RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 LAIR2Q6ISS4 152 aa1.61□□□□□ -2.15
SCFD1-213ENST00000554776 FAM19A3Q7Z5A8 133 aa1.61□□□□□ -2.15
SCFD1-213ENST00000554776 C17orf78Q8N4C9 275 aa1.61□□□□□ -2.15
SCFD1-213ENST00000554776 LINC00304Q8N9R0 145 aa1.61□□□□□ -2.15
SCFD1-213ENST00000554776 PDCD6IPQ8WUM4 868 aaKnown RBP1.61□□□□□ -2.15
SCFD1-213ENST00000554776 FAAP24Q9BTP7 215 aa1.61□□□□□ -2.15
SCFD1-213ENST00000554776 SLC19A3Q9BZV2 496 aa1.61□□□□□ -2.15
SCFD1-213ENST00000554776 GABARAPL1Q9H0R8 117 aa1.61□□□□□ -2.15
SCFD1-213ENST00000554776 TRIM45Q9H8W5 580 aaPredicted RBP1.61□□□□□ -2.15
SCFD1-213ENST00000554776 FBXL3Q9UKT7 428 aa1.61□□□□□ -2.15
SCFD1-213ENST00000554776 NUP205Q92621 2012 aa1.61□□□□□ -2.15
SCFD1-213ENST00000554776 NOS1P29475 1434 aa1.6□□□□□ -2.15
SCFD1-213ENST00000554776 CACNA1DQ01668 2161 aa1.6□□□□□ -2.15
SCFD1-213ENST00000554776 IGHV2-26A0A0B4J1V2 119 aa1.6□□□□□ -2.15
SCFD1-213ENST00000554776 TRAV8-2A0A0B4J237 113 aa1.6□□□□□ -2.15
SCFD1-213ENST00000554776 A0A1W2PNN7 141 aa1.6□□□□□ -2.15
SCFD1-213ENST00000554776 A6NED7 52 aa1.6□□□□□ -2.15
SCFD1-213ENST00000554776 ZNF729A6NN14 1252 aaPredicted RBP1.6□□□□□ -2.15
SCFD1-213ENST00000554776 C8orf87E5RJ46 101 aa1.6□□□□□ -2.15
SCFD1-213ENST00000554776 F5H5P2 479 aa1.6□□□□□ -2.15
SCFD1-213ENST00000554776 H3BQ85 93 aa1.6□□□□□ -2.15
SCFD1-213ENST00000554776 I3L4J1 428 aa1.6□□□□□ -2.15
SCFD1-213ENST00000554776 J3QLI3 93 aa1.6□□□□□ -2.15
SCFD1-213ENST00000554776 K7ERS5 55 aa1.6□□□□□ -2.15
SCFD1-213ENST00000554776 MPZL2O60487 215 aa1.6□□□□□ -2.15
SCFD1-213ENST00000554776 IGHMP01871 453 aa1.6□□□□□ -2.15
SCFD1-213ENST00000554776 LIMS3P0CW19 117 aa1.6□□□□□ -2.15
SCFD1-213ENST00000554776 LIMS4P0CW20 117 aa1.6□□□□□ -2.15
SCFD1-213ENST00000554776 CGB3P0DN86 165 aa1.6□□□□□ -2.15
SCFD1-213ENST00000554776 CGB7P0DN87 165 aa1.6□□□□□ -2.15
SCFD1-213ENST00000554776 GTF2F2P13984 249 aa1.6□□□□□ -2.15
SCFD1-213ENST00000554776 PSMB9P28065 219 aa1.6□□□□□ -2.15
SCFD1-213ENST00000554776 CD34P28906 385 aa1.6□□□□□ -2.15
SCFD1-213ENST00000554776 KDELR2P33947 212 aa1.6□□□□□ -2.15
SCFD1-213ENST00000554776 CD151P48509 253 aa1.6□□□□□ -2.15
SCFD1-213ENST00000554776 RHOAP61586 193 aa1.6□□□□□ -2.15
SCFD1-213ENST00000554776 SLAMF1Q13291 335 aa1.6□□□□□ -2.15
SCFD1-213ENST00000554776 SYCP1Q15431 976 aa1.6□□□□□ -2.15
SCFD1-213ENST00000554776 LAMTOR1Q6IAA8 161 aa1.6□□□□□ -2.15
SCFD1-213ENST00000554776 CYHR1Q6ZMK1 362 aa1.6□□□□□ -2.15
SCFD1-213ENST00000554776 MRPL52Q86TS9 123 aaKnown RBP1.6□□□□□ -2.15
SCFD1-213ENST00000554776 ZIC4Q8N9L1 334 aa1.6□□□□□ -2.15
SCFD1-213ENST00000554776 ANGPTL6Q8NI99 470 aa1.6□□□□□ -2.15
SCFD1-213ENST00000554776 FAM45AQ8TCE6 357 aa1.6□□□□□ -2.15
SCFD1-213ENST00000554776 ZBED3Q96IU2 234 aaPredicted RBP1.6□□□□□ -2.15
SCFD1-213ENST00000554776 TMEM56Q96MV1 263 aa1.6□□□□□ -2.15
SCFD1-213ENST00000554776 UPF3BQ9BZI7 483 aaKnown RBP1.6□□□□□ -2.15
SCFD1-213ENST00000554776 TBL2Q9Y4P3 447 aaKnown RBP1.6□□□□□ -2.15
SCFD1-213ENST00000554776 R4GN34 69 aa1.6□□□□□ -2.15
SCFD1-213ENST00000554776 IGHV3-43A0A0B4J1X8 118 aa1.59□□□□□ -2.15
SCFD1-213ENST00000554776 EFCAB9A8MZ26 197 aa1.59□□□□□ -2.15
SCFD1-213ENST00000554776 MKRN2OSH3BPM6 223 aa1.59□□□□□ -2.15
SCFD1-213ENST00000554776 GPR171O14626 319 aa1.59□□□□□ -2.15
SCFD1-213ENST00000554776 TOR1AO14656 332 aa1.59□□□□□ -2.15
SCFD1-213ENST00000554776 CRXO43186 299 aaPredicted RBP1.59□□□□□ -2.15
SCFD1-213ENST00000554776 PSIP1O75475 530 aaKnown RBP1.59□□□□□ -2.15
SCFD1-213ENST00000554776 CDK14O94921 469 aa1.59□□□□□ -2.15
SCFD1-213ENST00000554776 INAFM2P0DMQ5 153 aa1.59□□□□□ -2.15
SCFD1-213ENST00000554776 MLNP12872 115 aa1.59□□□□□ -2.15
SCFD1-213ENST00000554776 HRES1P13985 223 aa1.59□□□□□ -2.15
SCFD1-213ENST00000554776 PYCR1P32322 319 aa1.59□□□□□ -2.15
SCFD1-213ENST00000554776 CBX5P45973 191 aa1.59□□□□□ -2.15
SCFD1-213ENST00000554776 FLI1Q01543 452 aaPredicted RBP1.59□□□□□ -2.15
SCFD1-213ENST00000554776 ZNHIT3Q15649 155 aaPredicted RBP1.59□□□□□ -2.15
SCFD1-213ENST00000554776 GOLGA7BQ2TAP0 167 aa1.59□□□□□ -2.15
SCFD1-213ENST00000554776 DEFB134Q4QY38 66 aa1.59□□□□□ -2.15
SCFD1-213ENST00000554776 MRPL2Q5T653 305 aaKnown RBP1.59□□□□□ -2.15
SCFD1-213ENST00000554776 XKRXQ6PP77 449 aa1.59□□□□□ -2.15
SCFD1-213ENST00000554776 OLIG3Q7RTU3 272 aa1.59□□□□□ -2.15
SCFD1-213ENST00000554776 PAGE2Q7Z2X7 111 aa1.59□□□□□ -2.15
SCFD1-213ENST00000554776 CRLF3Q8IUI8 442 aa1.59□□□□□ -2.15
SCFD1-213ENST00000554776 ZNF738Q8NE65 137 aa1.59□□□□□ -2.15
SCFD1-213ENST00000554776 OR4A5Q8NH83 315 aa1.59□□□□□ -2.15
SCFD1-213ENST00000554776 CASTOR1Q8WTX7 329 aa1.59□□□□□ -2.15
SCFD1-213ENST00000554776 PHF10Q8WUB8 498 aaKnown RBP1.59□□□□□ -2.15
SCFD1-213ENST00000554776 CCDC12Q8WUD4 166 aaPredicted RBP1.59□□□□□ -2.15
SCFD1-213ENST00000554776 DDIT4LQ96D03 193 aa1.59□□□□□ -2.15
SCFD1-213ENST00000554776 REEP6Q96HR9 211 aa1.59□□□□□ -2.15
SCFD1-213ENST00000554776 FAM210AQ96ND0 272 aa1.59□□□□□ -2.15
SCFD1-213ENST00000554776 POTEKPQ9BYX7 375 aa1.59□□□□□ -2.15
SCFD1-213ENST00000554776 TSGA10Q9BZW7 698 aa1.59□□□□□ -2.15
SCFD1-213ENST00000554776 OR52A5Q9H2C5 316 aa1.59□□□□□ -2.15
SCFD1-213ENST00000554776 ASCL3Q9NQ33 180 aa1.59□□□□□ -2.15
SCFD1-213ENST00000554776 CD300AQ9UGN4 299 aa1.59□□□□□ -2.15
SCFD1-213ENST00000554776 FADS3Q9Y5Q0 445 aa1.59□□□□□ -2.15
SCFD1-213ENST00000554776 GMEB1Q9Y692 573 aa1.59□□□□□ -2.15
SCFD1-213ENST00000554776 LRPPRCP42704 1394 aaKnown RBP1.59□□□□□ -2.16
SCFD1-213ENST00000554776 PIK3R4Q99570 1358 aa1.59□□□□□ -2.16
SCFD1-213ENST00000554776 MYO15BQ96JP2 1530 aa1.58□□□□□ -2.16
SCFD1-213ENST00000554776 IGHV1-45A0A0A0MS14 117 aa1.58□□□□□ -2.16
SCFD1-213ENST00000554776 IGHV3-21A0A0B4J1V1 117 aa1.58□□□□□ -2.16
SCFD1-213ENST00000554776 A0A1B0GTI1 187 aa1.58□□□□□ -2.16
SCFD1-213ENST00000554776 GMNCA6NCL1 334 aa1.58□□□□□ -2.16
SCFD1-213ENST00000554776 FGF16O43320 207 aa1.58□□□□□ -2.16
SCFD1-213ENST00000554776 ADAP1O75689 374 aa1.58□□□□□ -2.16
SCFD1-213ENST00000554776 EPPINO95925 133 aa1.58□□□□□ -2.16
SCFD1-213ENST00000554776 ASS1P00966 412 aaKnown RBP1.58□□□□□ -2.16
SCFD1-213ENST00000554776 PTHLHP12272 177 aa1.58□□□□□ -2.16
SCFD1-213ENST00000554776 CNTFRP26992 372 aa1.58□□□□□ -2.16
SCFD1-213ENST00000554776 EVI2BP34910 448 aa1.58□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms