RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 PNLIPRP3Q17RR3 467 aa7.1□□□□□ -1.27
SYNE2-209ENST00000553308 NXNL2Q5VZ03 156 aa7.1□□□□□ -1.27
SYNE2-209ENST00000553308 ZFAND6Q6FIF0 208 aa7.1□□□□□ -1.27
SYNE2-209ENST00000553308 LHFPL2Q6ZUX7 228 aa7.1□□□□□ -1.27
SYNE2-209ENST00000553308 OVCH2Q7RTZ1 564 aa7.1□□□□□ -1.27
SYNE2-209ENST00000553308 OR8H3Q8N146 312 aa7.1□□□□□ -1.27
SYNE2-209ENST00000553308 TCEANCQ8N8B7 351 aa7.1□□□□□ -1.27
SYNE2-209ENST00000553308 RNF152Q8N8N0 203 aa7.1□□□□□ -1.27
SYNE2-209ENST00000553308 CCDC54Q8NEL0 328 aa7.1□□□□□ -1.27
SYNE2-209ENST00000553308 OR13A1Q8NGR1 328 aa7.1□□□□□ -1.27
SYNE2-209ENST00000553308 C4orf3Q8WVX3 66 aa7.1□□□□□ -1.27
SYNE2-209ENST00000553308 C10orf35Q96D05 121 aa7.1□□□□□ -1.27
SYNE2-209ENST00000553308 HRASLS5Q96KN8 279 aa7.1□□□□□ -1.27
SYNE2-209ENST00000553308 OPALINQ96PE5 141 aa7.1□□□□□ -1.27
SYNE2-209ENST00000553308 CALYQ9NYX4 217 aa7.1□□□□□ -1.27
SYNE2-209ENST00000553308 OR6C3Q9NZP0 311 aa7.1□□□□□ -1.27
SYNE2-209ENST00000553308 H2AFY2Q9P0M6 372 aaPredicted RBP7.1□□□□□ -1.27
SYNE2-209ENST00000553308 KIF25Q9UIL4 384 aa7.1□□□□□ -1.27
SYNE2-209ENST00000553308 PSG11Q9UQ72 335 aa7.1□□□□□ -1.27
SYNE2-209ENST00000553308 A0A1W2PPE3 182 aa7.09□□□□□ -1.27
SYNE2-209ENST00000553308 METTL15A6NJ78 407 aa7.09□□□□□ -1.27
SYNE2-209ENST00000553308 NCBP2LA6PVI3 153 aaKnown RBP7.09□□□□□ -1.27
SYNE2-209ENST00000553308 CCRL2O00421 344 aa7.09□□□□□ -1.27
SYNE2-209ENST00000553308 HSD17B6O14756 317 aa7.09□□□□□ -1.27
SYNE2-209ENST00000553308 IL1AP01583 271 aa7.09□□□□□ -1.27
SYNE2-209ENST00000553308 ELANEP08246 267 aa7.09□□□□□ -1.27
SYNE2-209ENST00000553308 UBCP0CG48 685 aaKnown RBP7.09□□□□□ -1.27
SYNE2-209ENST00000553308 PRKACBP22694 351 aa7.09□□□□□ -1.27
SYNE2-209ENST00000553308 EPHA2P29317 976 aa7.09□□□□□ -1.27
SYNE2-209ENST00000553308 REG1BP48304 166 aa7.09□□□□□ -1.27
SYNE2-209ENST00000553308 DAPP51397 102 aa7.09□□□□□ -1.27
SYNE2-209ENST00000553308 EFNB1P98172 346 aa7.09□□□□□ -1.27
SYNE2-209ENST00000553308 CFHR3Q02985 330 aa7.09□□□□□ -1.27
SYNE2-209ENST00000553308 EBI3Q14213 229 aa7.09□□□□□ -1.27
SYNE2-209ENST00000553308 CDK5R1Q15078 307 aa7.09□□□□□ -1.27
SYNE2-209ENST00000553308 ASPHD1Q5U4P2 390 aa7.09□□□□□ -1.27
SYNE2-209ENST00000553308 UTS2BQ765I0 119 aa7.09□□□□□ -1.27
SYNE2-209ENST00000553308 TGIF2LXQ8IUE1 241 aa7.09□□□□□ -1.27
SYNE2-209ENST00000553308 Q8N9W7 124 aa7.09□□□□□ -1.27
SYNE2-209ENST00000553308 CHST4Q8NCG5 386 aa7.09□□□□□ -1.27
SYNE2-209ENST00000553308 OR51T1Q8NGJ9 327 aa7.09□□□□□ -1.27
SYNE2-209ENST00000553308 RFESDQ8TAC1 157 aa7.09□□□□□ -1.27
SYNE2-209ENST00000553308 TMEM163Q8TC26 289 aa7.09□□□□□ -1.27
SYNE2-209ENST00000553308 RNF166Q96A37 237 aaPredicted RBP7.09□□□□□ -1.27
SYNE2-209ENST00000553308 SPSB1Q96BD6 273 aa7.09□□□□□ -1.27
SYNE2-209ENST00000553308 FGGYQ96C11 551 aa7.09□□□□□ -1.27
SYNE2-209ENST00000553308 RBMXL1Q96E39 390 aaKnown RBP7.09□□□□□ -1.27
SYNE2-209ENST00000553308 EAF1Q96JC9 268 aaPredicted RBP7.09□□□□□ -1.27
SYNE2-209ENST00000553308 IL4I1Q96RQ9 567 aa7.09□□□□□ -1.27
SYNE2-209ENST00000553308 HSPB9Q9BQS6 159 aa7.09□□□□□ -1.27
SYNE2-209ENST00000553308 OSBPL10Q9BXB5 764 aa7.09□□□□□ -1.27
SYNE2-209ENST00000553308 PRRG3Q9BZD7 231 aa7.09□□□□□ -1.27
SYNE2-209ENST00000553308 ABCG5Q9H222 651 aa7.09□□□□□ -1.27
SYNE2-209ENST00000553308 NEK6Q9HC98 313 aa7.09□□□□□ -1.27
SYNE2-209ENST00000553308 MED4Q9NPJ6 270 aa7.09□□□□□ -1.27
SYNE2-209ENST00000553308 LIN7CQ9NUP9 197 aaKnown RBP7.09□□□□□ -1.27
SYNE2-209ENST00000553308 IDI2-AS1Q9NZ38 188 aa7.09□□□□□ -1.27
SYNE2-209ENST00000553308 ARL2BPQ9Y2Y0 163 aa7.09□□□□□ -1.27
SYNE2-209ENST00000553308 DYNC2H1Q8NCM8 4307 aaKnown RBP7.09□□□□□ -1.27
SYNE2-209ENST00000553308 EPPK1P58107 5090 aaKnown RBP7.08□□□□□ -1.28
SYNE2-209ENST00000553308 MEIKINA0A087WXM9 373 aa7.08□□□□□ -1.28
SYNE2-209ENST00000553308 TRAV39A0A0B4J263 110 aa7.08□□□□□ -1.28
SYNE2-209ENST00000553308 IGHV1-3A0A0C4DH29 117 aa7.08□□□□□ -1.28
SYNE2-209ENST00000553308 H0YJX3 145 aa7.08□□□□□ -1.28
SYNE2-209ENST00000553308 DEGS1O15121 323 aa7.08□□□□□ -1.28
SYNE2-209ENST00000553308 MITFO75030 526 aaPredicted RBP7.08□□□□□ -1.28
SYNE2-209ENST00000553308 DCTN3O75935 186 aa7.08□□□□□ -1.28
SYNE2-209ENST00000553308 HCKP08631 526 aa7.08□□□□□ -1.28
SYNE2-209ENST00000553308 FRMD6-AS1P0C7T7 363 aa7.08□□□□□ -1.28
SYNE2-209ENST00000553308 ZNF20P17024 532 aa7.08□□□□□ -1.28
SYNE2-209ENST00000553308 SSTR5P35346 364 aa7.08□□□□□ -1.28
SYNE2-209ENST00000553308 ZNF816Q0VGE8 651 aaPredicted RBP7.08□□□□□ -1.28
SYNE2-209ENST00000553308 TP53I3Q53FA7 332 aa7.08□□□□□ -1.28
SYNE2-209ENST00000553308 C12orf73Q69YU5 71 aa7.08□□□□□ -1.28
SYNE2-209ENST00000553308 FAHD1Q6P587 224 aa7.08□□□□□ -1.28
SYNE2-209ENST00000553308 ADAMTSL5Q6ZMM2 481 aa7.08□□□□□ -1.28
SYNE2-209ENST00000553308 MOB3BQ86TA1 216 aa7.08□□□□□ -1.28
SYNE2-209ENST00000553308 GID4Q8IVV7 300 aa7.08□□□□□ -1.28
SYNE2-209ENST00000553308 IZUMO1Q8IYV9 350 aa7.08□□□□□ -1.28
SYNE2-209ENST00000553308 Q8N6K4 173 aa7.08□□□□□ -1.28
SYNE2-209ENST00000553308 OR11H1Q8NG94 326 aa7.08□□□□□ -1.28
SYNE2-209ENST00000553308 OR10H4Q8NGA5 316 aa7.08□□□□□ -1.28
SYNE2-209ENST00000553308 OR13C9Q8NGT0 318 aa7.08□□□□□ -1.28
SYNE2-209ENST00000553308 OR10X1Q8NGY0 326 aa7.08□□□□□ -1.28
SYNE2-209ENST00000553308 OR10AC1Q8NH08 325 aa7.08□□□□□ -1.28
SYNE2-209ENST00000553308 HAVCR2Q8TDQ0 301 aa7.08□□□□□ -1.28
SYNE2-209ENST00000553308 MRGPRDQ8TDS7 321 aa7.08□□□□□ -1.28
SYNE2-209ENST00000553308 DNAJC9Q8WXX5 260 aa7.08□□□□□ -1.28
SYNE2-209ENST00000553308 GON7Q9BXV9 100 aa7.08□□□□□ -1.28
SYNE2-209ENST00000553308 LINC00574Q9H8X3 128 aa7.08□□□□□ -1.28
SYNE2-209ENST00000553308 ISYNA1Q9NPH2 558 aa7.08□□□□□ -1.28
SYNE2-209ENST00000553308 GNG8Q9UK08 70 aa7.08□□□□□ -1.28
SYNE2-209ENST00000553308 SIRT4Q9Y6E7 314 aaPredicted RBP7.08□□□□□ -1.28
SYNE2-209ENST00000553308 BIRC6Q9NR09 4857 aa7.07□□□□□ -1.28
SYNE2-209ENST00000553308 AQP12BA6NM10 295 aa7.07□□□□□ -1.28
SYNE2-209ENST00000553308 ZAR1LA6NP61 321 aa7.07□□□□□ -1.28
SYNE2-209ENST00000553308 NPIPB11E5RHQ5 1161 aa7.07□□□□□ -1.28
SYNE2-209ENST00000553308 RRP9O43818 475 aaKnown RBP7.07□□□□□ -1.28
SYNE2-209ENST00000553308 MPZL2O60487 215 aa7.07□□□□□ -1.28
SYNE2-209ENST00000553308 FKBP6O75344 327 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms