RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 NEK7Q8TDX7 302 aa4.21□□□□□ -1.74
VTI1B-202ENST00000553619 LRRC29Q8WV35 223 aa4.21□□□□□ -1.74
VTI1B-202ENST00000553619 GTF3AQ92664 365 aaKnown RBP4.21□□□□□ -1.74
VTI1B-202ENST00000553619 RDH5Q92781 318 aa4.21□□□□□ -1.74
VTI1B-202ENST00000553619 NEUROG1Q92886 237 aa4.21□□□□□ -1.74
VTI1B-202ENST00000553619 SLC25A38Q96DW6 304 aa4.21□□□□□ -1.74
VTI1B-202ENST00000553619 C14orf79Q96F83 325 aa4.21□□□□□ -1.74
VTI1B-202ENST00000553619 TIMD4Q96H15 378 aa4.21□□□□□ -1.74
VTI1B-202ENST00000553619 MED30Q96HR3 178 aa4.21□□□□□ -1.74
VTI1B-202ENST00000553619 SNX22Q96L94 193 aa4.21□□□□□ -1.74
VTI1B-202ENST00000553619 C1orf147Q96MC9 270 aaPredicted RBP4.21□□□□□ -1.74
VTI1B-202ENST00000553619 ABHD1Q96SE0 405 aa4.21□□□□□ -1.74
VTI1B-202ENST00000553619 CMSS1Q9BQ75 279 aaKnown RBP4.21□□□□□ -1.74
VTI1B-202ENST00000553619 TRAF4Q9BUZ4 470 aaPredicted RBP4.21□□□□□ -1.74
VTI1B-202ENST00000553619 PECRQ9BY49 303 aa4.21□□□□□ -1.74
VTI1B-202ENST00000553619 SRRQ9GZT4 340 aa4.21□□□□□ -1.74
VTI1B-202ENST00000553619 CHST6Q9GZX3 395 aa4.21□□□□□ -1.74
VTI1B-202ENST00000553619 DNTTIP1Q9H147 329 aa4.21□□□□□ -1.74
VTI1B-202ENST00000553619 AUNIPQ9H7T9 357 aa4.21□□□□□ -1.74
VTI1B-202ENST00000553619 IFT22Q9H7X7 185 aa4.21□□□□□ -1.74
VTI1B-202ENST00000553619 UBTD1Q9HAC8 227 aa4.21□□□□□ -1.74
VTI1B-202ENST00000553619 HES4Q9HCC6 221 aa4.21□□□□□ -1.74
VTI1B-202ENST00000553619 RAB9BQ9NP90 201 aa4.21□□□□□ -1.74
VTI1B-202ENST00000553619 MYOZ1Q9NP98 299 aaPredicted RBP4.21□□□□□ -1.74
VTI1B-202ENST00000553619 IFT46Q9NQC8 304 aa4.21□□□□□ -1.74
VTI1B-202ENST00000553619 ABCB10Q9NRK6 738 aa4.21□□□□□ -1.74
VTI1B-202ENST00000553619 TREM2Q9NZC2 230 aa4.21□□□□□ -1.74
VTI1B-202ENST00000553619 NLKQ9UBE8 527 aa4.21□□□□□ -1.74
VTI1B-202ENST00000553619 PPIAL4AQ9Y536 164 aa4.21□□□□□ -1.74
VTI1B-202ENST00000553619 V9GYH0 126 aa4.21□□□□□ -1.74
VTI1B-202ENST00000553619 ZFHX4Q86UP3 3567 aa4.21□□□□□ -1.74
VTI1B-202ENST00000553619 ARFGEF3Q5TH69 2177 aa4.2□□□□□ -1.74
VTI1B-202ENST00000553619 IGHV1-69-2A0A0G2JMI3 117 aa4.2□□□□□ -1.74
VTI1B-202ENST00000553619 A0A1W2PP11 408 aa4.2□□□□□ -1.74
VTI1B-202ENST00000553619 CLEC18AA5D8T8 446 aa4.2□□□□□ -1.74
VTI1B-202ENST00000553619 TMEM178BH3BS89 294 aa4.2□□□□□ -1.74
VTI1B-202ENST00000553619 H7C417 338 aa4.2□□□□□ -1.74
VTI1B-202ENST00000553619 J3QRK9 145 aa4.2□□□□□ -1.74
VTI1B-202ENST00000553619 LGALS8O00214 317 aa4.2□□□□□ -1.74
VTI1B-202ENST00000553619 GEMIN2O14893 280 aaKnown RBP4.2□□□□□ -1.74
VTI1B-202ENST00000553619 ORC5O43913 435 aa4.2□□□□□ -1.74
VTI1B-202ENST00000553619 LPLP06858 475 aa4.2□□□□□ -1.74
VTI1B-202ENST00000553619 CTXN2P0C2S0 81 aa4.2□□□□□ -1.74
VTI1B-202ENST00000553619 IL7P13232 177 aa4.2□□□□□ -1.74
VTI1B-202ENST00000553619 GNB3P16520 340 aa4.2□□□□□ -1.74
VTI1B-202ENST00000553619 SSTR2P30874 369 aa4.2□□□□□ -1.74
VTI1B-202ENST00000553619 PRDX2P32119 198 aa4.2□□□□□ -1.74
VTI1B-202ENST00000553619 GABRA2P47869 451 aa4.2□□□□□ -1.74
VTI1B-202ENST00000553619 OR3A3P47888 321 aa4.2□□□□□ -1.74
VTI1B-202ENST00000553619 PTH2RP49190 550 aa4.2□□□□□ -1.74
VTI1B-202ENST00000553619 TMEM50BP56557 158 aa4.2□□□□□ -1.74
VTI1B-202ENST00000553619 TMEM33P57088 247 aa4.2□□□□□ -1.74
VTI1B-202ENST00000553619 TAS2R19P59542 299 aa4.2□□□□□ -1.74
VTI1B-202ENST00000553619 DYRK1AQ13627 763 aa4.2□□□□□ -1.74
VTI1B-202ENST00000553619 MPPED2Q15777 294 aa4.2□□□□□ -1.74
VTI1B-202ENST00000553619 SRSF7Q16629 238 aaKnown RBP eCLIP4.2□□□□□ -1.74
VTI1B-202ENST00000553619 ACTBL2Q562R1 376 aa4.2□□□□□ -1.74
VTI1B-202ENST00000553619 ATPAF1Q5TC12 328 aaPredicted RBP4.2□□□□□ -1.74
VTI1B-202ENST00000553619 SHEQ5VZ18 495 aa4.2□□□□□ -1.74
VTI1B-202ENST00000553619 TRAT1Q6PIZ9 186 aa4.2□□□□□ -1.74
VTI1B-202ENST00000553619 CLEC18BQ6UXF7 455 aa4.2□□□□□ -1.74
VTI1B-202ENST00000553619 DNM1P46Q6ZS02 220 aa4.2□□□□□ -1.74
VTI1B-202ENST00000553619 ZNF826PQ6ZT77 177 aa4.2□□□□□ -1.74
VTI1B-202ENST00000553619 SLC36A1Q7Z2H8 476 aa4.2□□□□□ -1.74
VTI1B-202ENST00000553619 RNF144BQ7Z419 303 aa4.2□□□□□ -1.74
VTI1B-202ENST00000553619 WDR86Q86TI4 376 aa4.2□□□□□ -1.74
VTI1B-202ENST00000553619 TMEM17Q86X19 198 aa4.2□□□□□ -1.74
VTI1B-202ENST00000553619 MUC20Q8N307 709 aaPredicted RBP4.2□□□□□ -1.74
VTI1B-202ENST00000553619 ZNF561Q8N587 486 aa4.2□□□□□ -1.74
VTI1B-202ENST00000553619 ARL6IP6Q8N6S5 226 aa4.2□□□□□ -1.74
VTI1B-202ENST00000553619 BOLLQ8N9W6 283 aaKnown RBP4.2□□□□□ -1.74
VTI1B-202ENST00000553619 TMEM229BQ8NBD8 167 aa4.2□□□□□ -1.74
VTI1B-202ENST00000553619 CLEC18CQ8NCF0 446 aa4.2□□□□□ -1.74
VTI1B-202ENST00000553619 SUN5Q8TC36 379 aa4.2□□□□□ -1.74
VTI1B-202ENST00000553619 GPX8Q8TED1 209 aa4.2□□□□□ -1.74
VTI1B-202ENST00000553619 SMIM4Q8WVI0 70 aa4.2□□□□□ -1.74
VTI1B-202ENST00000553619 CCL17Q92583 94 aa4.2□□□□□ -1.74
VTI1B-202ENST00000553619 RAB1CQ92928 201 aa4.2□□□□□ -1.74
VTI1B-202ENST00000553619 ARHGAP5-AS1Q96IT6 56 aa4.2□□□□□ -1.74
VTI1B-202ENST00000553619 NKX3-1Q99801 234 aaPredicted RBP4.2□□□□□ -1.74
VTI1B-202ENST00000553619 NRIP2Q9BQI9 281 aa4.2□□□□□ -1.74
VTI1B-202ENST00000553619 NICN1Q9BSH3 213 aa4.2□□□□□ -1.74
VTI1B-202ENST00000553619 FGF23Q9GZV9 251 aaPredicted RBP4.2□□□□□ -1.74
VTI1B-202ENST00000553619 FAM234AQ9H0X4 552 aa4.2□□□□□ -1.74
VTI1B-202ENST00000553619 NCOR1P1Q9H4R4 102 aa4.2□□□□□ -1.74
VTI1B-202ENST00000553619 ZNF665Q9H7R5 613 aa4.2□□□□□ -1.74
VTI1B-202ENST00000553619 CHMP1AQ9HD42 196 aaPredicted RBP4.2□□□□□ -1.74
VTI1B-202ENST00000553619 TMEM106BQ9NUM4 274 aa4.2□□□□□ -1.74
VTI1B-202ENST00000553619 RBFOX1Q9NWB1 397 aaKnown RBP4.2□□□□□ -1.74
VTI1B-202ENST00000553619 KCNIP1Q9NZI2 227 aa4.2□□□□□ -1.74
VTI1B-202ENST00000553619 MTFP1Q9UDX5 166 aa4.2□□□□□ -1.74
VTI1B-202ENST00000553619 OR14J1Q9UGF5 321 aa4.2□□□□□ -1.74
VTI1B-202ENST00000553619 LAMP3Q9UQV4 416 aa4.2□□□□□ -1.74
VTI1B-202ENST00000553619 WIPI2Q9Y4P8 454 aa4.2□□□□□ -1.74
VTI1B-202ENST00000553619 MGAQ8IWI9 3026 aa4.2□□□□□ -1.74
VTI1B-202ENST00000553619 PLCE1Q9P212 2302 aa4.2□□□□□ -1.74
VTI1B-202ENST00000553619 KIR2DS1A0A191URI9 304 aa4.19□□□□□ -1.74
VTI1B-202ENST00000553619 OOEPA6NGQ2 149 aa4.19□□□□□ -1.74
VTI1B-202ENST00000553619 NKX6-3A6NJ46 265 aa4.19□□□□□ -1.74
VTI1B-202ENST00000553619 RFPL4AA6NLU0 287 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms