RNA–Protein interactions for RNA: ENST00000554514.1

ARHGEF40-203, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 2,928 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-203ENST00000554514 FAM213BQ8TBF2 198 aa13.46□□□□□ -0.25
ARHGEF40-203ENST00000554514 SPSB4Q96A44 273 aa13.46□□□□□ -0.25
ARHGEF40-203ENST00000554514 GUCD1Q96NT3 240 aa13.46□□□□□ -0.25
ARHGEF40-203ENST00000554514 TTTY12Q9BZ98 90 aa13.46□□□□□ -0.25
ARHGEF40-203ENST00000554514 B4GALT7Q9UBV7 327 aa13.46□□□□□ -0.25
ARHGEF40-203ENST00000554514 FBXO7Q9Y3I1 522 aa13.46□□□□□ -0.25
ARHGEF40-203ENST00000554514 PQLC2LA1A4F0 135 aa13.46□□□□□ -0.26
ARHGEF40-203ENST00000554514 ADAM20O43506 726 aa13.46□□□□□ -0.26
ARHGEF40-203ENST00000554514 SPP1P10451 314 aa13.46□□□□□ -0.26
ARHGEF40-203ENST00000554514 DAOP14920 347 aa13.46□□□□□ -0.26
ARHGEF40-203ENST00000554514 ACP1P24666 158 aa13.46□□□□□ -0.26
ARHGEF40-203ENST00000554514 TGIF1Q15583 401 aa13.46□□□□□ -0.26
ARHGEF40-203ENST00000554514 TAAR9Q96RI9 348 aa13.46□□□□□ -0.26
ARHGEF40-203ENST00000554514 USB1Q9BQ65 265 aaKnown RBP13.46□□□□□ -0.26
ARHGEF40-203ENST00000554514 REPIN1Q9BWE0 567 aaKnown RBP13.46□□□□□ -0.26
ARHGEF40-203ENST00000554514 M0R036 132 aa13.45□□□□□ -0.26
ARHGEF40-203ENST00000554514 P2RY1P47900 373 aa13.45□□□□□ -0.26
ARHGEF40-203ENST00000554514 CXorf66Q5JRM2 361 aaPredicted RBP13.45□□□□□ -0.26
ARHGEF40-203ENST00000554514 TMEM217Q8N7C4 229 aa13.45□□□□□ -0.26
ARHGEF40-203ENST00000554514 HIST1H2AAQ96QV6 131 aa13.45□□□□□ -0.26
ARHGEF40-203ENST00000554514 CCL28Q9NRJ3 127 aa13.45□□□□□ -0.26
ARHGEF40-203ENST00000554514 C19orf12Q9NSK7 152 aa13.45□□□□□ -0.26
ARHGEF40-203ENST00000554514 LUZP4Q9P127 313 aa13.45□□□□□ -0.26
ARHGEF40-203ENST00000554514 TRAV39A0A0B4J263 110 aa13.45□□□□□ -0.26
ARHGEF40-203ENST00000554514 KCNJ3P48549 501 aa13.45□□□□□ -0.26
ARHGEF40-203ENST00000554514 EWSR1Q01844 656 aaKnown RBP eCLIP13.45□□□□□ -0.26
ARHGEF40-203ENST00000554514 HERPUD1Q15011 391 aa13.45□□□□□ -0.26
ARHGEF40-203ENST00000554514 GUK1Q16774 197 aa13.45□□□□□ -0.26
ARHGEF40-203ENST00000554514 HIKESHIQ53FT3 197 aa13.45□□□□□ -0.26
ARHGEF40-203ENST00000554514 NUFIP2Q7Z417 695 aaKnown RBP13.45□□□□□ -0.26
ARHGEF40-203ENST00000554514 LRTM2Q8N967 370 aa13.45□□□□□ -0.26
ARHGEF40-203ENST00000554514 UBALD1Q8TB05 177 aa13.45□□□□□ -0.26
ARHGEF40-203ENST00000554514 TMEM45BQ96B21 275 aa13.45□□□□□ -0.26
ARHGEF40-203ENST00000554514 APH1AQ96BI3 265 aa13.45□□□□□ -0.26
ARHGEF40-203ENST00000554514 C14orf79Q96F83 325 aa13.45□□□□□ -0.26
ARHGEF40-203ENST00000554514 CLCC1Q96S66 551 aa13.45□□□□□ -0.26
ARHGEF40-203ENST00000554514 SPACA1Q9HBV2 294 aa13.45□□□□□ -0.26
ARHGEF40-203ENST00000554514 FAM86C1Q9NVL1 165 aa13.45□□□□□ -0.26
ARHGEF40-203ENST00000554514 DCAF16Q9NXF7 216 aa13.45□□□□□ -0.26
ARHGEF40-203ENST00000554514 TMED3Q9Y3Q3 217 aa13.45□□□□□ -0.26
ARHGEF40-203ENST00000554514 CST7O76096 145 aa13.44□□□□□ -0.26
ARHGEF40-203ENST00000554514 DANCRP0C864 163 aa13.44□□□□□ -0.26
ARHGEF40-203ENST00000554514 EPHA1P21709 976 aa13.44□□□□□ -0.26
ARHGEF40-203ENST00000554514 SNCAP37840 140 aa13.44□□□□□ -0.26
ARHGEF40-203ENST00000554514 NKX2-1P43699 371 aaPredicted RBP13.44□□□□□ -0.26
ARHGEF40-203ENST00000554514 IL13RA2Q14627 380 aa13.44□□□□□ -0.26
ARHGEF40-203ENST00000554514 MCEMP1Q8IX19 187 aa13.44□□□□□ -0.26
ARHGEF40-203ENST00000554514 PRR18Q8N4B5 295 aa13.44□□□□□ -0.26
ARHGEF40-203ENST00000554514 OR4D5Q8NGN0 318 aa13.44□□□□□ -0.26
ARHGEF40-203ENST00000554514 TECTBQ96PL2 329 aa13.44□□□□□ -0.26
ARHGEF40-203ENST00000554514 TMEM222Q9H0R3 208 aa13.44□□□□□ -0.26
ARHGEF40-203ENST00000554514 Q9N2K0 584 aa13.44□□□□□ -0.26
ARHGEF40-203ENST00000554514 POMT1Q9Y6A1 747 aa13.44□□□□□ -0.26
ARHGEF40-203ENST00000554514 TECTAO75443 2155 aa13.44□□□□□ -0.26
ARHGEF40-203ENST00000554514 TRDCB7Z8K6 153 aa13.44□□□□□ -0.26
ARHGEF40-203ENST00000554514 RAB13P51153 203 aa13.44□□□□□ -0.26
ARHGEF40-203ENST00000554514 UCP3P55916 312 aa13.44□□□□□ -0.26
ARHGEF40-203ENST00000554514 ZNF528Q3MIS6 628 aa13.44□□□□□ -0.26
ARHGEF40-203ENST00000554514 ZNF600Q6ZNG1 722 aa13.44□□□□□ -0.26
ARHGEF40-203ENST00000554514 COLCA1Q6ZS62 124 aa13.44□□□□□ -0.26
ARHGEF40-203ENST00000554514 MKXQ8IYA7 352 aa13.44□□□□□ -0.26
ARHGEF40-203ENST00000554514 TMEM251Q8N6I4 163 aa13.44□□□□□ -0.26
ARHGEF40-203ENST00000554514 IL1F10Q8WWZ1 152 aa13.44□□□□□ -0.26
ARHGEF40-203ENST00000554514 ISOC2Q96AB3 205 aa13.44□□□□□ -0.26
ARHGEF40-203ENST00000554514 ABHD14AQ9BUJ0 271 aa13.44□□□□□ -0.26
ARHGEF40-203ENST00000554514 PRSS50Q9UI38 385 aa13.44□□□□□ -0.26
ARHGEF40-203ENST00000554514 A0A1W2PNU3 283 aaPredicted RBP13.43□□□□□ -0.26
ARHGEF40-203ENST00000554514 IGSF23A1L1A6 192 aa13.43□□□□□ -0.26
ARHGEF40-203ENST00000554514 GPR37O15354 613 aa13.43□□□□□ -0.26
ARHGEF40-203ENST00000554514 H2AFB1P0C5Y9 115 aa13.43□□□□□ -0.26
ARHGEF40-203ENST00000554514 OR13C7P0DN81 318 aa13.43□□□□□ -0.26
ARHGEF40-203ENST00000554514 PPP1CCP36873 323 aaKnown RBP13.43□□□□□ -0.26
ARHGEF40-203ENST00000554514 MPLP40238 635 aa13.43□□□□□ -0.26
ARHGEF40-203ENST00000554514 CEBPGP53567 150 aa13.43□□□□□ -0.26
ARHGEF40-203ENST00000554514 FGF12P61328 243 aa13.43□□□□□ -0.26
ARHGEF40-203ENST00000554514 CEACAM21Q3KPI0 293 aa13.43□□□□□ -0.26
ARHGEF40-203ENST00000554514 AVPI1Q5T686 147 aa13.43□□□□□ -0.26
ARHGEF40-203ENST00000554514 GPR157Q5UAW9 335 aa13.43□□□□□ -0.26
ARHGEF40-203ENST00000554514 LINC00518Q8N0U6 118 aa13.43□□□□□ -0.26
ARHGEF40-203ENST00000554514 OR2C3Q8N628 320 aa13.43□□□□□ -0.26
ARHGEF40-203ENST00000554514 ZFP62Q8NB50 900 aaPredicted RBP13.43□□□□□ -0.26
ARHGEF40-203ENST00000554514 CD300LFQ8TDQ1 290 aa13.43□□□□□ -0.26
ARHGEF40-203ENST00000554514 CACFD1Q9UGQ2 172 aa13.43□□□□□ -0.26
ARHGEF40-203ENST00000554514 MEX3AA1L020 520 aaKnown RBP13.43□□□□□ -0.26
ARHGEF40-203ENST00000554514 SLC22A20A6NK97 555 aa13.43□□□□□ -0.26
ARHGEF40-203ENST00000554514 CDRT15L2A8MXV6 281 aa13.43□□□□□ -0.26
ARHGEF40-203ENST00000554514 FAM157AC9JC47 383 aa13.43□□□□□ -0.26
ARHGEF40-203ENST00000554514 C20orf204Q6ZNR8 217 aa13.43□□□□□ -0.26
ARHGEF40-203ENST00000554514 APOBEC3DQ96AK3 386 aaPredicted RBP13.43□□□□□ -0.26
ARHGEF40-203ENST00000554514 BOD1Q96IK1 185 aa13.43□□□□□ -0.26
ARHGEF40-203ENST00000554514 GINS3Q9BRX5 216 aa13.43□□□□□ -0.26
ARHGEF40-203ENST00000554514 A0A1W2PR80 420 aa13.43□□□□□ -0.26
ARHGEF40-203ENST00000554514 SEC11BP0C7V7 166 aa13.43□□□□□ -0.26
ARHGEF40-203ENST00000554514 VAMP2P63027 116 aa13.43□□□□□ -0.26
ARHGEF40-203ENST00000554514 OR2T2Q6IF00 324 aa13.43□□□□□ -0.26
ARHGEF40-203ENST00000554514 SELENOHQ8IZQ5 122 aaKnown RBP13.43□□□□□ -0.26
ARHGEF40-203ENST00000554514 OR51H1Q8NH63 302 aa13.43□□□□□ -0.26
ARHGEF40-203ENST00000554514 DEFB127Q9H1M4 99 aa13.43□□□□□ -0.26
ARHGEF40-203ENST00000554514 IL17BQ9UHF5 180 aa13.43□□□□□ -0.26
ARHGEF40-203ENST00000554514 MRPS18CQ9Y3D5 142 aaKnown RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms