.95
CKS1BP1-201ENST00000555221 COL4A1P02462 1669 aa2.89□□□□□ -1.95
CKS1BP1-201ENST00000555221 ECM29Q5VYK3 1845 aa2.89□□□□□ -1.95
CKS1BP1-201ENST00000555221 C2orf16Q68DN1 1984 aa2.89□□□□□ -1.95
CKS1BP1-201ENST00000555221 SLC5A10A0PJK1 596 aa2.89□□□□□ -1.95
CKS1BP1-201ENST00000555221 OR6C70A6NIJ9 312 aa2.89□□□□□ -1.95
CKS1BP1-201ENST00000555221 C9JQL5 133 aa2.89□□□□□ -1.95
CKS1BP1-201ENST00000555221 H3BQV1 296 aa2.89□□□□□ -1.95
CKS1BP1-201ENST00000555221 K7EN84 100 aa2.89□□□□□ -1.95
CKS1BP1-201ENST00000555221 PSMD11O00231 422 aa2.89□□□□□ -1.95
CKS1BP1-201ENST00000555221 CNMDO75829 334 aa2.89□□□□□ -1.95
CKS1BP1-201ENST00000555221 IGHV1-46P01743 117 aa2.89□□□□□ -1.95
CKS1BP1-201ENST00000555221 TPM1P09493 284 aa2.89□□□□□ -1.95
CKS1BP1-201ENST00000555221 CYBAP13498 195 aa2.89□□□□□ -1.95
CKS1BP1-201ENST00000555221 DNASE1L1P49184 302 aa2.89□□□□□ -1.95
CKS1BP1-201ENST00000555221 TGM4P49221 684 aa2.89□□□□□ -1.95
CKS1BP1-201ENST00000555221 NUDT2P50583 147 aa2.89□□□□□ -1.95
CKS1BP1-201ENST00000555221 DSTNP60981 165 aa2.89□□□□□ -1.95
CKS1BP1-201ENST00000555221 RBX1P62877 108 aa2.89□□□□□ -1.95
CKS1BP1-201ENST00000555221 UGT2A3Q6UWM9 527 aa2.89□□□□□ -1.95
CKS1BP1-201ENST00000555221 FAM231DQ6ZW35 169 aa2.89□□□□□ -1.95
CKS1BP1-201ENST00000555221 NAV2Q8IVL1 2488 aa2.89□□□□□ -1.95
CKS1BP1-201ENST00000555221 TRIML2Q8N7C3 387 aa2.89□□□□□ -1.95
CKS1BP1-201ENST00000555221 CCNYL1Q8N7R7 359 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms