RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 FAM168BA1KXE4 195 aa3.56□□□□□ -1.84
VRK1-203ENST00000555067 MYBPHLA2RUH7 354 aa3.56□□□□□ -1.84
VRK1-203ENST00000555067 VGLL3A8MV65 326 aa3.56□□□□□ -1.84
VRK1-203ENST00000555067 EVPLLA8MZ36 301 aa3.56□□□□□ -1.84
VRK1-203ENST00000555067 LAD1O00515 517 aa3.56□□□□□ -1.84
VRK1-203ENST00000555067 CNIH1O95406 144 aa3.56□□□□□ -1.84
VRK1-203ENST00000555067 CXCL3P19876 107 aa3.56□□□□□ -1.84
VRK1-203ENST00000555067 CFL1P23528 166 aaKnown RBP3.56□□□□□ -1.84
VRK1-203ENST00000555067 DTYMKP23919 212 aa3.56□□□□□ -1.84
VRK1-203ENST00000555067 CCR7P32248 378 aa3.56□□□□□ -1.84
VRK1-203ENST00000555067 C1QTNF8P60827 252 aa3.56□□□□□ -1.84
VRK1-203ENST00000555067 MEF2CQ06413 473 aaPredicted RBP3.56□□□□□ -1.84
VRK1-203ENST00000555067 DAZ2Q13117 558 aaKnown RBP3.56□□□□□ -1.84
VRK1-203ENST00000555067 ATP6AP1LQ52LC2 224 aa3.56□□□□□ -1.84
VRK1-203ENST00000555067 CLLU1OSQ5K130 101 aa3.56□□□□□ -1.84
VRK1-203ENST00000555067 HACD4Q5VWC8 232 aa3.56□□□□□ -1.84
VRK1-203ENST00000555067 SPATA31B1PQ5VZV4 182 aa3.56□□□□□ -1.84
VRK1-203ENST00000555067 CLEC20AQ6ZU45 233 aa3.56□□□□□ -1.84
VRK1-203ENST00000555067 GALNT10Q86SR1 603 aa3.56□□□□□ -1.84
VRK1-203ENST00000555067 AKAP14Q86UN6 197 aa3.56□□□□□ -1.84
VRK1-203ENST00000555067 NT5DC3Q86UY8 548 aa3.56□□□□□ -1.84
VRK1-203ENST00000555067 TMEM161BQ8NDZ6 487 aa3.56□□□□□ -1.84
VRK1-203ENST00000555067 OR4M2Q8NGB6 313 aa3.56□□□□□ -1.84
VRK1-203ENST00000555067 OR4M1Q8NGD0 313 aa3.56□□□□□ -1.84
VRK1-203ENST00000555067 OR6K3Q8NGY3 331 aa3.56□□□□□ -1.84
VRK1-203ENST00000555067 OR1P1Q8NH06 330 aa3.56□□□□□ -1.84
VRK1-203ENST00000555067 EEF1AKMT1Q8WVE0 214 aa3.56□□□□□ -1.84
VRK1-203ENST00000555067 ASB17Q8WXJ9 295 aa3.56□□□□□ -1.84
VRK1-203ENST00000555067 DAZ3Q9NR90 486 aaKnown RBP3.56□□□□□ -1.84
VRK1-203ENST00000555067 ARL2BPQ9Y2Y0 163 aa3.56□□□□□ -1.84
VRK1-203ENST00000555067 PCF11O94913 1555 aaKnown RBP3.55□□□□□ -1.84
VRK1-203ENST00000555067 ZNFX1Q9P2E3 1918 aaKnown RBP3.55□□□□□ -1.84
VRK1-203ENST00000555067 IGKV6-21A0A0C4DH24 114 aa3.55□□□□□ -1.84
VRK1-203ENST00000555067 SMIM9A6NGZ8 99 aa3.55□□□□□ -1.84
VRK1-203ENST00000555067 OR5K4A6NMS3 321 aa3.55□□□□□ -1.84
VRK1-203ENST00000555067 CIAO1O76071 339 aa3.55□□□□□ -1.84
VRK1-203ENST00000555067 CXCL2P19875 107 aa3.55□□□□□ -1.84
VRK1-203ENST00000555067 ALOX5APP20292 161 aa3.55□□□□□ -1.84
VRK1-203ENST00000555067 MIPP30301 263 aa3.55□□□□□ -1.84
VRK1-203ENST00000555067 NUDT1P36639 197 aa3.55□□□□□ -1.84
VRK1-203ENST00000555067 SULT1A1P50225 295 aa3.55□□□□□ -1.84
VRK1-203ENST00000555067 SULT1A2P50226 295 aa3.55□□□□□ -1.84
VRK1-203ENST00000555067 SKP2Q13309 424 aa3.55□□□□□ -1.84
VRK1-203ENST00000555067 C1DQ13901 141 aaKnown RBP3.55□□□□□ -1.84
VRK1-203ENST00000555067 MPV17L2Q567V2 206 aa3.55□□□□□ -1.84
VRK1-203ENST00000555067 C6orf120Q7Z4R8 191 aa3.55□□□□□ -1.84
VRK1-203ENST00000555067 OR6V1Q8N148 313 aa3.55□□□□□ -1.84
VRK1-203ENST00000555067 ENKURQ8TC29 256 aa3.55□□□□□ -1.84
VRK1-203ENST00000555067 DTD1Q8TEA8 209 aa3.55□□□□□ -1.84
VRK1-203ENST00000555067 PRSS27Q9BQR3 290 aa3.55□□□□□ -1.84
VRK1-203ENST00000555067 ZNF649Q9BS31 505 aa3.55□□□□□ -1.84
VRK1-203ENST00000555067 EBPLQ9BY08 206 aa3.55□□□□□ -1.84
VRK1-203ENST00000555067 PECRQ9BY49 303 aa3.55□□□□□ -1.84
VRK1-203ENST00000555067 FGF23Q9GZV9 251 aaPredicted RBP3.55□□□□□ -1.84
VRK1-203ENST00000555067 OR52D1Q9H346 318 aa3.55□□□□□ -1.84
VRK1-203ENST00000555067 CENPHQ9H3R5 247 aa3.55□□□□□ -1.84
VRK1-203ENST00000555067 WFDC1Q9HC57 220 aa3.55□□□□□ -1.84
VRK1-203ENST00000555067 ZNF225Q9UK10 706 aa3.55□□□□□ -1.84
VRK1-203ENST00000555067 TSPOAP1O95153 1857 aa3.55□□□□□ -1.84
VRK1-203ENST00000555067 TDRD6O60522 2096 aaKnown RBP3.55□□□□□ -1.84
VRK1-203ENST00000555067 MIA3Q5JRA6 1907 aa3.54□□□□□ -1.84
VRK1-203ENST00000555067 A0A0U1RQV1 116 aa3.54□□□□□ -1.84
VRK1-203ENST00000555067 CLDN24A6NM45 220 aa3.54□□□□□ -1.84
VRK1-203ENST00000555067 H0YJX3 145 aa3.54□□□□□ -1.84
VRK1-203ENST00000555067 GCM2O75603 506 aaPredicted RBP3.54□□□□□ -1.84
VRK1-203ENST00000555067 ARL6IP5O75915 188 aa3.54□□□□□ -1.84
VRK1-203ENST00000555067 REG1AP05451 166 aa3.54□□□□□ -1.84
VRK1-203ENST00000555067 IGHV4-34P06331 123 aa3.54□□□□□ -1.84
VRK1-203ENST00000555067 OR4Q2P0C623 313 aa3.54□□□□□ -1.84
VRK1-203ENST00000555067 OR4E1P0C645 316 aa3.54□□□□□ -1.84
VRK1-203ENST00000555067 LINC00614P0C842 121 aa3.54□□□□□ -1.84
VRK1-203ENST00000555067 CECR9P0C854 216 aa3.54□□□□□ -1.84
VRK1-203ENST00000555067 MYL12AP19105 171 aa3.54□□□□□ -1.84
VRK1-203ENST00000555067 PRTN3P24158 256 aa3.54□□□□□ -1.84
VRK1-203ENST00000555067 CBX5P45973 191 aa3.54□□□□□ -1.84
VRK1-203ENST00000555067 REG1BP48304 166 aa3.54□□□□□ -1.84
VRK1-203ENST00000555067 HSPA13P48723 471 aa3.54□□□□□ -1.84
VRK1-203ENST00000555067 UBE2AP49459 152 aa3.54□□□□□ -1.84
VRK1-203ENST00000555067 GTF2BQ00403 316 aa3.54□□□□□ -1.84
VRK1-203ENST00000555067 RSU1Q15404 277 aa3.54□□□□□ -1.84
VRK1-203ENST00000555067 SPA17Q15506 151 aa3.54□□□□□ -1.84
VRK1-203ENST00000555067 SLC9A3R2Q15599 337 aa3.54□□□□□ -1.84
VRK1-203ENST00000555067 OR10K2Q6IF99 312 aa3.54□□□□□ -1.84
VRK1-203ENST00000555067 FAM131AQ6UXB0 335 aa3.54□□□□□ -1.84
VRK1-203ENST00000555067 NIT1Q86X76 327 aa3.54□□□□□ -1.84
VRK1-203ENST00000555067 CLDN22Q8N7P3 220 aa3.54□□□□□ -1.84
VRK1-203ENST00000555067 PXT1Q8NFP0 134 aa3.54□□□□□ -1.84
VRK1-203ENST00000555067 OR10D3Q8NH80 312 aa3.54□□□□□ -1.84
VRK1-203ENST00000555067 SPPL2BQ8TCT7 592 aa3.54□□□□□ -1.84
VRK1-203ENST00000555067 C15orf40Q8WUR7 153 aa3.54□□□□□ -1.84
VRK1-203ENST00000555067 TAMM41Q96BW9 452 aa3.54□□□□□ -1.84
VRK1-203ENST00000555067 IMP4Q96G21 291 aaKnown RBP3.54□□□□□ -1.84
VRK1-203ENST00000555067 CEP19Q96LK0 163 aa3.54□□□□□ -1.84
VRK1-203ENST00000555067 PRRT1Q99946 306 aa3.54□□□□□ -1.84
VRK1-203ENST00000555067 RTBDNQ9BSG5 229 aaPredicted RBP3.54□□□□□ -1.84
VRK1-203ENST00000555067 ULBP1Q9BZM6 244 aa3.54□□□□□ -1.84
VRK1-203ENST00000555067 ZNF436Q9C0F3 470 aaPredicted RBP3.54□□□□□ -1.84
VRK1-203ENST00000555067 PLEKHF2Q9H8W4 249 aa3.54□□□□□ -1.84
VRK1-203ENST00000555067 PLSCR3Q9NRY6 295 aa3.54□□□□□ -1.84
VRK1-203ENST00000555067 DKKL1Q9UK85 242 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms