RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 DACT3Q96B18 629 aaPredicted RBP13.61□□□□□ -0.23
SPTLC2-203ENST00000554901 TMUB1Q9BVT8 246 aa13.61□□□□□ -0.23
SPTLC2-203ENST00000554901 MMP27Q9H306 513 aa13.61□□□□□ -0.23
SPTLC2-203ENST00000554901 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.61□□□□□ -0.23
SPTLC2-203ENST00000554901 ZNF581Q9P0T4 197 aa13.61□□□□□ -0.23
SPTLC2-203ENST00000554901 RPUSD1Q9UJJ7 312 aaKnown RBP13.61□□□□□ -0.23
SPTLC2-203ENST00000554901 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.6□□□□□ -0.232e-6■■□□□ 13.9
SPTLC2-203ENST00000554901 SERPINE3A8MV23 424 aa13.6□□□□□ -0.23
SPTLC2-203ENST00000554901 RPL31P62899 125 aaKnown RBP13.6□□□□□ -0.23
SPTLC2-203ENST00000554901 LCN2P80188 198 aa13.6□□□□□ -0.23
SPTLC2-203ENST00000554901 PAX2Q02962 417 aa13.6□□□□□ -0.23
SPTLC2-203ENST00000554901 NKAPLQ5M9Q1 402 aa13.6□□□□□ -0.23
SPTLC2-203ENST00000554901 SLC35E4Q6ICL7 350 aa13.6□□□□□ -0.23
SPTLC2-203ENST00000554901 C6orf201Q7Z4U5 140 aa13.6□□□□□ -0.23
SPTLC2-203ENST00000554901 BIVMQ86UB2 503 aa13.6□□□□□ -0.23
SPTLC2-203ENST00000554901 CMTM4Q8IZR5 234 aa13.6□□□□□ -0.23
SPTLC2-203ENST00000554901 GAPTQ8N292 157 aa13.6□□□□□ -0.23
SPTLC2-203ENST00000554901 BPIFB2Q8N4F0 458 aa13.6□□□□□ -0.23
SPTLC2-203ENST00000554901 LY6G5BQ8NDX9 201 aa13.6□□□□□ -0.23
SPTLC2-203ENST00000554901 MCFD2Q8NI22 146 aa13.6□□□□□ -0.23
SPTLC2-203ENST00000554901 NEK7Q8TDX7 302 aa13.6□□□□□ -0.23
SPTLC2-203ENST00000554901 H1FXQ92522 213 aaKnown RBP13.6□□□□□ -0.23
SPTLC2-203ENST00000554901 MSI2Q96DH6 328 aaKnown RBP13.6□□□□□ -0.23
SPTLC2-203ENST00000554901 ADAM30Q9UKF2 790 aa13.6□□□□□ -0.23
SPTLC2-203ENST00000554901 CR1P17927 2039 aa13.6□□□□□ -0.23
SPTLC2-203ENST00000554901 DOCK11Q5JSL3 2073 aa13.6□□□□□ -0.23
SPTLC2-203ENST00000554901 A0A1W2PPH5 198 aa13.59□□□□□ -0.23
SPTLC2-203ENST00000554901 hADV38S2A0JD32 116 aa13.59□□□□□ -0.23
SPTLC2-203ENST00000554901 HSPB6O14558 160 aa13.59□□□□□ -0.23
SPTLC2-203ENST00000554901 SMAD7O15105 426 aaKnown RBP13.59□□□□□ -0.23
SPTLC2-203ENST00000554901 INHBBP09529 407 aa13.59□□□□□ -0.23
SPTLC2-203ENST00000554901 CD99P14209 185 aa13.59□□□□□ -0.23
SPTLC2-203ENST00000554901 HIST1H1DP16402 221 aaKnown RBP13.59□□□□□ -0.23
SPTLC2-203ENST00000554901 DVL1P1P54792 670 aaPredicted RBP13.59□□□□□ -0.23
SPTLC2-203ENST00000554901 EDDM3BP56851 147 aa13.59□□□□□ -0.23
SPTLC2-203ENST00000554901 AESQ08117 197 aa13.59□□□□□ -0.23
SPTLC2-203ENST00000554901 ATXN7L3Q14CW9 347 aaPredicted RBP13.59□□□□□ -0.23
SPTLC2-203ENST00000554901 MOGAT2Q3SYC2 334 aa13.59□□□□□ -0.23
SPTLC2-203ENST00000554901 KRBOX4Q5JUW0 171 aa13.59□□□□□ -0.23
SPTLC2-203ENST00000554901 RSBN1Q5VWQ0 802 aaPredicted RBP13.59□□□□□ -0.23
SPTLC2-203ENST00000554901 ZNF497Q6ZNH5 498 aa13.59□□□□□ -0.23
SPTLC2-203ENST00000554901 GLCCI1Q86VQ1 547 aa13.59□□□□□ -0.23
SPTLC2-203ENST00000554901 TMEM186Q96B77 213 aa13.59□□□□□ -0.23
SPTLC2-203ENST00000554901 COQ2Q96H96 371 aa13.59□□□□□ -0.23
SPTLC2-203ENST00000554901 ARHGAP5-AS1Q96IT6 56 aa13.59□□□□□ -0.23
SPTLC2-203ENST00000554901 SULT4A1Q9BR01 284 aa13.59□□□□□ -0.23
SPTLC2-203ENST00000554901 PECRQ9BY49 303 aa13.59□□□□□ -0.23
SPTLC2-203ENST00000554901 RIMS4Q9H426 269 aaPredicted RBP13.59□□□□□ -0.23
SPTLC2-203ENST00000554901 ETAA1Q9NY74 926 aa13.59□□□□□ -0.23
SPTLC2-203ENST00000554901 OR6C3Q9NZP0 311 aa13.59□□□□□ -0.23
SPTLC2-203ENST00000554901 ABCA2Q9BZC7 2435 aa13.59□□□□□ -0.23
SPTLC2-203ENST00000554901 IGHV2-70DA0A0C4DH43 119 aa13.59□□□□□ -0.23
SPTLC2-203ENST00000554901 KIR2DS1A0A191URI9 304 aa13.59□□□□□ -0.23
SPTLC2-203ENST00000554901 TMEM30CPA0ZSE6 113 aa13.59□□□□□ -0.23
SPTLC2-203ENST00000554901 C22orf46C9J442 243 aa13.59□□□□□ -0.23
SPTLC2-203ENST00000554901 MFNGO00587 321 aa13.59□□□□□ -0.23
SPTLC2-203ENST00000554901 XRCC3O43542 346 aa13.59□□□□□ -0.23
SPTLC2-203ENST00000554901 HPGDSO60760 199 aa13.59□□□□□ -0.23
SPTLC2-203ENST00000554901 TPPPO94811 219 aa13.59□□□□□ -0.23
SPTLC2-203ENST00000554901 GSTP1P09211 210 aaKnown RBP13.59□□□□□ -0.23
SPTLC2-203ENST00000554901 EDDM3AQ14507 147 aa13.59□□□□□ -0.23
SPTLC2-203ENST00000554901 PLAC9Q5JTB6 97 aa13.59□□□□□ -0.23
SPTLC2-203ENST00000554901 BTNL3Q6UXE8 466 aa13.59□□□□□ -0.23
SPTLC2-203ENST00000554901 FGFRL1Q8N441 504 aa13.59□□□□□ -0.23
SPTLC2-203ENST00000554901 CORO2AQ92828 525 aa13.59□□□□□ -0.23
SPTLC2-203ENST00000554901 FAAP24Q9BTP7 215 aa13.59□□□□□ -0.23
SPTLC2-203ENST00000554901 LINC00312Q9Y6C7 94 aa13.59□□□□□ -0.23
SPTLC2-203ENST00000554901 ODAMA1E959 279 aa13.58□□□□□ -0.24
SPTLC2-203ENST00000554901 RGS5O15539 181 aa13.58□□□□□ -0.24
SPTLC2-203ENST00000554901 TGFAP01135 160 aa13.58□□□□□ -0.24
SPTLC2-203ENST00000554901 PPIAL4GP0DN37 164 aa13.58□□□□□ -0.24
SPTLC2-203ENST00000554901 CDK2P24941 298 aa13.58□□□□□ -0.24
SPTLC2-203ENST00000554901 BRICD5Q6PL45 260 aa13.58□□□□□ -0.24
SPTLC2-203ENST00000554901 METAP1DQ6UB28 335 aaPredicted RBP13.58□□□□□ -0.24
SPTLC2-203ENST00000554901 KIR3DL3Q8N743 410 aa13.58□□□□□ -0.24
SPTLC2-203ENST00000554901 ZNF565Q8N9K5 539 aa13.58□□□□□ -0.24
SPTLC2-203ENST00000554901 PLPPR1Q8TBJ4 325 aa13.58□□□□□ -0.24
SPTLC2-203ENST00000554901 C6orf62Q9GZU0 229 aaPredicted RBP13.58□□□□□ -0.24
SPTLC2-203ENST00000554901 C19orf12Q9NSK7 152 aa13.58□□□□□ -0.24
SPTLC2-203ENST00000554901 UBE2J1Q9Y385 318 aaPredicted RBP13.58□□□□□ -0.24
SPTLC2-203ENST00000554901 INSIG2Q9Y5U4 225 aa13.58□□□□□ -0.24
SPTLC2-203ENST00000554901 YLPM1P49750 1951 aaKnown RBP13.57□□□□□ -0.24
SPTLC2-203ENST00000554901 ACANP16112 2415 aa13.57□□□□□ -0.24
SPTLC2-203ENST00000554901 TRGV10A0A0A0MS01 117 aa13.57□□□□□ -0.24
SPTLC2-203ENST00000554901 A0A0G2JMP0 313 aa13.57□□□□□ -0.24
SPTLC2-203ENST00000554901 A0A0X1KG70 313 aa13.57□□□□□ -0.24
SPTLC2-203ENST00000554901 A0A1W2PQ09 198 aa13.57□□□□□ -0.24
SPTLC2-203ENST00000554901 UBE2QL1A1L167 161 aa13.57□□□□□ -0.24
SPTLC2-203ENST00000554901 J3QLI3 93 aa13.57□□□□□ -0.24
SPTLC2-203ENST00000554901 CTDSP2O14595 271 aa13.57□□□□□ -0.24
SPTLC2-203ENST00000554901 CD5LO43866 347 aa13.57□□□□□ -0.24
SPTLC2-203ENST00000554901 MT-ND4P03905 459 aa13.57□□□□□ -0.24
SPTLC2-203ENST00000554901 EIF4EP06730 217 aaKnown RBP13.57□□□□□ -0.24
SPTLC2-203ENST00000554901 ELK1P19419 428 aa13.57□□□□□ -0.24
SPTLC2-203ENST00000554901 TALDO1P37837 337 aa13.57□□□□□ -0.24
SPTLC2-203ENST00000554901 GLIPR1P48060 266 aa13.57□□□□□ -0.24
SPTLC2-203ENST00000554901 PITPNAQ00169 270 aa13.57□□□□□ -0.24
SPTLC2-203ENST00000554901 PNLIPRP3Q17RR3 467 aa13.57□□□□□ -0.24
SPTLC2-203ENST00000554901 CR1LQ2VPA4 569 aa13.57□□□□□ -0.24
SPTLC2-203ENST00000554901 CDNFQ49AH0 187 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms