RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 SULT1C2O00338 296 aa7.29□□□□□ -1.24
TDP1-208ENST00000553989 DVL1O14640 695 aa7.29□□□□□ -1.24
TDP1-208ENST00000553989 PIN1P1O15428 100 aa7.29□□□□□ -1.24
TDP1-208ENST00000553989 XRCC3O43542 346 aa7.29□□□□□ -1.24
TDP1-208ENST00000553989 TSPAN15O95858 294 aa7.29□□□□□ -1.24
TDP1-208ENST00000553989 GYPBP06028 91 aa7.29□□□□□ -1.24
TDP1-208ENST00000553989 BTCP35070 178 aa7.29□□□□□ -1.24
TDP1-208ENST00000553989 NAA10P41227 235 aaPredicted RBP7.29□□□□□ -1.24
TDP1-208ENST00000553989 RPS27P42677 84 aaKnown RBP7.29□□□□□ -1.24
TDP1-208ENST00000553989 HCCSP53701 268 aa7.29□□□□□ -1.24
TDP1-208ENST00000553989 RAP2BP61225 183 aa7.29□□□□□ -1.24
TDP1-208ENST00000553989 DGCR2P98153 550 aa7.29□□□□□ -1.24
TDP1-208ENST00000553989 ZNF92Q03936 586 aa7.29□□□□□ -1.24
TDP1-208ENST00000553989 RSPO1Q2MKA7 263 aaPredicted RBP7.29□□□□□ -1.24
TDP1-208ENST00000553989 C2orf68Q2NKX9 166 aa7.29□□□□□ -1.24
TDP1-208ENST00000553989 SNAI3Q3KNW1 292 aa7.29□□□□□ -1.24
TDP1-208ENST00000553989 FAM27D1Q5T7N8 215 aa7.29□□□□□ -1.24
TDP1-208ENST00000553989 LINC01590Q5TEZ4 76 aa7.29□□□□□ -1.24
TDP1-208ENST00000553989 ASPHD2Q6ICH7 369 aa7.29□□□□□ -1.24
TDP1-208ENST00000553989 KCTD18Q6PI47 426 aaPredicted RBP7.29□□□□□ -1.24
TDP1-208ENST00000553989 TEX261Q6UWH6 196 aa7.29□□□□□ -1.24
TDP1-208ENST00000553989 ZNF826PQ6ZT77 177 aa7.29□□□□□ -1.24
TDP1-208ENST00000553989 RHOUQ7L0Q8 258 aa7.29□□□□□ -1.24
TDP1-208ENST00000553989 SSX6Q7RTT6 188 aa7.29□□□□□ -1.24
TDP1-208ENST00000553989 VMO1Q7Z5L0 202 aa7.29□□□□□ -1.24
TDP1-208ENST00000553989 SPERTQ8NA61 448 aa7.29□□□□□ -1.24
TDP1-208ENST00000553989 UXS1Q8NBZ7 420 aa7.29□□□□□ -1.24
TDP1-208ENST00000553989 OR56B2PQ8NGI1 322 aa7.29□□□□□ -1.24
TDP1-208ENST00000553989 OR6K6Q8NGW6 343 aa7.29□□□□□ -1.24
TDP1-208ENST00000553989 OR14A2Q96R54 314 aa7.29□□□□□ -1.24
TDP1-208ENST00000553989 ZNF436Q9C0F3 470 aaPredicted RBP7.29□□□□□ -1.24
TDP1-208ENST00000553989 SIRPDQ9H106 197 aa7.29□□□□□ -1.24
TDP1-208ENST00000553989 MRPL15Q9P015 296 aaKnown RBP7.29□□□□□ -1.24
TDP1-208ENST00000553989 DNAJB11Q9UBS4 358 aa7.29□□□□□ -1.24
TDP1-208ENST00000553989 CYB5R1Q9UHQ9 305 aa7.29□□□□□ -1.24
TDP1-208ENST00000553989 LAMP5Q9UJQ1 280 aa7.29□□□□□ -1.24
TDP1-208ENST00000553989 FOXJ3Q9UPW0 622 aa7.29□□□□□ -1.24
TDP1-208ENST00000553989 U3KQ87 197 aa7.29□□□□□ -1.24
TDP1-208ENST00000553989 TRBV5-7A0A0A0MS05 114 aa7.28□□□□□ -1.24
TDP1-208ENST00000553989 A0A1W2PPK0 400 aa7.28□□□□□ -1.24
TDP1-208ENST00000553989 A0A1W2PRD5 423 aa7.28□□□□□ -1.24
TDP1-208ENST00000553989 A0A1W2PRF3 423 aa7.28□□□□□ -1.24
TDP1-208ENST00000553989 A0A1W2PRM7 423 aa7.28□□□□□ -1.24
TDP1-208ENST00000553989 ANKRD20A5PA0PJZ0 165 aa7.28□□□□□ -1.24
TDP1-208ENST00000553989 TVP23AA6NH52 213 aa7.28□□□□□ -1.24
TDP1-208ENST00000553989 ANKRD30BLA7E2S9 258 aa7.28□□□□□ -1.24
TDP1-208ENST00000553989 SHOXO15266 292 aa7.28□□□□□ -1.24
TDP1-208ENST00000553989 AKR7A2O43488 359 aa7.28□□□□□ -1.24
TDP1-208ENST00000553989 EIF4EBP3O60516 100 aaPredicted RBP7.28□□□□□ -1.24
TDP1-208ENST00000553989 ZFPL1O95159 310 aa7.28□□□□□ -1.24
TDP1-208ENST00000553989 FBP1P09467 338 aa7.28□□□□□ -1.24
TDP1-208ENST00000553989 CSF1P09603 554 aa7.28□□□□□ -1.24
TDP1-208ENST00000553989 SLC2A1P11166 492 aa7.28□□□□□ -1.24
TDP1-208ENST00000553989 ALOX5APP20292 161 aa7.28□□□□□ -1.24
TDP1-208ENST00000553989 IER3P46695 156 aa7.28□□□□□ -1.24
TDP1-208ENST00000553989 PRKXP51817 358 aa7.28□□□□□ -1.24
TDP1-208ENST00000553989 AP2S1P53680 142 aaPredicted RBP7.28□□□□□ -1.24
TDP1-208ENST00000553989 P2RX3P56373 397 aa7.28□□□□□ -1.24
TDP1-208ENST00000553989 KRTAP10-3P60369 221 aa7.28□□□□□ -1.24
TDP1-208ENST00000553989 GMFBP60983 142 aa7.28□□□□□ -1.24
TDP1-208ENST00000553989 MADCAM1Q13477 382 aa7.28□□□□□ -1.24
TDP1-208ENST00000553989 GRK1Q15835 563 aa7.28□□□□□ -1.24
TDP1-208ENST00000553989 MICBQ29980 383 aa7.28□□□□□ -1.24
TDP1-208ENST00000553989 KRTAP27-1Q3LI81 207 aa7.28□□□□□ -1.24
TDP1-208ENST00000553989 TMEM69Q5SWH9 247 aa7.28□□□□□ -1.24
TDP1-208ENST00000553989 GLYATL3Q5SZD4 288 aa7.28□□□□□ -1.24
TDP1-208ENST00000553989 LDLRAD3Q86YD5 345 aa7.28□□□□□ -1.24
TDP1-208ENST00000553989 FAM90A1Q86YD7 464 aa7.28□□□□□ -1.24
TDP1-208ENST00000553989 TIGD4Q8IY51 512 aa7.28□□□□□ -1.24
TDP1-208ENST00000553989 ZNF676Q8N7Q3 588 aa7.28□□□□□ -1.24
TDP1-208ENST00000553989 ZNF680Q8NEM1 530 aa7.28□□□□□ -1.24
TDP1-208ENST00000553989 LGALS14Q8TCE9 139 aa7.28□□□□□ -1.24
TDP1-208ENST00000553989 LRRC29Q8WV35 223 aa7.28□□□□□ -1.24
TDP1-208ENST00000553989 MAP6Q96JE9 813 aa7.28□□□□□ -1.24
TDP1-208ENST00000553989 INTS14Q96SY0 518 aa7.28□□□□□ -1.24
TDP1-208ENST00000553989 PDCD1LG2Q9BQ51 273 aa7.28□□□□□ -1.24
TDP1-208ENST00000553989 ALX4Q9H161 411 aaPredicted RBP7.28□□□□□ -1.24
TDP1-208ENST00000553989 CNTD2Q9H8S5 307 aa7.28□□□□□ -1.24
TDP1-208ENST00000553989 PNRC2Q9NPJ4 139 aaKnown RBP7.28□□□□□ -1.24
TDP1-208ENST00000553989 SIRT7Q9NRC8 400 aa7.28□□□□□ -1.24
TDP1-208ENST00000553989 CENPMQ9NSP4 180 aa7.28□□□□□ -1.24
TDP1-208ENST00000553989 STEAP1Q9UHE8 339 aa7.28□□□□□ -1.24
TDP1-208ENST00000553989 ZNF107Q9UII5 783 aaPredicted RBP7.28□□□□□ -1.24
TDP1-208ENST00000553989 KCNG2Q9UJ96 466 aa7.28□□□□□ -1.24
TDP1-208ENST00000553989 COPS3Q9UNS2 423 aa7.28□□□□□ -1.24
TDP1-208ENST00000553989 TGP01266 2768 aa7.27□□□□□ -1.25
TDP1-208ENST00000553989 A0A0A6YYH2 397 aa7.27□□□□□ -1.25
TDP1-208ENST00000553989 UBE2QL1A1L167 161 aa7.27□□□□□ -1.25
TDP1-208ENST00000553989 A6NIN4 97 aa7.27□□□□□ -1.25
TDP1-208ENST00000553989 A6NJ64 397 aa7.27□□□□□ -1.25
TDP1-208ENST00000553989 ANXA2P2A6NMY6 339 aa7.27□□□□□ -1.25
TDP1-208ENST00000553989 OR4C45A6NMZ5 311 aa7.27□□□□□ -1.25
TDP1-208ENST00000553989 SELENOFO60613 162 aa7.27□□□□□ -1.25
TDP1-208ENST00000553989 ZNF254O75437 659 aa7.27□□□□□ -1.25
TDP1-208ENST00000553989 RGS11O94810 467 aa7.27□□□□□ -1.25
TDP1-208ENST00000553989 OR2A4O95047 310 aa7.27□□□□□ -1.25
TDP1-208ENST00000553989 ANXA2P07355 339 aaKnown RBP7.27□□□□□ -1.25
TDP1-208ENST00000553989 SPARCP09486 303 aa7.27□□□□□ -1.25
TDP1-208ENST00000553989 GIPP09681 153 aaPredicted RBP7.27□□□□□ -1.25
TDP1-208ENST00000553989 CD37P11049 281 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms