RNA–Protein interactions for RNA: ENST00000553287.5

ATXN3-217, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-217ENST00000553287 SLC35A3Q9Y2D2 325 aa2.88□□□□□ -1.95
ATXN3-217ENST00000553287 STK38LQ9Y2H1 464 aa2.88□□□□□ -1.95
ATXN3-217ENST00000553287 HECTD4Q9Y4D8 3996 aa2.88□□□□□ -1.95
ATXN3-217ENST00000553287 HUWE1Q7Z6Z7 4374 aaKnown RBP2.87□□□□□ -1.95
ATXN3-217ENST00000553287 A0A1B0GW55 424 aa2.87□□□□□ -1.95
ATXN3-217ENST00000553287 C5orf49A4QMS7 147 aa2.87□□□□□ -1.95
ATXN3-217ENST00000553287 CHST1O43916 411 aa2.87□□□□□ -1.95
ATXN3-217ENST00000553287 TIMM8AO60220 97 aaPredicted RBP2.87□□□□□ -1.95
ATXN3-217ENST00000553287 OR10H3O60404 316 aa2.87□□□□□ -1.95
ATXN3-217ENST00000553287 TBX19O60806 448 aa2.87□□□□□ -1.95
ATXN3-217ENST00000553287 NPIPB7O75200 414 aa2.87□□□□□ -1.95
ATXN3-217ENST00000553287 MFN2O95140 757 aa2.87□□□□□ -1.95
ATXN3-217ENST00000553287 UBL3O95164 117 aa2.87□□□□□ -1.95
ATXN3-217ENST00000553287 AHSA1O95433 338 aa2.87□□□□□ -1.95
ATXN3-217ENST00000553287 TFF1P04155 84 aa2.87□□□□□ -1.95
ATXN3-217ENST00000553287 IFI6P09912 130 aa2.87□□□□□ -1.95
ATXN3-217ENST00000553287 DUX4L2P0CJ85 424 aa2.87□□□□□ -1.95
ATXN3-217ENST00000553287 DUX4L3P0CJ86 424 aa2.87□□□□□ -1.95
ATXN3-217ENST00000553287 DUX4L5P0CJ88 424 aa2.87□□□□□ -1.95
ATXN3-217ENST00000553287 DUX4L6P0CJ89 424 aa2.87□□□□□ -1.95
ATXN3-217ENST00000553287 DUX4L7P0CJ90 424 aa2.87□□□□□ -1.95
ATXN3-217ENST00000553287 NQO1P15559 274 aaKnown RBP2.87□□□□□ -1.95
ATXN3-217ENST00000553287 TAC1P20366 129 aa2.87□□□□□ -1.95
ATXN3-217ENST00000553287 AHCYP23526 432 aa2.87□□□□□ -1.95
ATXN3-217ENST00000553287 GTF2E2P29084 291 aaKnown RBP2.87□□□□□ -1.95
ATXN3-217ENST00000553287 HPCAL1P37235 193 aa2.87□□□□□ -1.95
ATXN3-217ENST00000553287 PMELP40967 661 aa2.87□□□□□ -1.95
ATXN3-217ENST00000553287 HTR5AP47898 357 aa2.87□□□□□ -1.95
ATXN3-217ENST00000553287 PKNOX1P55347 436 aa2.87□□□□□ -1.95
ATXN3-217ENST00000553287 BIDP55957 195 aa2.87□□□□□ -1.95
ATXN3-217ENST00000553287 ERVK-25P63136 954 aa2.87□□□□□ -1.95
ATXN3-217ENST00000553287 LRRC36Q1X8D7 754 aa2.87□□□□□ -1.95
ATXN3-217ENST00000553287 TBC1D28Q2M2D7 210 aa2.87□□□□□ -1.95
ATXN3-217ENST00000553287 TMEM155Q4W5P6 130 aa2.87□□□□□ -1.95
ATXN3-217ENST00000553287 CYBRD1Q53TN4 286 aa2.87□□□□□ -1.95
ATXN3-217ENST00000553287 PABPC1L2AQ5JQF8 200 aa2.87□□□□□ -1.95
ATXN3-217ENST00000553287 C1orf94Q6P1W5 598 aa2.87□□□□□ -1.95
ATXN3-217ENST00000553287 DUX4L9Q6RFH8 374 aaPredicted RBP2.87□□□□□ -1.95
ATXN3-217ENST00000553287 CYS1Q717R9 158 aa2.87□□□□□ -1.95
ATXN3-217ENST00000553287 NET1Q7Z628 596 aaPredicted RBP2.87□□□□□ -1.95
ATXN3-217ENST00000553287 COMTD1Q86VU5 262 aa2.87□□□□□ -1.95
ATXN3-217ENST00000553287 C10orf111Q8N326 155 aa2.87□□□□□ -1.95
ATXN3-217ENST00000553287 TMEM86BQ8N661 226 aa2.87□□□□□ -1.95
ATXN3-217ENST00000553287 ZNF283Q8N7M2 679 aa2.87□□□□□ -1.95
ATXN3-217ENST00000553287 OR4S1Q8NGB4 309 aa2.87□□□□□ -1.95
ATXN3-217ENST00000553287 OR4A15Q8NGL6 344 aa2.87□□□□□ -1.95
ATXN3-217ENST00000553287 DCAKDQ8WVC6 231 aa2.87□□□□□ -1.95
ATXN3-217ENST00000553287 TMEM80Q96HE8 168 aa2.87□□□□□ -1.95
ATXN3-217ENST00000553287 FCRL1Q96LA6 429 aa2.87□□□□□ -1.95
ATXN3-217ENST00000553287 TEX37Q96LM6 180 aa2.87□□□□□ -1.95
ATXN3-217ENST00000553287 OXGR1Q96P68 337 aa2.87□□□□□ -1.95
ATXN3-217ENST00000553287 ZNF317Q96PQ6 595 aaPredicted RBP2.87□□□□□ -1.95
ATXN3-217ENST00000553287 OR2V2Q96R30 315 aa2.87□□□□□ -1.95
ATXN3-217ENST00000553287 CCT7Q99832 543 aa2.87□□□□□ -1.95
ATXN3-217ENST00000553287 ERP44Q9BS26 406 aa2.87□□□□□ -1.95
ATXN3-217ENST00000553287 SLC38A1Q9H2H9 487 aa2.87□□□□□ -1.95
ATXN3-217ENST00000553287 FN3KRPQ9HA64 309 aa2.87□□□□□ -1.95
ATXN3-217ENST00000553287 MEAF6Q9HAF1 191 aa2.87□□□□□ -1.95
ATXN3-217ENST00000553287 RRAGDQ9NQL2 400 aaPredicted RBP2.87□□□□□ -1.95
ATXN3-217ENST00000553287 SIRT7Q9NRC8 400 aa2.87□□□□□ -1.95
ATXN3-217ENST00000553287 NINJ2Q9NZG7 142 aa2.87□□□□□ -1.95
ATXN3-217ENST00000553287 DUX4Q9UBX2 424 aa2.87□□□□□ -1.95
ATXN3-217ENST00000553287 CLN8Q9UBY8 286 aa2.87□□□□□ -1.95
ATXN3-217ENST00000553287 ATP6V1HQ9UI12 483 aa2.87□□□□□ -1.95
ATXN3-217ENST00000553287 RPUSD1Q9UJJ7 312 aaKnown RBP2.87□□□□□ -1.95
ATXN3-217ENST00000553287 VPREB3Q9UKI3 123 aa2.87□□□□□ -1.95
ATXN3-217ENST00000553287 TMCC3Q9ULS5 477 aa2.87□□□□□ -1.95
ATXN3-217ENST00000553287 TMCO1Q9UM00 188 aa2.87□□□□□ -1.95
ATXN3-217ENST00000553287 USH1CQ9Y6N9 552 aa2.87□□□□□ -1.95
ATXN3-217ENST00000553287 KIAA1109Q2LD37 5005 aa2.87□□□□□ -1.95
ATXN3-217ENST00000553287 IGKV1D-42A0A075B6H8 117 aa2.86□□□□□ -1.95
ATXN3-217ENST00000553287 IGHV3OR15-7A0A075B7D8 119 aa2.86□□□□□ -1.95
ATXN3-217ENST00000553287 IGKV1D-43A0A0B4J1Z2 117 aa2.86□□□□□ -1.95
ATXN3-217ENST00000553287 ZNF726A6NNF4 738 aa2.86□□□□□ -1.95
ATXN3-217ENST00000553287 ZNF879B4DU55 563 aa2.86□□□□□ -1.95
ATXN3-217ENST00000553287 F5H5P2 479 aa2.86□□□□□ -1.95
ATXN3-217ENST00000553287 H3BUX3 64 aa2.86□□□□□ -1.95
ATXN3-217ENST00000553287 HMGN4O00479 90 aa2.86□□□□□ -1.95
ATXN3-217ENST00000553287 EIF3HO15372 352 aaKnown RBP eCLIP2.86□□□□□ -1.95
ATXN3-217ENST00000553287 VAMP5O95183 116 aa2.86□□□□□ -1.95
ATXN3-217ENST00000553287 HLA-DPB1P04440 258 aa2.86□□□□□ -1.95
ATXN3-217ENST00000553287 KRT16P08779 473 aa2.86□□□□□ -1.95
ATXN3-217ENST00000553287 MMP7P09237 267 aaPredicted RBP2.86□□□□□ -1.95
ATXN3-217ENST00000553287 PPIAL4GP0DN37 164 aa2.86□□□□□ -1.95
ATXN3-217ENST00000553287 VDAC1P21796 283 aa2.86□□□□□ -1.95
ATXN3-217ENST00000553287 UQCRC2P22695 453 aa2.86□□□□□ -1.95
ATXN3-217ENST00000553287 STOMP27105 288 aa2.86□□□□□ -1.95
ATXN3-217ENST00000553287 GCAP28676 217 aa2.86□□□□□ -1.95
ATXN3-217ENST00000553287 APLNRP35414 380 aa2.86□□□□□ -1.95
ATXN3-217ENST00000553287 ANP32AP39687 249 aaKnown RBP2.86□□□□□ -1.95
ATXN3-217ENST00000553287 CDKN2CP42773 168 aa2.86□□□□□ -1.95
ATXN3-217ENST00000553287 CSNK1A1P48729 337 aa2.86□□□□□ -1.95
ATXN3-217ENST00000553287 RAB13P51153 203 aa2.86□□□□□ -1.95
ATXN3-217ENST00000553287 PPP1CBP62140 327 aa2.86□□□□□ -1.95
ATXN3-217ENST00000553287 HSF2Q03933 536 aa2.86□□□□□ -1.95
ATXN3-217ENST00000553287 NAB1Q13506 487 aa2.86□□□□□ -1.95
ATXN3-217ENST00000553287 XKR7Q5GH72 579 aa2.86□□□□□ -1.95
ATXN3-217ENST00000553287 ATAD3BQ5T9A4 648 aa2.86□□□□□ -1.95
ATXN3-217ENST00000553287 IL23RQ5VWK5 629 aa2.86□□□□□ -1.95
ATXN3-217ENST00000553287 PRAMEF6Q5VXH4 476 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms