RNA–Protein interactions for RNA: ENST00000553888.5

VIPAS39-206, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VIPAS39, Length 2,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-206ENST00000553888 OR14J1Q9UGF5 321 aa10.8□□□□□ -0.68
VIPAS39-206ENST00000553888 ZNF835Q9Y2P0 537 aa10.8□□□□□ -0.68
VIPAS39-206ENST00000553888 PKDREJQ9NTG1 2253 aa10.8□□□□□ -0.68
VIPAS39-206ENST00000553888 MPTX1A8MV57 137 aa10.79□□□□□ -0.68
VIPAS39-206ENST00000553888 B8ZZF3 427 aa10.79□□□□□ -0.68
VIPAS39-206ENST00000553888 ZNF81P51508 661 aa10.79□□□□□ -0.68
VIPAS39-206ENST00000553888 RAP2BP61225 183 aa10.79□□□□□ -0.68
VIPAS39-206ENST00000553888 EIF2S3LQ2VIR3 472 aaKnown RBP10.79□□□□□ -0.68
VIPAS39-206ENST00000553888 ANKRD55Q3KP44 614 aa10.79□□□□□ -0.68
VIPAS39-206ENST00000553888 RGS7BPQ6MZT1 257 aaPredicted RBP10.79□□□□□ -0.68
VIPAS39-206ENST00000553888 Q6P435 159 aa10.79□□□□□ -0.68
VIPAS39-206ENST00000553888 MEX3BQ6ZN04 569 aaKnown RBP10.79□□□□□ -0.68
VIPAS39-206ENST00000553888 MITD1Q8WV92 249 aa10.79□□□□□ -0.68
VIPAS39-206ENST00000553888 FXYD6Q9H0Q3 95 aa10.79□□□□□ -0.68
VIPAS39-206ENST00000553888 ZNF286AQ9HBT8 521 aa10.79□□□□□ -0.68
VIPAS39-206ENST00000553888 TRAV20A0A0B4J274 112 aa10.79□□□□□ -0.68
VIPAS39-206ENST00000553888 CEACAM18A8MTB9 384 aa10.79□□□□□ -0.68
VIPAS39-206ENST00000553888 MCRIP1C9JLW8 97 aa10.79□□□□□ -0.68
VIPAS39-206ENST00000553888 ADAP1O75689 374 aa10.79□□□□□ -0.68
VIPAS39-206ENST00000553888 NXPH2O95156 264 aa10.79□□□□□ -0.68
VIPAS39-206ENST00000553888 RCC1P18754 421 aaPredicted RBP10.79□□□□□ -0.68
VIPAS39-206ENST00000553888 CXCL2P19875 107 aa10.79□□□□□ -0.68
VIPAS39-206ENST00000553888 G0S2P27469 103 aa10.79□□□□□ -0.68
VIPAS39-206ENST00000553888 ERVK11-1P61568 191 aa10.79□□□□□ -0.68
VIPAS39-206ENST00000553888 MPV17LQ2QL34 196 aa10.79□□□□□ -0.68
VIPAS39-206ENST00000553888 TMEM128Q5BJH2 165 aa10.79□□□□□ -0.68
VIPAS39-206ENST00000553888 OR2Z1Q8NG97 314 aa10.79□□□□□ -0.68
VIPAS39-206ENST00000553888 DPCDQ9BVM2 203 aaPredicted RBP10.79□□□□□ -0.68
VIPAS39-206ENST00000553888 FXYD6-FXYD2A0A087WZ82 144 aa10.78□□□□□ -0.68
VIPAS39-206ENST00000553888 RGS13O14921 159 aa10.78□□□□□ -0.68
VIPAS39-206ENST00000553888 BET1O15155 118 aa10.78□□□□□ -0.68
VIPAS39-206ENST00000553888 OR2H2O95918 312 aa10.78□□□□□ -0.68
VIPAS39-206ENST00000553888 NAPSAO96009 420 aa10.78□□□□□ -0.68
VIPAS39-206ENST00000553888 PGA5P0DJD9 388 aa10.78□□□□□ -0.68
VIPAS39-206ENST00000553888 RPS2P15880 293 aaKnown RBP10.78□□□□□ -0.68
VIPAS39-206ENST00000553888 KITLGP21583 273 aa10.78□□□□□ -0.68
VIPAS39-206ENST00000553888 HERPUD1Q15011 391 aa10.78□□□□□ -0.68
VIPAS39-206ENST00000553888 GRK1Q15835 563 aa10.78□□□□□ -0.68
VIPAS39-206ENST00000553888 TMEM211Q6ICI0 200 aa10.78□□□□□ -0.68
VIPAS39-206ENST00000553888 STX12Q86Y82 276 aa10.78□□□□□ -0.68
VIPAS39-206ENST00000553888 OR5M8Q8NGP6 311 aa10.78□□□□□ -0.68
VIPAS39-206ENST00000553888 GPHA2Q96T91 129 aa10.78□□□□□ -0.68
VIPAS39-206ENST00000553888 NRIP2Q9BQI9 281 aa10.78□□□□□ -0.68
VIPAS39-206ENST00000553888 TRAV14DV4A0A0A6YYC5 116 aa10.78□□□□□ -0.68
VIPAS39-206ENST00000553888 MEX3AA1L020 520 aaKnown RBP10.78□□□□□ -0.68
VIPAS39-206ENST00000553888 FAM90A10PA6NDY2 464 aa10.78□□□□□ -0.68
VIPAS39-206ENST00000553888 FAM90A18PA6NE21 464 aa10.78□□□□□ -0.68
VIPAS39-206ENST00000553888 FAM90A16PA6NEW6 464 aa10.78□□□□□ -0.68
VIPAS39-206ENST00000553888 FAM90A20PA6NIJ5 464 aa10.78□□□□□ -0.68
VIPAS39-206ENST00000553888 FAM90A8PA6NJQ4 464 aa10.78□□□□□ -0.68
VIPAS39-206ENST00000553888 FAM90A7PA6NKC0 464 aa10.78□□□□□ -0.68
VIPAS39-206ENST00000553888 FAM90A22PA8MWA6 464 aa10.78□□□□□ -0.68
VIPAS39-206ENST00000553888 FAM90A12PA8MX19 464 aa10.78□□□□□ -0.68
VIPAS39-206ENST00000553888 FAM90A5PA8MXJ8 464 aa10.78□□□□□ -0.68
VIPAS39-206ENST00000553888 FAM90A23PA8MXZ1 464 aa10.78□□□□□ -0.68
VIPAS39-206ENST00000553888 DEGS1O15121 323 aa10.78□□□□□ -0.68
VIPAS39-206ENST00000553888 FAM90A15PP0C7V4 464 aa10.78□□□□□ -0.68
VIPAS39-206ENST00000553888 FAM90A13PP0C7W8 464 aa10.78□□□□□ -0.68
VIPAS39-206ENST00000553888 FAM90A14PP0C7W9 464 aa10.78□□□□□ -0.68
VIPAS39-206ENST00000553888 FAM90A24PP0C7X0 464 aa10.78□□□□□ -0.68
VIPAS39-206ENST00000553888 PPP3CBP16298 524 aa10.78□□□□□ -0.68
VIPAS39-206ENST00000553888 ATXN7L3Q14CW9 347 aaPredicted RBP10.78□□□□□ -0.68
VIPAS39-206ENST00000553888 MBNL2Q5VZF2 373 aaKnown RBP10.78□□□□□ -0.68
VIPAS39-206ENST00000553888 TMEM185AQ8NFB2 350 aa10.78□□□□□ -0.68
VIPAS39-206ENST00000553888 OR11L1Q8NGX0 322 aa10.78□□□□□ -0.68
VIPAS39-206ENST00000553888 PLPPR1Q8TBJ4 325 aa10.78□□□□□ -0.68
VIPAS39-206ENST00000553888 MRPL30Q8TCC3 161 aaKnown RBP10.78□□□□□ -0.68
VIPAS39-206ENST00000553888 ELMOD3Q96FG2 381 aa10.78□□□□□ -0.68
VIPAS39-206ENST00000553888 PHB2Q99623 299 aa10.78□□□□□ -0.68
VIPAS39-206ENST00000553888 TRAF4Q9BUZ4 470 aaPredicted RBP10.78□□□□□ -0.68
VIPAS39-206ENST00000553888 Q9N2K0 584 aa10.78□□□□□ -0.68
VIPAS39-206ENST00000553888 CBY1Q9Y3M2 126 aa10.78□□□□□ -0.68
VIPAS39-206ENST00000553888 IGKV1-6A0A0C4DH72 117 aa10.78□□□□□ -0.68
VIPAS39-206ENST00000553888 C13orf42A0A1B0GVH6 325 aa10.78□□□□□ -0.68
VIPAS39-206ENST00000553888 ARPC5O15511 151 aa10.78□□□□□ -0.68
VIPAS39-206ENST00000553888 KCNAB3O43448 404 aa10.78□□□□□ -0.68
VIPAS39-206ENST00000553888 DUS4LO95620 317 aaKnown RBP10.78□□□□□ -0.68
VIPAS39-206ENST00000553888 CRYAAP02489 173 aa10.78□□□□□ -0.68
VIPAS39-206ENST00000553888 AADACP22760 399 aa10.78□□□□□ -0.68
VIPAS39-206ENST00000553888 SEC61A1P61619 476 aaKnown RBP10.78□□□□□ -0.68
VIPAS39-206ENST00000553888 DHODHQ02127 395 aa10.78□□□□□ -0.68
VIPAS39-206ENST00000553888 PHLDA2Q53GA4 152 aa10.78□□□□□ -0.68
VIPAS39-206ENST00000553888 WFDC8Q8IUA0 241 aa10.78□□□□□ -0.68
VIPAS39-206ENST00000553888 OR5T2Q8NGG2 359 aa10.78□□□□□ -0.68
VIPAS39-206ENST00000553888 PDCD10Q9BUL8 212 aa10.78□□□□□ -0.68
VIPAS39-206ENST00000553888 TRGV8A0A0C4DH27 118 aa10.77□□□□□ -0.69
VIPAS39-206ENST00000553888 hCG_1807616A0A1W2PRN6 198 aa10.77□□□□□ -0.69
VIPAS39-206ENST00000553888 PLSCR5A0PG75 271 aa10.77□□□□□ -0.69
VIPAS39-206ENST00000553888 SFT2D2O95562 160 aa10.77□□□□□ -0.69
VIPAS39-206ENST00000553888 HOXD4P09016 255 aaPredicted RBP10.77□□□□□ -0.69
VIPAS39-206ENST00000553888 TAGLN2P37802 199 aaKnown RBP10.77□□□□□ -0.69
VIPAS39-206ENST00000553888 P2RX3P56373 397 aa10.77□□□□□ -0.69
VIPAS39-206ENST00000553888 SLC33A1O00400 549 aaPredicted RBP10.77□□□□□ -0.69
VIPAS39-206ENST00000553888 MPC2O95563 127 aa10.77□□□□□ -0.69
VIPAS39-206ENST00000553888 M6PRP20645 277 aa10.77□□□□□ -0.69
VIPAS39-206ENST00000553888 SP6Q3SY56 376 aa10.77□□□□□ -0.69
VIPAS39-206ENST00000553888 PAN3Q58A45 887 aaKnown RBP10.77□□□□□ -0.69
VIPAS39-206ENST00000553888 DHRS11Q6UWP2 260 aa10.77□□□□□ -0.69
VIPAS39-206ENST00000553888 WDR82Q6UXN9 313 aa10.77□□□□□ -0.69
VIPAS39-206ENST00000553888 MRGPRGQ86SM5 289 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms