RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 CHST4Q8NCG5 386 aa10.39□□□□□ -0.75
SHMT2-214ENST00000554604 OR56B1Q8NGI3 324 aa10.39□□□□□ -0.75
SHMT2-214ENST00000554604 NANPQ8TBE9 248 aa10.39□□□□□ -0.75
SHMT2-214ENST00000554604 ZNF418Q8TF45 676 aaPredicted RBP10.39□□□□□ -0.75
SHMT2-214ENST00000554604 TECTBQ96PL2 329 aa10.39□□□□□ -0.75
SHMT2-214ENST00000554604 ADAT1Q9BUB4 502 aaKnown RBP10.39□□□□□ -0.75
SHMT2-214ENST00000554604 TMPRSS13Q9BYE2 586 aa10.39□□□□□ -0.75
SHMT2-214ENST00000554604 OPA3Q9H6K4 179 aa10.39□□□□□ -0.75
SHMT2-214ENST00000554604 GPN1Q9HCN4 374 aaPredicted RBP10.39□□□□□ -0.75
SHMT2-214ENST00000554604 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.39□□□□□ -0.75
SHMT2-214ENST00000554604 UFSP2Q9NUQ7 469 aa10.39□□□□□ -0.75
SHMT2-214ENST00000554604 PAIP2BQ9ULR5 123 aaKnown RBP10.39□□□□□ -0.75
SHMT2-214ENST00000554604 PPIAL4EA0A075B759 164 aa10.38□□□□□ -0.75
SHMT2-214ENST00000554604 A0A0A6YYD4 124 aa10.38□□□□□ -0.75
SHMT2-214ENST00000554604 PPIAL4CA0A0B4J2A2 164 aa10.38□□□□□ -0.75
SHMT2-214ENST00000554604 A0A1B0GWJ7 208 aa10.38□□□□□ -0.75
SHMT2-214ENST00000554604 CEACAM18A8MTB9 384 aa10.38□□□□□ -0.75
SHMT2-214ENST00000554604 PPIAL4DF5H284 164 aa10.38□□□□□ -0.75
SHMT2-214ENST00000554604 CD3DP04234 171 aa10.38□□□□□ -0.75
SHMT2-214ENST00000554604 PPIAL4FP0DN26 164 aa10.38□□□□□ -0.75
SHMT2-214ENST00000554604 RPS2P15880 293 aaKnown RBP10.38□□□□□ -0.75
SHMT2-214ENST00000554604 TBPP20226 339 aa10.38□□□□□ -0.75
SHMT2-214ENST00000554604 MPZP25189 248 aa10.38□□□□□ -0.75
SHMT2-214ENST00000554604 ZFP36P26651 326 aaKnown RBP10.38□□□□□ -0.75
SHMT2-214ENST00000554604 CD200P41217 278 aa10.38□□□□□ -0.75
SHMT2-214ENST00000554604 GATA4P43694 442 aa10.38□□□□□ -0.75
SHMT2-214ENST00000554604 FAM3AP98173 230 aa10.38□□□□□ -0.75
SHMT2-214ENST00000554604 ARL6IP1Q15041 203 aa10.38□□□□□ -0.75
SHMT2-214ENST00000554604 C1orf229Q6ZS94 237 aaPredicted RBP10.38□□□□□ -0.75
SHMT2-214ENST00000554604 LHFPL2Q6ZUX7 228 aa10.38□□□□□ -0.75
SHMT2-214ENST00000554604 C1QL2Q7Z5L3 287 aa10.38□□□□□ -0.75
SHMT2-214ENST00000554604 TRAPPC6BQ86SZ2 158 aa10.38□□□□□ -0.75
SHMT2-214ENST00000554604 TMEM104Q8NE00 496 aa10.38□□□□□ -0.75
SHMT2-214ENST00000554604 OR11H7Q8NGC8 314 aa10.38□□□□□ -0.75
SHMT2-214ENST00000554604 TNFAIP8L1Q8WVP5 186 aa10.38□□□□□ -0.75
SHMT2-214ENST00000554604 ERGIC1Q969X5 290 aa10.38□□□□□ -0.75
SHMT2-214ENST00000554604 SLC25A21Q9BQT8 299 aaPredicted RBP10.38□□□□□ -0.75
SHMT2-214ENST00000554604 GINS4Q9BRT9 223 aa10.38□□□□□ -0.75
SHMT2-214ENST00000554604 TM2D1Q9BX74 207 aa10.38□□□□□ -0.75
SHMT2-214ENST00000554604 MIOXQ9UGB7 285 aa10.38□□□□□ -0.75
SHMT2-214ENST00000554604 ANAPC10Q9UM13 185 aa10.38□□□□□ -0.75
SHMT2-214ENST00000554604 FLVCR2Q9UPI3 526 aa10.38□□□□□ -0.75
SHMT2-214ENST00000554604 MEIKINA0A087WXM9 373 aa10.37□□□□□ -0.75
SHMT2-214ENST00000554604 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.37□□□□□ -0.75
SHMT2-214ENST00000554604 FOXI3A8MTJ6 420 aaPredicted RBP10.37□□□□□ -0.75
SHMT2-214ENST00000554604 ZNF736B4DX44 427 aaPredicted RBP10.37□□□□□ -0.75
SHMT2-214ENST00000554604 CA11O75493 328 aa10.37□□□□□ -0.75
SHMT2-214ENST00000554604 CRTAPO75718 401 aaPredicted RBP10.37□□□□□ -0.75
SHMT2-214ENST00000554604 ZNF735P0CB33 412 aa10.37□□□□□ -0.75
SHMT2-214ENST00000554604 ANXA3P12429 323 aa10.37□□□□□ -0.75
SHMT2-214ENST00000554604 HIST1H1DP16402 221 aaKnown RBP10.37□□□□□ -0.75
SHMT2-214ENST00000554604 ZP1P60852 638 aa10.37□□□□□ -0.75
SHMT2-214ENST00000554604 SEC61A1P61619 476 aaKnown RBP10.37□□□□□ -0.75
SHMT2-214ENST00000554604 MRPS15P82914 257 aaKnown RBP10.37□□□□□ -0.75
SHMT2-214ENST00000554604 MZT1Q08AG7 82 aa10.37□□□□□ -0.75
SHMT2-214ENST00000554604 PRAMEF6Q5VXH4 476 aa10.37□□□□□ -0.75
SHMT2-214ENST00000554604 ZNF626Q68DY1 528 aa10.37□□□□□ -0.75
SHMT2-214ENST00000554604 ASCL4Q6XD76 172 aa10.37□□□□□ -0.75
SHMT2-214ENST00000554604 NLRC3Q7RTR2 1065 aa10.37□□□□□ -0.75
SHMT2-214ENST00000554604 SLC36A1Q7Z2H8 476 aa10.37□□□□□ -0.75
SHMT2-214ENST00000554604 OR56B2PQ8NGI1 322 aa10.37□□□□□ -0.75
SHMT2-214ENST00000554604 OR4D10Q8NGI6 311 aa10.37□□□□□ -0.75
SHMT2-214ENST00000554604 OR51S1Q8NGJ8 323 aa10.37□□□□□ -0.75
SHMT2-214ENST00000554604 DACT3Q96B18 629 aaPredicted RBP10.37□□□□□ -0.75
SHMT2-214ENST00000554604 RAB3CQ96E17 227 aa10.37□□□□□ -0.75
SHMT2-214ENST00000554604 S100A13Q99584 98 aa10.37□□□□□ -0.75
SHMT2-214ENST00000554604 NICN1Q9BSH3 213 aa10.37□□□□□ -0.75
SHMT2-214ENST00000554604 SSBP3Q9BWW4 388 aaPredicted RBP10.37□□□□□ -0.75
SHMT2-214ENST00000554604 SELENOIQ9C0D9 397 aa10.37□□□□□ -0.75
SHMT2-214ENST00000554604 ALX4Q9H161 411 aaPredicted RBP10.37□□□□□ -0.75
SHMT2-214ENST00000554604 FN3KRPQ9HA64 309 aa10.37□□□□□ -0.75
SHMT2-214ENST00000554604 TMEM165Q9HC07 324 aa10.37□□□□□ -0.75
SHMT2-214ENST00000554604 MMP26Q9NRE1 261 aa10.37□□□□□ -0.75
SHMT2-214ENST00000554604 GPR173Q9NS66 373 aa10.37□□□□□ -0.75
SHMT2-214ENST00000554604 SLC2A8Q9NY64 477 aa10.37□□□□□ -0.75
SHMT2-214ENST00000554604 ING4Q9UNL4 249 aa10.37□□□□□ -0.75
SHMT2-214ENST00000554604 PPIAL4AQ9Y536 164 aa10.37□□□□□ -0.75
SHMT2-214ENST00000554604 DNHD1Q96M86 4753 aa10.37□□□□□ -0.75
SHMT2-214ENST00000554604 ZNF816-ZNF321PA0A0X1KG74 233 aa10.36□□□□□ -0.75
SHMT2-214ENST00000554604 FAM172BPA6NC97 362 aa10.36□□□□□ -0.75
SHMT2-214ENST00000554604 ANKRD30BLA7E2S9 258 aa10.36□□□□□ -0.75
SHMT2-214ENST00000554604 DISC1C4P0D8 188 aa10.36□□□□□ -0.75
SHMT2-214ENST00000554604 F5H0A9 414 aaPredicted RBP10.36□□□□□ -0.75
SHMT2-214ENST00000554604 MFNGO00587 321 aa10.36□□□□□ -0.75
SHMT2-214ENST00000554604 SSNA1O43805 119 aa10.36□□□□□ -0.75
SHMT2-214ENST00000554604 SSX5O60225 188 aa10.36□□□□□ -0.75
SHMT2-214ENST00000554604 NRASP01111 189 aa10.36□□□□□ -0.75
SHMT2-214ENST00000554604 WNT2P09544 360 aa10.36□□□□□ -0.75
SHMT2-214ENST00000554604 MGMTP16455 207 aa10.36□□□□□ -0.75
SHMT2-214ENST00000554604 GNB3P16520 340 aa10.36□□□□□ -0.75
SHMT2-214ENST00000554604 NAT1P18440 290 aa10.36□□□□□ -0.75
SHMT2-214ENST00000554604 CPT2P23786 658 aa10.36□□□□□ -0.75
SHMT2-214ENST00000554604 PMELP40967 661 aa10.36□□□□□ -0.75
SHMT2-214ENST00000554604 CBX5P45973 191 aa10.36□□□□□ -0.75
SHMT2-214ENST00000554604 RBP2P50120 134 aa10.36□□□□□ -0.75
SHMT2-214ENST00000554604 MTCP1P56278 107 aa10.36□□□□□ -0.75
SHMT2-214ENST00000554604 TMEM50BP56557 158 aa10.36□□□□□ -0.75
SHMT2-214ENST00000554604 GNG2P59768 71 aa10.36□□□□□ -0.75
SHMT2-214ENST00000554604 GNB2P62879 340 aa10.36□□□□□ -0.75
SHMT2-214ENST00000554604 CDK10Q15131 360 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms