RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 H3BSH0 61 aa3.37□□□□□ -1.87
VTI1B-203ENST00000554636 M0R1W7 72 aa3.37□□□□□ -1.87
VTI1B-203ENST00000554636 DLGAP1O14490 977 aa3.37□□□□□ -1.87
VTI1B-203ENST00000554636 SYT7O43581 403 aa3.37□□□□□ -1.87
VTI1B-203ENST00000554636 NDUFB3O43676 98 aa3.37□□□□□ -1.87
VTI1B-203ENST00000554636 RPP14O95059 124 aaKnown RBP3.37□□□□□ -1.87
VTI1B-203ENST00000554636 UBCP0CG48 685 aaKnown RBP3.37□□□□□ -1.87
VTI1B-203ENST00000554636 HAAOP46952 286 aa3.37□□□□□ -1.87
VTI1B-203ENST00000554636 GABRA2P47869 451 aa3.37□□□□□ -1.87
VTI1B-203ENST00000554636 CEBPDP49716 269 aaPredicted RBP3.37□□□□□ -1.87
VTI1B-203ENST00000554636 CAV3P56539 151 aa3.37□□□□□ -1.87
VTI1B-203ENST00000554636 BPIFB3P59826 476 aa3.37□□□□□ -1.87
VTI1B-203ENST00000554636 CDC42P60953 191 aa3.37□□□□□ -1.87
VTI1B-203ENST00000554636 ERVK11-1P61568 191 aa3.37□□□□□ -1.87
VTI1B-203ENST00000554636 ACTC1P68032 377 aa3.37□□□□□ -1.87
VTI1B-203ENST00000554636 ACTA1P68133 377 aa3.37□□□□□ -1.87
VTI1B-203ENST00000554636 IL13RA2Q14627 380 aa3.37□□□□□ -1.87
VTI1B-203ENST00000554636 UBE2V2Q15819 145 aa3.37□□□□□ -1.87
VTI1B-203ENST00000554636 ODF4Q2M2E3 257 aa3.37□□□□□ -1.87
VTI1B-203ENST00000554636 SMIM21Q3B7S5 101 aa3.37□□□□□ -1.87
VTI1B-203ENST00000554636 SLC25A30Q5SVS4 291 aa3.37□□□□□ -1.87
VTI1B-203ENST00000554636 C16orf87Q6PH81 154 aa3.37□□□□□ -1.87
VTI1B-203ENST00000554636 METAP1DQ6UB28 335 aaPredicted RBP3.37□□□□□ -1.87
VTI1B-203ENST00000554636 CCDC121Q6ZUS5 278 aa3.37□□□□□ -1.87
VTI1B-203ENST00000554636 TCF23Q7RTU1 214 aa3.37□□□□□ -1.87
VTI1B-203ENST00000554636 FAM220AQ7Z4H9 259 aa3.37□□□□□ -1.87
VTI1B-203ENST00000554636 ZNF573Q86YE8 665 aa3.37□□□□□ -1.87
VTI1B-203ENST00000554636 CALHM1Q8IU99 346 aa3.37□□□□□ -1.87
VTI1B-203ENST00000554636 PDZD9Q8IXQ8 264 aa3.37□□□□□ -1.87
VTI1B-203ENST00000554636 BATF2Q8N1L9 274 aa3.37□□□□□ -1.87
VTI1B-203ENST00000554636 PNKDQ8N490 385 aa3.37□□□□□ -1.87
VTI1B-203ENST00000554636 TMEM86BQ8N661 226 aa3.37□□□□□ -1.87
VTI1B-203ENST00000554636 YIPF7Q8N8F6 280 aa3.37□□□□□ -1.87
VTI1B-203ENST00000554636 CCDC54Q8NEL0 328 aa3.37□□□□□ -1.87
VTI1B-203ENST00000554636 TMEM185AQ8NFB2 350 aa3.37□□□□□ -1.87
VTI1B-203ENST00000554636 OR2G2Q8NGZ5 317 aa3.37□□□□□ -1.87
VTI1B-203ENST00000554636 ZNF671Q8TAW3 534 aa3.37□□□□□ -1.87
VTI1B-203ENST00000554636 TRMT10AQ8TBZ6 339 aaKnown RBP3.37□□□□□ -1.87
VTI1B-203ENST00000554636 APH1BQ8WW43 257 aa3.37□□□□□ -1.87
VTI1B-203ENST00000554636 TRUB1Q8WWH5 349 aaKnown RBP3.37□□□□□ -1.87
VTI1B-203ENST00000554636 TMEM18Q96B42 140 aa3.37□□□□□ -1.87
VTI1B-203ENST00000554636 TMIGD2Q96BF3 282 aa3.37□□□□□ -1.87
VTI1B-203ENST00000554636 C10orf35Q96D05 121 aa3.37□□□□□ -1.87
VTI1B-203ENST00000554636 LGALS12Q96DT0 336 aa3.37□□□□□ -1.87
VTI1B-203ENST00000554636 ADAT3Q96EY9 351 aaPredicted RBP3.37□□□□□ -1.87
VTI1B-203ENST00000554636 SLC29A1Q99808 456 aa3.37□□□□□ -1.87
VTI1B-203ENST00000554636 NRIP2Q9BQI9 281 aa3.37□□□□□ -1.87
VTI1B-203ENST00000554636 ZNF649Q9BS31 505 aa3.37□□□□□ -1.87
VTI1B-203ENST00000554636 CHIAQ9BZP6 476 aa3.37□□□□□ -1.87
VTI1B-203ENST00000554636 PKIBQ9C010 78 aa3.37□□□□□ -1.87
VTI1B-203ENST00000554636 NPFFR1Q9GZQ6 430 aa3.37□□□□□ -1.87
VTI1B-203ENST00000554636 CHST5Q9GZS9 411 aa3.37□□□□□ -1.87
VTI1B-203ENST00000554636 CTDSP1Q9GZU7 261 aa3.37□□□□□ -1.87
VTI1B-203ENST00000554636 NOX4Q9NPH5 578 aa3.37□□□□□ -1.87
VTI1B-203ENST00000554636 IMPAD1Q9NX62 359 aa3.37□□□□□ -1.87
VTI1B-203ENST00000554636 RASL12Q9NYN1 266 aa3.37□□□□□ -1.87
VTI1B-203ENST00000554636 ONECUT1Q9UBC0 465 aa3.37□□□□□ -1.87
VTI1B-203ENST00000554636 AASSQ9UDR5 926 aa3.37□□□□□ -1.87
VTI1B-203ENST00000554636 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.37□□□□□ -1.87
VTI1B-203ENST00000554636 EXOGQ9Y2C4 368 aaKnown RBP3.37□□□□□ -1.87
VTI1B-203ENST00000554636 NBEAL1Q6ZS30 2694 aa3.37□□□□□ -1.87
VTI1B-203ENST00000554636 IGKV1-9A0A0C4DH69 117 aa3.36□□□□□ -1.87
VTI1B-203ENST00000554636 OR4C45A6NMZ5 311 aa3.36□□□□□ -1.87
VTI1B-203ENST00000554636 F8VVB4 439 aa3.36□□□□□ -1.87
VTI1B-203ENST00000554636 F8VWA3 439 aa3.36□□□□□ -1.87
VTI1B-203ENST00000554636 NPFFO15130 113 aa3.36□□□□□ -1.87
VTI1B-203ENST00000554636 SLC25A17O43808 307 aa3.36□□□□□ -1.87
VTI1B-203ENST00000554636 ZNF737O75373 536 aa3.36□□□□□ -1.87
VTI1B-203ENST00000554636 GATBO75879 557 aaKnown RBP3.36□□□□□ -1.87
VTI1B-203ENST00000554636 NXPH2O95156 264 aa3.36□□□□□ -1.87
VTI1B-203ENST00000554636 NDUFA7O95182 113 aa3.36□□□□□ -1.87
VTI1B-203ENST00000554636 IGHV4-59P01825 116 aa3.36□□□□□ -1.87
VTI1B-203ENST00000554636 DBTP11182 482 aaKnown RBP3.36□□□□□ -1.87
VTI1B-203ENST00000554636 ATF1P18846 271 aa3.36□□□□□ -1.87
VTI1B-203ENST00000554636 MDKP21741 143 aaPredicted RBP3.36□□□□□ -1.87
VTI1B-203ENST00000554636 OMGP23515 440 aa3.36□□□□□ -1.87
VTI1B-203ENST00000554636 C21orf33P30042 268 aaPredicted RBP3.36□□□□□ -1.87
VTI1B-203ENST00000554636 PRDX2P32119 198 aa3.36□□□□□ -1.87
VTI1B-203ENST00000554636 AMTP48728 403 aa3.36□□□□□ -1.87
VTI1B-203ENST00000554636 RAG2P55895 527 aa3.36□□□□□ -1.87
VTI1B-203ENST00000554636 DLX6P56179 175 aa3.36□□□□□ -1.87
VTI1B-203ENST00000554636 OR12D2P58182 307 aa3.36□□□□□ -1.87
VTI1B-203ENST00000554636 KRTAP10-6P60371 365 aaPredicted RBP3.36□□□□□ -1.87
VTI1B-203ENST00000554636 IL24Q13007 206 aa3.36□□□□□ -1.87
VTI1B-203ENST00000554636 ZNF273Q14593 569 aa3.36□□□□□ -1.87
VTI1B-203ENST00000554636 TAF9Q16594 264 aa3.36□□□□□ -1.87
VTI1B-203ENST00000554636 MEDAGQ5VYS4 303 aa3.36□□□□□ -1.87
VTI1B-203ENST00000554636 NCR3LG1Q68D85 454 aa3.36□□□□□ -1.87
VTI1B-203ENST00000554636 FIP1L1Q6UN15 594 aaKnown RBP3.36□□□□□ -1.87
VTI1B-203ENST00000554636 UTS2BQ765I0 119 aa3.36□□□□□ -1.87
VTI1B-203ENST00000554636 C16orf82Q7Z2V1 217 aa3.36□□□□□ -1.87
VTI1B-203ENST00000554636 ANGPTL5Q86XS5 388 aa3.36□□□□□ -1.87
VTI1B-203ENST00000554636 ENTHD1Q8IYW4 607 aa3.36□□□□□ -1.87
VTI1B-203ENST00000554636 RDH10Q8IZV5 341 aa3.36□□□□□ -1.87
VTI1B-203ENST00000554636 ZNF561Q8N587 486 aa3.36□□□□□ -1.87
VTI1B-203ENST00000554636 C11orf42Q8N5U0 333 aa3.36□□□□□ -1.87
VTI1B-203ENST00000554636 C3orf56Q8N813 242 aa3.36□□□□□ -1.87
VTI1B-203ENST00000554636 NEXN-AS1Q8NBZ9 246 aa3.36□□□□□ -1.87
VTI1B-203ENST00000554636 ZNRF1Q8ND25 227 aa3.36□□□□□ -1.87
VTI1B-203ENST00000554636 OR51A4Q8NGJ6 313 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms