RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 ERP29P30040 261 aaKnown RBP6.85□□□□□ -1.31
PSEN1-209ENST00000553855 MLLT11Q13015 90 aaPredicted RBP6.85□□□□□ -1.31
PSEN1-209ENST00000553855 IL13RA2Q14627 380 aa6.85□□□□□ -1.31
PSEN1-209ENST00000553855 PAN3Q58A45 887 aaKnown RBP6.85□□□□□ -1.31
PSEN1-209ENST00000553855 LIPKQ5VXJ0 399 aa6.85□□□□□ -1.31
PSEN1-209ENST00000553855 TMEM200BQ69YZ2 307 aa6.85□□□□□ -1.31
PSEN1-209ENST00000553855 AWAT2Q6E213 333 aa6.85□□□□□ -1.31
PSEN1-209ENST00000553855 ELP2Q6IA86 826 aa6.85□□□□□ -1.31
PSEN1-209ENST00000553855 ZNF529Q6P280 563 aa6.85□□□□□ -1.31
PSEN1-209ENST00000553855 ETV3LQ6ZN32 361 aa6.85□□□□□ -1.31
PSEN1-209ENST00000553855 ZNF367Q7RTV3 350 aa6.85□□□□□ -1.31
PSEN1-209ENST00000553855 LINC00596Q86U02 117 aa6.85□□□□□ -1.31
PSEN1-209ENST00000553855 OSR2Q8N2R0 312 aa6.85□□□□□ -1.31
PSEN1-209ENST00000553855 FGFRL1Q8N441 504 aa6.85□□□□□ -1.31
PSEN1-209ENST00000553855 OR13D1Q8NGV5 346 aa6.85□□□□□ -1.31
PSEN1-209ENST00000553855 NEK7Q8TDX7 302 aa6.85□□□□□ -1.31
PSEN1-209ENST00000553855 PHYHIPQ92561 330 aa6.85□□□□□ -1.31
PSEN1-209ENST00000553855 SLC25A28Q96A46 364 aa6.85□□□□□ -1.31
PSEN1-209ENST00000553855 ZNF714Q96N38 554 aa6.85□□□□□ -1.31
PSEN1-209ENST00000553855 DERL3Q96Q80 235 aa6.85□□□□□ -1.31
PSEN1-209ENST00000553855 OR5M11Q96RB7 305 aa6.85□□□□□ -1.31
PSEN1-209ENST00000553855 MGLLQ99685 303 aa6.85□□□□□ -1.31
PSEN1-209ENST00000553855 BARHL1Q9BZE3 327 aa6.85□□□□□ -1.31
PSEN1-209ENST00000553855 CHST6Q9GZX3 395 aa6.85□□□□□ -1.31
PSEN1-209ENST00000553855 GAL3ST2Q9H3Q3 398 aa6.85□□□□□ -1.31
PSEN1-209ENST00000553855 SPACA1Q9HBV2 294 aa6.85□□□□□ -1.31
PSEN1-209ENST00000553855 C19orf12Q9NSK7 152 aa6.85□□□□□ -1.31
PSEN1-209ENST00000553855 ST3GAL6Q9Y274 331 aa6.85□□□□□ -1.31
PSEN1-209ENST00000553855 MRPS28Q9Y2Q9 187 aaKnown RBP6.85□□□□□ -1.31
PSEN1-209ENST00000553855 JMJD1CQ15652 2540 aa6.84□□□□□ -1.31
PSEN1-209ENST00000553855 TRBV5-7A0A0A0MS05 114 aa6.84□□□□□ -1.31
PSEN1-209ENST00000553855 IGKV1-12A0A0C4DH73 117 aa6.84□□□□□ -1.31
PSEN1-209ENST00000553855 A0A1W2PRD5 423 aa6.84□□□□□ -1.31
PSEN1-209ENST00000553855 A0A1W2PRF3 423 aa6.84□□□□□ -1.31
PSEN1-209ENST00000553855 A0A1W2PRM7 423 aa6.84□□□□□ -1.31
PSEN1-209ENST00000553855 MEIOCA2RUB1 952 aa6.84□□□□□ -1.31
PSEN1-209ENST00000553855 OR7C1O76099 320 aaPredicted RBP6.84□□□□□ -1.31
PSEN1-209ENST00000553855 CDRT1O95170 752 aa6.84□□□□□ -1.31
PSEN1-209ENST00000553855 VENTXO95231 258 aa6.84□□□□□ -1.31
PSEN1-209ENST00000553855 IGKV1D-12P01611 117 aa6.84□□□□□ -1.31
PSEN1-209ENST00000553855 UBBP0CG47 229 aa6.84□□□□□ -1.31
PSEN1-209ENST00000553855 ZNF728P0DKX0 622 aa6.84□□□□□ -1.31
PSEN1-209ENST00000553855 IGFBP3P17936 291 aaPredicted RBP6.84□□□□□ -1.31
PSEN1-209ENST00000553855 SERPINA2P20848 420 aa6.84□□□□□ -1.31
PSEN1-209ENST00000553855 OR3A4PP47883 348 aa6.84□□□□□ -1.31
PSEN1-209ENST00000553855 KCNJ3P48549 501 aa6.84□□□□□ -1.31
PSEN1-209ENST00000553855 UBE2E1P51965 193 aa6.84□□□□□ -1.31
PSEN1-209ENST00000553855 P2RX3P56373 397 aa6.84□□□□□ -1.31
PSEN1-209ENST00000553855 ZP1P60852 638 aa6.84□□□□□ -1.31
PSEN1-209ENST00000553855 RPS11P62280 158 aaKnown RBP eCLIP6.84□□□□□ -1.31
PSEN1-209ENST00000553855 TPBGQ13641 420 aa6.84□□□□□ -1.31
PSEN1-209ENST00000553855 IRF3Q14653 427 aa6.84□□□□□ -1.31
PSEN1-209ENST00000553855 TBCEQ15813 527 aaPredicted RBP6.84□□□□□ -1.31
PSEN1-209ENST00000553855 SLC22A6Q4U2R8 563 aa6.84□□□□□ -1.31
PSEN1-209ENST00000553855 KRBOX4Q5JUW0 171 aa6.84□□□□□ -1.31
PSEN1-209ENST00000553855 ATAD3CQ5T2N8 411 aa6.84□□□□□ -1.31
PSEN1-209ENST00000553855 RUSC1-AS1Q66K80 236 aa6.84□□□□□ -1.31
PSEN1-209ENST00000553855 OR52W1Q6IF63 320 aa6.84□□□□□ -1.31
PSEN1-209ENST00000553855 METAP1DQ6UB28 335 aaPredicted RBP6.84□□□□□ -1.31
PSEN1-209ENST00000553855 GLIPR1L1Q6UWM5 242 aa6.84□□□□□ -1.31
PSEN1-209ENST00000553855 BCL6BQ8N143 479 aaPredicted RBP6.84□□□□□ -1.31
PSEN1-209ENST00000553855 OR10K1Q8NGX5 313 aa6.84□□□□□ -1.31
PSEN1-209ENST00000553855 FCGR1BQ92637 280 aa6.84□□□□□ -1.31
PSEN1-209ENST00000553855 GCDHQ92947 438 aaPredicted RBP6.84□□□□□ -1.31
PSEN1-209ENST00000553855 TMEM203Q969S6 136 aa6.84□□□□□ -1.31
PSEN1-209ENST00000553855 MUL1Q969V5 352 aa6.84□□□□□ -1.31
PSEN1-209ENST00000553855 MRPS24Q96EL2 167 aaKnown RBP6.84□□□□□ -1.31
PSEN1-209ENST00000553855 UQCC2Q9BRT2 126 aa6.84□□□□□ -1.31
PSEN1-209ENST00000553855 C19orf24Q9BVV8 132 aa6.84□□□□□ -1.31
PSEN1-209ENST00000553855 CST11Q9H112 138 aa6.84□□□□□ -1.31
PSEN1-209ENST00000553855 PPA2Q9H2U2 334 aa6.84□□□□□ -1.31
PSEN1-209ENST00000553855 DPAGT1Q9H3H5 408 aa6.84□□□□□ -1.31
PSEN1-209ENST00000553855 ACOT13Q9NPJ3 140 aa6.84□□□□□ -1.31
PSEN1-209ENST00000553855 MBNL3Q9NUK0 354 aaKnown RBP6.84□□□□□ -1.31
PSEN1-209ENST00000553855 ING3Q9NXR8 418 aa6.84□□□□□ -1.31
PSEN1-209ENST00000553855 IL36GQ9NZH8 169 aa6.84□□□□□ -1.31
PSEN1-209ENST00000553855 OR6C3Q9NZP0 311 aa6.84□□□□□ -1.31
PSEN1-209ENST00000553855 IL36RNQ9UBH0 155 aa6.84□□□□□ -1.31
PSEN1-209ENST00000553855 GHRLQ9UBU3 117 aa6.84□□□□□ -1.31
PSEN1-209ENST00000553855 SCOCQ9UIL1 159 aa6.84□□□□□ -1.31
PSEN1-209ENST00000553855 LINC00312Q9Y6C7 94 aa6.84□□□□□ -1.31
PSEN1-209ENST00000553855 TRAV8-7A0A075B6U6 113 aa6.83□□□□□ -1.32
PSEN1-209ENST00000553855 A0A0G2JK05 382 aa6.83□□□□□ -1.32
PSEN1-209ENST00000553855 HSPB6O14558 160 aa6.83□□□□□ -1.32
PSEN1-209ENST00000553855 PDCD5O14737 125 aa6.83□□□□□ -1.32
PSEN1-209ENST00000553855 NPFFO15130 113 aa6.83□□□□□ -1.32
PSEN1-209ENST00000553855 ZNF737O75373 536 aa6.83□□□□□ -1.32
PSEN1-209ENST00000553855 CRTAPO75718 401 aaPredicted RBP6.83□□□□□ -1.32
PSEN1-209ENST00000553855 RBP4P02753 201 aa6.83□□□□□ -1.32
PSEN1-209ENST00000553855 RNASE1P07998 156 aaKnown RBP6.83□□□□□ -1.32
PSEN1-209ENST00000553855 CCL3L1P16619 93 aa6.83□□□□□ -1.32
PSEN1-209ENST00000553855 SRMP19623 302 aa6.83□□□□□ -1.32
PSEN1-209ENST00000553855 COX7A1P24310 79 aa6.83□□□□□ -1.32
PSEN1-209ENST00000553855 MYL9P24844 172 aa6.83□□□□□ -1.32
PSEN1-209ENST00000553855 GABRA5P31644 462 aa6.83□□□□□ -1.32
PSEN1-209ENST00000553855 MAP2K4P45985 399 aa6.83□□□□□ -1.32
PSEN1-209ENST00000553855 PSMD7P51665 324 aa6.83□□□□□ -1.32
PSEN1-209ENST00000553855 UBA52P62987 128 aaKnown RBP6.83□□□□□ -1.32
PSEN1-209ENST00000553855 DYNC1I2Q13409 638 aaKnown RBP6.83□□□□□ -1.32
PSEN1-209ENST00000553855 RBM39Q14498 530 aaKnown RBP6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms