RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 UBE2V1Q13404 147 aa13.6□□□□□ -0.23
SYNE3-203ENST00000554873 TMEM187Q14656 261 aa13.6□□□□□ -0.23
SYNE3-203ENST00000554873 LYZL2Q7Z4W2 148 aa13.6□□□□□ -0.23
SYNE3-203ENST00000554873 CYYR1Q96J86 154 aa13.6□□□□□ -0.23
SYNE3-203ENST00000554873 MTIF3Q9H2K0 278 aaKnown RBP13.6□□□□□ -0.23
SYNE3-203ENST00000554873 GLRX2Q9NS18 164 aa13.6□□□□□ -0.23
SYNE3-203ENST00000554873 MRPS28Q9Y2Q9 187 aaKnown RBP13.6□□□□□ -0.23
SYNE3-203ENST00000554873 CPAMD8Q8IZJ3 1885 aa13.6□□□□□ -0.23
SYNE3-203ENST00000554873 MAP1LC3B2A6NCE7 125 aa13.59□□□□□ -0.23
SYNE3-203ENST00000554873 YPEL1O60688 119 aa13.59□□□□□ -0.23
SYNE3-203ENST00000554873 RAC2P15153 192 aa13.59□□□□□ -0.23
SYNE3-203ENST00000554873 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.59□□□□□ -0.23
SYNE3-203ENST00000554873 LYG1Q8N1E2 194 aa13.59□□□□□ -0.23
SYNE3-203ENST00000554873 CISD2Q8N5K1 135 aaKnown RBP13.59□□□□□ -0.23
SYNE3-203ENST00000554873 OR10S1Q8NGN2 331 aa13.59□□□□□ -0.23
SYNE3-203ENST00000554873 ADAT3Q96EY9 351 aaPredicted RBP13.59□□□□□ -0.23
SYNE3-203ENST00000554873 YPEL2Q96QA6 119 aa13.59□□□□□ -0.23
SYNE3-203ENST00000554873 MAP1LC3BQ9GZQ8 125 aa13.59□□□□□ -0.23
SYNE3-203ENST00000554873 BANF2Q9H503 90 aa13.59□□□□□ -0.23
SYNE3-203ENST00000554873 CENPMQ9NSP4 180 aa13.59□□□□□ -0.23
SYNE3-203ENST00000554873 OR6C3Q9NZP0 311 aa13.59□□□□□ -0.23
SYNE3-203ENST00000554873 RNF150Q9ULK6 438 aa13.59□□□□□ -0.23
SYNE3-203ENST00000554873 IGKV3D-11A0A0A0MRZ8 115 aa13.59□□□□□ -0.23
SYNE3-203ENST00000554873 A0A1W2PQD3 144 aa13.59□□□□□ -0.23
SYNE3-203ENST00000554873 FAM24AA6NFZ4 105 aa13.59□□□□□ -0.23
SYNE3-203ENST00000554873 EPOPA6NHQ4 379 aa13.59□□□□□ -0.23
SYNE3-203ENST00000554873 HSBP1L1C9JCN9 74 aa13.59□□□□□ -0.23
SYNE3-203ENST00000554873 MPV17LQ2QL34 196 aa13.59□□□□□ -0.23
SYNE3-203ENST00000554873 TDRG1Q3Y452 100 aa13.59□□□□□ -0.23
SYNE3-203ENST00000554873 OR5D14Q8NGL3 314 aa13.59□□□□□ -0.23
SYNE3-203ENST00000554873 MOB3AQ96BX8 217 aa13.59□□□□□ -0.23
SYNE3-203ENST00000554873 P2RX4Q99571 388 aa13.59□□□□□ -0.23
SYNE3-203ENST00000554873 IGKV1D-43A0A0B4J1Z2 117 aa13.59□□□□□ -0.23
SYNE3-203ENST00000554873 TRAV39A0A0B4J263 110 aa13.59□□□□□ -0.23
SYNE3-203ENST00000554873 PRSS47A8MTI9 375 aa13.59□□□□□ -0.23
SYNE3-203ENST00000554873 H7BYZ3 331 aa13.59□□□□□ -0.23
SYNE3-203ENST00000554873 UCP3P55916 312 aa13.59□□□□□ -0.23
SYNE3-203ENST00000554873 PLCXD2Q0VAA5 305 aa13.59□□□□□ -0.23
SYNE3-203ENST00000554873 ADIRFQ15847 76 aa13.59□□□□□ -0.23
SYNE3-203ENST00000554873 SP6Q3SY56 376 aa13.59□□□□□ -0.23
SYNE3-203ENST00000554873 HLA-DQA1Q5Y7H0 255 aa13.59□□□□□ -0.23
SYNE3-203ENST00000554873 CENPVQ7Z7K6 275 aaPredicted RBP13.59□□□□□ -0.23
SYNE3-203ENST00000554873 LRTM2Q8N967 370 aa13.59□□□□□ -0.23
SYNE3-203ENST00000554873 REEP6Q96HR9 211 aa13.59□□□□□ -0.23
SYNE3-203ENST00000554873 CIB3Q96Q77 187 aaPredicted RBP13.59□□□□□ -0.23
SYNE3-203ENST00000554873 VAMP8Q9BV40 100 aa13.59□□□□□ -0.23
SYNE3-203ENST00000554873 ELL3Q9HB65 397 aaPredicted RBP13.59□□□□□ -0.23
SYNE3-203ENST00000554873 TMEM106BQ9NUM4 274 aa13.59□□□□□ -0.23
SYNE3-203ENST00000554873 NAT8Q9UHE5 227 aa13.59□□□□□ -0.23
SYNE3-203ENST00000554873 PAM16Q9Y3D7 125 aa13.59□□□□□ -0.23
SYNE3-203ENST00000554873 ZFP92A6NM28 416 aa13.58□□□□□ -0.24
SYNE3-203ENST00000554873 MS4A18H0YCH9 400 aa13.58□□□□□ -0.24
SYNE3-203ENST00000554873 AQP7O14520 342 aa13.58□□□□□ -0.24
SYNE3-203ENST00000554873 HRASP01112 189 aa13.58□□□□□ -0.24
SYNE3-203ENST00000554873 DRD1P21728 446 aa13.58□□□□□ -0.24
SYNE3-203ENST00000554873 ZNF92Q03936 586 aa13.58□□□□□ -0.24
SYNE3-203ENST00000554873 MS4A18Q3C1V0 323 aa13.58□□□□□ -0.24
SYNE3-203ENST00000554873 TPTE2P1Q5T6R2 138 aa13.58□□□□□ -0.24
SYNE3-203ENST00000554873 H1FOOQ8IZA3 346 aaPredicted RBP13.58□□□□□ -0.24
SYNE3-203ENST00000554873 TMEM171Q8WVE6 324 aa13.58□□□□□ -0.24
SYNE3-203ENST00000554873 C18orf12Q96KH6 178 aa13.58□□□□□ -0.24
SYNE3-203ENST00000554873 IGSF23A1L1A6 192 aa13.58□□□□□ -0.24
SYNE3-203ENST00000554873 CBY3A6NI87 242 aa13.58□□□□□ -0.24
SYNE3-203ENST00000554873 TYMSP04818 313 aa13.58□□□□□ -0.24
SYNE3-203ENST00000554873 MTCP1P56278 107 aa13.58□□□□□ -0.24
SYNE3-203ENST00000554873 PIGPP57054 158 aa13.58□□□□□ -0.24
SYNE3-203ENST00000554873 DCAF7P61962 342 aa13.58□□□□□ -0.24
SYNE3-203ENST00000554873 C9orf50Q5SZB4 431 aa13.58□□□□□ -0.24
SYNE3-203ENST00000554873 KIAA0895LQ68EN5 471 aa13.58□□□□□ -0.24
SYNE3-203ENST00000554873 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.58□□□□□ -0.24
SYNE3-203ENST00000554873 C7orf61Q8IZ16 206 aa13.58□□□□□ -0.24
SYNE3-203ENST00000554873 LGI3Q8N145 548 aa13.58□□□□□ -0.24
SYNE3-203ENST00000554873 C1orf147Q96MC9 270 aaPredicted RBP13.58□□□□□ -0.24
SYNE3-203ENST00000554873 NAA60Q9H7X0 242 aa13.58□□□□□ -0.24
SYNE3-203ENST00000554873 GPR27Q9NS67 375 aa13.58□□□□□ -0.24
SYNE3-203ENST00000554873 DECR2Q9NUI1 292 aa13.58□□□□□ -0.24
SYNE3-203ENST00000554873 ZNF878C9JN71 531 aa13.57□□□□□ -0.24
SYNE3-203ENST00000554873 TOMM40O96008 361 aa13.57□□□□□ -0.24
SYNE3-203ENST00000554873 OR5G3P0C626 314 aa13.57□□□□□ -0.24
SYNE3-203ENST00000554873 JMJD7P0C870 316 aa13.57□□□□□ -0.24
SYNE3-203ENST00000554873 UBE2NP61088 152 aaKnown RBP13.57□□□□□ -0.24
SYNE3-203ENST00000554873 HYAL1Q12794 435 aa13.57□□□□□ -0.24
SYNE3-203ENST00000554873 ARL6IP1Q15041 203 aa13.57□□□□□ -0.24
SYNE3-203ENST00000554873 PRSS8Q16651 343 aa13.57□□□□□ -0.24
SYNE3-203ENST00000554873 IL22RA2Q969J5 263 aa13.57□□□□□ -0.24
SYNE3-203ENST00000554873 SEPSECSQ9HD40 501 aaKnown RBP13.57□□□□□ -0.24
SYNE3-203ENST00000554873 PRSS50Q9UI38 385 aa13.57□□□□□ -0.24
SYNE3-203ENST00000554873 LOC105371242A0A075B767 164 aa13.57□□□□□ -0.24
SYNE3-203ENST00000554873 RNF144BQ7Z419 303 aa13.57□□□□□ -0.24
SYNE3-203ENST00000554873 DAZLQ92904 295 aaKnown RBP13.57□□□□□ -0.24
SYNE3-203ENST00000554873 FOXQ1Q9C009 403 aa13.57□□□□□ -0.24
SYNE3-203ENST00000554873 WWTR1Q9GZV5 400 aa13.57□□□□□ -0.24
SYNE3-203ENST00000554873 C11orf1Q9H5F2 150 aa13.57□□□□□ -0.24
SYNE3-203ENST00000554873 PLEKHF2Q9H8W4 249 aa13.57□□□□□ -0.24
SYNE3-203ENST00000554873 BLKP51451 505 aa13.56□□□□□ -0.24
SYNE3-203ENST00000554873 MMDQ15546 238 aa13.56□□□□□ -0.24
SYNE3-203ENST00000554873 LIAT1Q6ZQX7 453 aa13.56□□□□□ -0.24
SYNE3-203ENST00000554873 TMEM256Q8N2U0 113 aa13.56□□□□□ -0.24
SYNE3-203ENST00000554873 STPG4Q8N801 248 aa13.56□□□□□ -0.24
SYNE3-203ENST00000554873 OR2D3Q8NGH3 330 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms