RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 MELKQ14680 651 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 ZFP69Q49AA0 526 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 PABPC1L2AQ5JQF8 200 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 CLEC12AQ5QGZ9 265 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 FAM78BQ5VT40 261 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 TMEM200BQ69YZ2 307 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 LCNL1Q6ZST4 164 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 SLC36A1Q7Z2H8 476 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 HMGN2P46Q86SG4 172 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 MS4A15Q8N5U1 240 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 OR4K1Q8NGD4 311 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 SPATA3Q8NHX4 192 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 ZDHHC19Q8WVZ1 309 aaPredicted RBP2.31□□□□□ -2.04
PRPF39-206ENST00000554429 TCTEX1D2Q8WW35 142 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 PTX4Q96A99 478 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 RPUSD4Q96CM3 377 aaKnown RBP2.31□□□□□ -2.04
PRPF39-206ENST00000554429 GRAMD2BQ96HH9 432 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 FAM46AQ96IP4 442 aaKnown RBP2.31□□□□□ -2.04
PRPF39-206ENST00000554429 DPCDQ9BVM2 203 aaPredicted RBP2.31□□□□□ -2.04
PRPF39-206ENST00000554429 MROQ9BYG7 248 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 ACTR3CQ9C0K3 210 aaPredicted RBP2.31□□□□□ -2.04
PRPF39-206ENST00000554429 VN1R1Q9GZP7 353 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 RPF2Q9H7B2 306 aaKnown RBP2.31□□□□□ -2.04
PRPF39-206ENST00000554429 SH2D2AQ9NP31 389 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 PLSCR3Q9NRY6 295 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 TAS2R16Q9NYV7 291 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 OPTCQ9UBM4 332 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 DHDHQ9UQ10 334 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 WDR83OSQ9Y284 106 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 KLF13Q9Y2Y9 288 aaPredicted RBP2.31□□□□□ -2.04
PRPF39-206ENST00000554429 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP2.31□□□□□ -2.04
PRPF39-206ENST00000554429 SPTBP11277 2137 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 ALPK2Q86TB3 2170 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 TRGV8A0A0C4DH27 118 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 FAM95CA0A1B0GW59 222 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 DHRS12A0PJE2 317 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 CLDN24A6NM45 220 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 F8VVB4 439 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 F8VWA3 439 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 J3QR06 171 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 DNASE2O00115 360 aaPredicted RBP2.31□□□□□ -2.04
PRPF39-206ENST00000554429 CCL25O15444 150 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 LRATO95237 230 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 IGF1P05019 195 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 HOXB5P09067 269 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 SPNP16150 400 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 IMPDH1P20839 514 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 F2RP25116 425 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 EFNB2P52799 333 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 TAS2R31P59538 309 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 KRTAP10-9P60411 292 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 SNRPD2P62316 118 aaKnown RBP2.31□□□□□ -2.04
PRPF39-206ENST00000554429 TBPL1P62380 186 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 ADAM8P78325 824 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 SLC35B1P78383 322 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 PSG4Q00888 419 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 ST3GAL4Q11206 333 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 CDSNQ15517 529 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 OR1C1Q15619 314 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 TTLL9Q3SXZ7 439 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 CDNFQ49AH0 187 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 SYTL3Q4VX76 610 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 PAGE3Q5JUK9 113 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 CD276Q5ZPR3 534 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 RTL6Q6ICC9 239 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 ZNF367Q7RTV3 350 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 VRK3Q8IV63 474 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 BAP18Q8IXM2 172 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 ABHD12Q8N2K0 398 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 RNF175Q8N4F7 328 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 JAGN1Q8N5M9 183 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 ZNF676Q8N7Q3 588 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 GJC3Q8NFK1 279 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 OR4N2Q8NGD1 307 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 HAVCR2Q8TDQ0 301 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 CASTOR1Q8WTX7 329 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 NEU4Q8WWR8 484 aaPredicted RBP2.31□□□□□ -2.04
PRPF39-206ENST00000554429 FCAMRQ8WWV6 532 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 TMEM37Q8WXS4 190 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 SLC35G5Q96KT7 338 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 SNHG12Q9BXW3 62 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 PRRG4Q9BZD6 226 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 LPAR5Q9H1C0 372 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 FNDC4Q9H6D8 234 aaPredicted RBP2.31□□□□□ -2.04
PRPF39-206ENST00000554429 PATZ1Q9HBE1 687 aaKnown RBP2.31□□□□□ -2.04
PRPF39-206ENST00000554429 ELOVL5Q9NYP7 299 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 PRR13Q9NZ81 148 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 PURGQ9UJV8 347 aaKnown RBP2.31□□□□□ -2.04
PRPF39-206ENST00000554429 RCL1Q9Y2P8 373 aaKnown RBP2.31□□□□□ -2.04
PRPF39-206ENST00000554429 PRRC2CQ9Y520 2896 aaKnown RBP2.31□□□□□ -2.04
PRPF39-206ENST00000554429 KIAA1549Q9HCM3 1950 aa2.3□□□□□ -2.04
PRPF39-206ENST00000554429 SEC16AO15027 2179 aa2.3□□□□□ -2.04
PRPF39-206ENST00000554429 ZCWPW2A0A1B0GU75 182 aa2.3□□□□□ -2.04
PRPF39-206ENST00000554429 PRSS51A0A1B0GVH4 220 aa2.3□□□□□ -2.04
PRPF39-206ENST00000554429 A0A1W2PRD5 423 aa2.3□□□□□ -2.04
PRPF39-206ENST00000554429 ARPC2O15144 300 aa2.3□□□□□ -2.04
PRPF39-206ENST00000554429 SYT7O43581 403 aa2.3□□□□□ -2.04
PRPF39-206ENST00000554429 ZNF780AO75290 641 aaPredicted RBP2.3□□□□□ -2.04
PRPF39-206ENST00000554429 IL18BPO95998 194 aa2.3□□□□□ -2.04
PRPF39-206ENST00000554429 CATP04040 527 aaKnown RBP2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms