RNA–Protein interactions for RNA: ENST00000554997.1

SYNE2-215, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 711 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-215ENST00000554997 KCNK7Q9Y2U2 307 aa8.45□□□□□ -1.06
SYNE2-215ENST00000554997 AKAP9Q99996 3911 aa8.45□□□□□ -1.06
SYNE2-215ENST00000554997 PRRC2AP48634 2157 aaKnown RBP8.44□□□□□ -1.06
SYNE2-215ENST00000554997 TRAV18A0A075B6X5 111 aa8.44□□□□□ -1.06
SYNE2-215ENST00000554997 PPIAL4CA0A0B4J2A2 164 aa8.44□□□□□ -1.06
SYNE2-215ENST00000554997 KIR2DS1A0A191URI9 304 aa8.44□□□□□ -1.06
SYNE2-215ENST00000554997 UBE2QL1A1L167 161 aa8.44□□□□□ -1.06
SYNE2-215ENST00000554997 KIAA1324LA8MWY0 1029 aaPredicted RBP8.44□□□□□ -1.06
SYNE2-215ENST00000554997 A8MXK9 166 aa8.44□□□□□ -1.06
SYNE2-215ENST00000554997 FAM25AB3EWG3 89 aa8.44□□□□□ -1.06
SYNE2-215ENST00000554997 FAM25CB3EWG5 89 aa8.44□□□□□ -1.06
SYNE2-215ENST00000554997 FAM25GB3EWG6 89 aa8.44□□□□□ -1.06
SYNE2-215ENST00000554997 H7C1Q1 480 aa8.44□□□□□ -1.06
SYNE2-215ENST00000554997 PHF1O43189 567 aaPredicted RBP8.44□□□□□ -1.06
SYNE2-215ENST00000554997 MT-ND4P03905 459 aa8.44□□□□□ -1.06
SYNE2-215ENST00000554997 EIF4EP06730 217 aaKnown RBP8.44□□□□□ -1.06
SYNE2-215ENST00000554997 LIPFP07098 398 aa8.44□□□□□ -1.06
SYNE2-215ENST00000554997 MELTFP08582 738 aa8.44□□□□□ -1.06
SYNE2-215ENST00000554997 CDK2P24941 298 aa8.44□□□□□ -1.06
SYNE2-215ENST00000554997 P2RX3P56373 397 aa8.44□□□□□ -1.06
SYNE2-215ENST00000554997 MEF2CQ06413 473 aaPredicted RBP8.44□□□□□ -1.06
SYNE2-215ENST00000554997 TMEM249Q2WGJ8 235 aa8.44□□□□□ -1.06
SYNE2-215ENST00000554997 ZNF260Q3ZCT1 412 aa8.44□□□□□ -1.06
SYNE2-215ENST00000554997 KRBOX4Q5JUW0 171 aa8.44□□□□□ -1.06
SYNE2-215ENST00000554997 NKAPLQ5M9Q1 402 aa8.44□□□□□ -1.06
SYNE2-215ENST00000554997 RSBN1Q5VWQ0 802 aaPredicted RBP8.44□□□□□ -1.06
SYNE2-215ENST00000554997 TMEM200BQ69YZ2 307 aa8.44□□□□□ -1.06
SYNE2-215ENST00000554997 GAPTQ8N292 157 aa8.44□□□□□ -1.06
SYNE2-215ENST00000554997 FGFRL1Q8N441 504 aa8.44□□□□□ -1.06
SYNE2-215ENST00000554997 ZNF565Q8N9K5 539 aa8.44□□□□□ -1.06
SYNE2-215ENST00000554997 LINC01356Q8N9X3 169 aa8.44□□□□□ -1.06
SYNE2-215ENST00000554997 LY6G5BQ8NDX9 201 aa8.44□□□□□ -1.06
SYNE2-215ENST00000554997 C8orf46Q8TAG6 207 aa8.44□□□□□ -1.06
SYNE2-215ENST00000554997 CORO2AQ92828 525 aa8.44□□□□□ -1.06
SYNE2-215ENST00000554997 SULT4A1Q9BR01 284 aa8.44□□□□□ -1.06
SYNE2-215ENST00000554997 RIMS4Q9H426 269 aaPredicted RBP8.44□□□□□ -1.06
SYNE2-215ENST00000554997 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.44□□□□□ -1.06
SYNE2-215ENST00000554997 ETAA1Q9NY74 926 aa8.44□□□□□ -1.06
SYNE2-215ENST00000554997 ADAM30Q9UKF2 790 aa8.44□□□□□ -1.06
SYNE2-215ENST00000554997 TRBV23-1A0A0A0MS06 115 aa8.43□□□□□ -1.06
SYNE2-215ENST00000554997 hADV38S2A0JD32 116 aa8.43□□□□□ -1.06
SYNE2-215ENST00000554997 SERPINE3A8MV23 424 aa8.43□□□□□ -1.06
SYNE2-215ENST00000554997 MFNGO00587 321 aa8.43□□□□□ -1.06
SYNE2-215ENST00000554997 HSPB6O14558 160 aa8.43□□□□□ -1.06
SYNE2-215ENST00000554997 CLPXO76031 633 aa8.43□□□□□ -1.06
SYNE2-215ENST00000554997 GSTP1P09211 210 aaKnown RBP8.43□□□□□ -1.06
SYNE2-215ENST00000554997 IGHV4-31P0DP07 118 aa8.43□□□□□ -1.06
SYNE2-215ENST00000554997 HIST1H1DP16402 221 aaKnown RBP8.43□□□□□ -1.06
SYNE2-215ENST00000554997 GNB3P16520 340 aa8.43□□□□□ -1.06
SYNE2-215ENST00000554997 GZMHP20718 246 aa8.43□□□□□ -1.06
SYNE2-215ENST00000554997 TNFSF8P32971 234 aa8.43□□□□□ -1.06
SYNE2-215ENST00000554997 S100A5P33763 92 aa8.43□□□□□ -1.06
SYNE2-215ENST00000554997 GLIPR1P48060 266 aa8.43□□□□□ -1.06
SYNE2-215ENST00000554997 GZMKP49863 264 aa8.43□□□□□ -1.06
SYNE2-215ENST00000554997 EDDM3BP56851 147 aa8.43□□□□□ -1.06
SYNE2-215ENST00000554997 RPL31P62899 125 aaKnown RBP8.43□□□□□ -1.06
SYNE2-215ENST00000554997 LCN2P80188 198 aa8.43□□□□□ -1.06
SYNE2-215ENST00000554997 PAX2Q02962 417 aa8.43□□□□□ -1.06
SYNE2-215ENST00000554997 ATXN7L3Q14CW9 347 aaPredicted RBP8.43□□□□□ -1.06
SYNE2-215ENST00000554997 PNLIPRP3Q17RR3 467 aa8.43□□□□□ -1.06
SYNE2-215ENST00000554997 CR1LQ2VPA4 569 aa8.43□□□□□ -1.06
SYNE2-215ENST00000554997 HACD4Q5VWC8 232 aa8.43□□□□□ -1.06
SYNE2-215ENST00000554997 CYB5R2Q6BCY4 276 aa8.43□□□□□ -1.06
SYNE2-215ENST00000554997 ZNF497Q6ZNH5 498 aa8.43□□□□□ -1.06
SYNE2-215ENST00000554997 LINC00299Q6ZSB3 139 aa8.43□□□□□ -1.06
SYNE2-215ENST00000554997 LAX1Q8IWV1 398 aa8.43□□□□□ -1.06
SYNE2-215ENST00000554997 MAPK1IP1LQ8NDC0 245 aa8.43□□□□□ -1.06
SYNE2-215ENST00000554997 OR4M1Q8NGD0 313 aa8.43□□□□□ -1.06
SYNE2-215ENST00000554997 PLPPR1Q8TBJ4 325 aa8.43□□□□□ -1.06
SYNE2-215ENST00000554997 NEK7Q8TDX7 302 aa8.43□□□□□ -1.06
SYNE2-215ENST00000554997 C15orf40Q8WUR7 153 aa8.43□□□□□ -1.06
SYNE2-215ENST00000554997 H1FXQ92522 213 aaKnown RBP8.43□□□□□ -1.06
SYNE2-215ENST00000554997 MSI2Q96DH6 328 aaKnown RBP8.43□□□□□ -1.06
SYNE2-215ENST00000554997 COQ2Q96H96 371 aa8.43□□□□□ -1.06
SYNE2-215ENST00000554997 C18orf12Q96KH6 178 aa8.43□□□□□ -1.06
SYNE2-215ENST00000554997 ZMAT3Q9HA38 289 aaKnown RBP8.43□□□□□ -1.06
SYNE2-215ENST00000554997 LPAR3Q9UBY5 353 aa8.43□□□□□ -1.06
SYNE2-215ENST00000554997 AK3Q9UIJ7 227 aa8.43□□□□□ -1.06
SYNE2-215ENST00000554997 RPUSD1Q9UJJ7 312 aaKnown RBP8.43□□□□□ -1.06
SYNE2-215ENST00000554997 MEIKINA0A087WXM9 373 aa8.42□□□□□ -1.06
SYNE2-215ENST00000554997 TRBV6-6A0A0A6YYG2 114 aa8.42□□□□□ -1.06
SYNE2-215ENST00000554997 TMEM30CPA0ZSE6 113 aa8.42□□□□□ -1.06
SYNE2-215ENST00000554997 ODAMA1E959 279 aa8.42□□□□□ -1.06
SYNE2-215ENST00000554997 NAPSAO96009 420 aa8.42□□□□□ -1.06
SYNE2-215ENST00000554997 TGFAP01135 160 aa8.42□□□□□ -1.06
SYNE2-215ENST00000554997 HLA-DQB1P01920 261 aa8.42□□□□□ -1.06
SYNE2-215ENST00000554997 MSMBP08118 114 aa8.42□□□□□ -1.06
SYNE2-215ENST00000554997 PPIAL4GP0DN37 164 aa8.42□□□□□ -1.06
SYNE2-215ENST00000554997 CGB3P0DN86 165 aa8.42□□□□□ -1.06
SYNE2-215ENST00000554997 CGB7P0DN87 165 aa8.42□□□□□ -1.06
SYNE2-215ENST00000554997 FOSL1P15407 271 aa8.42□□□□□ -1.06
SYNE2-215ENST00000554997 TALDO1P37837 337 aa8.42□□□□□ -1.06
SYNE2-215ENST00000554997 MNDAP41218 407 aa8.42□□□□□ -1.06
SYNE2-215ENST00000554997 PITPNAQ00169 270 aa8.42□□□□□ -1.06
SYNE2-215ENST00000554997 EDDM3AQ14507 147 aa8.42□□□□□ -1.06
SYNE2-215ENST00000554997 TMEM69Q5SWH9 247 aa8.42□□□□□ -1.06
SYNE2-215ENST00000554997 OLFML2AQ68BL7 652 aa8.42□□□□□ -1.06
SYNE2-215ENST00000554997 C1orf122Q6ZSJ8 110 aa8.42□□□□□ -1.06
SYNE2-215ENST00000554997 TPRX1Q8N7U7 411 aa8.42□□□□□ -1.06
SYNE2-215ENST00000554997 DTX3Q8N9I9 347 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms