RNA–Protein interactions for RNA: ENST00000553278.1

SCFD1-208, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 795 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-208ENST00000553278 TAF6P49848 677 aa3.76□□□□□ -1.81
SCFD1-208ENST00000553278 SMAGPQ0VAQ4 97 aa3.76□□□□□ -1.81
SCFD1-208ENST00000553278 STX5Q13190 355 aa3.76□□□□□ -1.81
SCFD1-208ENST00000553278 BCL2A1Q16548 175 aa3.76□□□□□ -1.81
SCFD1-208ENST00000553278 LRRC26Q2I0M4 334 aa3.76□□□□□ -1.81
SCFD1-208ENST00000553278 LUZP6Q538Z0 58 aa3.76□□□□□ -1.81
SCFD1-208ENST00000553278 C2orf83Q53S99 150 aa3.76□□□□□ -1.81
SCFD1-208ENST00000553278 ZNF684Q5T5D7 378 aa3.76□□□□□ -1.81
SCFD1-208ENST00000553278 MORN3Q6PF18 240 aaPredicted RBP3.76□□□□□ -1.81
SCFD1-208ENST00000553278 C17orf50Q8WW18 174 aa3.76□□□□□ -1.81
SCFD1-208ENST00000553278 CYGBQ8WWM9 190 aa3.76□□□□□ -1.81
SCFD1-208ENST00000553278 SRSF12Q8WXF0 261 aaKnown RBP3.76□□□□□ -1.81
SCFD1-208ENST00000553278 ESR2Q92731 530 aa3.76□□□□□ -1.81
SCFD1-208ENST00000553278 PPCDCQ96CD2 204 aa3.76□□□□□ -1.81
SCFD1-208ENST00000553278 FXYD5Q96DB9 178 aa3.76□□□□□ -1.81
SCFD1-208ENST00000553278 OLFM3Q96PB7 478 aa3.76□□□□□ -1.81
SCFD1-208ENST00000553278 RNF157Q96PX1 679 aa3.76□□□□□ -1.81
SCFD1-208ENST00000553278 DERL3Q96Q80 235 aa3.76□□□□□ -1.81
SCFD1-208ENST00000553278 CCDC94Q9BW85 323 aaPredicted RBP3.76□□□□□ -1.81
SCFD1-208ENST00000553278 ULBP1Q9BZM6 244 aa3.76□□□□□ -1.81
SCFD1-208ENST00000553278 MS4A6AQ9H2W1 248 aa3.76□□□□□ -1.81
SCFD1-208ENST00000553278 POMPQ9Y244 141 aa3.76□□□□□ -1.81
SCFD1-208ENST00000553278 C9orf84Q5VXU9 1444 aa3.76□□□□□ -1.81
SCFD1-208ENST00000553278 CDC42BPBQ9Y5S2 1711 aa3.75□□□□□ -1.81
SCFD1-208ENST00000553278 ZNF646O15015 1829 aaPredicted RBP3.75□□□□□ -1.81
SCFD1-208ENST00000553278 IGKV1-6A0A0C4DH72 117 aa3.75□□□□□ -1.81
SCFD1-208ENST00000553278 MAGEB4O15481 346 aaPredicted RBP3.75□□□□□ -1.81
SCFD1-208ENST00000553278 TGOLN2O43493 480 aa3.75□□□□□ -1.81
SCFD1-208ENST00000553278 TCF21O43680 179 aa3.75□□□□□ -1.81
SCFD1-208ENST00000553278 IGKV1-39P01597 117 aa3.75□□□□□ -1.81
SCFD1-208ENST00000553278 IGKV1D-39P04432 117 aa3.75□□□□□ -1.81
SCFD1-208ENST00000553278 ISG15P05161 165 aa3.75□□□□□ -1.81
SCFD1-208ENST00000553278 CALB1P05937 261 aa3.75□□□□□ -1.81
SCFD1-208ENST00000553278 SEC11BP0C7V7 166 aa3.75□□□□□ -1.81
SCFD1-208ENST00000553278 MDKP21741 143 aaPredicted RBP3.75□□□□□ -1.81
SCFD1-208ENST00000553278 AGTR1P30556 359 aa3.75□□□□□ -1.81
SCFD1-208ENST00000553278 HSPA13P48723 471 aa3.75□□□□□ -1.81
SCFD1-208ENST00000553278 NUDT2P50583 147 aa3.75□□□□□ -1.81
SCFD1-208ENST00000553278 SPIN4Q56A73 249 aa3.75□□□□□ -1.81
SCFD1-208ENST00000553278 CST9Q5W186 159 aa3.75□□□□□ -1.81
SCFD1-208ENST00000553278 LRRN1Q6UXK5 716 aa3.75□□□□□ -1.81
SCFD1-208ENST00000553278 SHISA6Q6ZSJ9 500 aa3.75□□□□□ -1.81
SCFD1-208ENST00000553278 CLEC20AQ6ZU45 233 aa3.75□□□□□ -1.81
SCFD1-208ENST00000553278 OR10G2Q8NGC3 310 aa3.75□□□□□ -1.81
SCFD1-208ENST00000553278 TESCQ96BS2 214 aa3.75□□□□□ -1.81
SCFD1-208ENST00000553278 PRSS27Q9BQR3 290 aa3.75□□□□□ -1.81
SCFD1-208ENST00000553278 MARVELD1Q9BSK0 173 aa3.75□□□□□ -1.81
SCFD1-208ENST00000553278 CDCA4Q9BXL8 241 aa3.75□□□□□ -1.81
SCFD1-208ENST00000553278 ZNF436Q9C0F3 470 aaPredicted RBP3.75□□□□□ -1.81
SCFD1-208ENST00000553278 DERL2Q9GZP9 239 aa3.75□□□□□ -1.81
SCFD1-208ENST00000553278 SND1-IT1Q9HBX3 110 aa3.75□□□□□ -1.81
SCFD1-208ENST00000553278 GUCA1BQ9UMX6 200 aa3.75□□□□□ -1.81
SCFD1-208ENST00000553278 ZNF706Q9Y5V0 76 aaPredicted RBP3.75□□□□□ -1.81
SCFD1-208ENST00000553278 SMAD5-AS1Q9Y6J3 95 aa3.75□□□□□ -1.81
SCFD1-208ENST00000553278 IGHV1-3A0A0C4DH29 117 aa3.74□□□□□ -1.81
SCFD1-208ENST00000553278 C21orf140B9A014 251 aa3.74□□□□□ -1.81
SCFD1-208ENST00000553278 CCNE2O96020 404 aa3.74□□□□□ -1.81
SCFD1-208ENST00000553278 MPIP34949 423 aa3.74□□□□□ -1.81
SCFD1-208ENST00000553278 CMC4P56277 68 aaPredicted RBP3.74□□□□□ -1.81
SCFD1-208ENST00000553278 BTN1A1Q13410 526 aa3.74□□□□□ -1.81
SCFD1-208ENST00000553278 Q6ZR03 302 aa3.74□□□□□ -1.81
SCFD1-208ENST00000553278 ZIC4Q8N9L1 334 aa3.74□□□□□ -1.81
SCFD1-208ENST00000553278 CLDN23Q96B33 292 aa3.74□□□□□ -1.81
SCFD1-208ENST00000553278 L3HYPDHQ96EM0 354 aa3.74□□□□□ -1.81
SCFD1-208ENST00000553278 FOPNLQ96NB1 174 aa3.74□□□□□ -1.81
SCFD1-208ENST00000553278 THTPAQ9BU02 230 aa3.74□□□□□ -1.81
SCFD1-208ENST00000553278 TRIM45Q9H8W5 580 aaPredicted RBP3.74□□□□□ -1.81
SCFD1-208ENST00000553278 MYO15BQ96JP2 1530 aa3.74□□□□□ -1.81
SCFD1-208ENST00000553278 NUP214P35658 2090 aaPredicted RBP3.74□□□□□ -1.81
SCFD1-208ENST00000553278 AHDC1Q5TGY3 1603 aaPredicted RBP3.73□□□□□ -1.81
SCFD1-208ENST00000553278 NOS1P29475 1434 aa3.73□□□□□ -1.81
SCFD1-208ENST00000553278 TNS2Q63HR2 1409 aa3.73□□□□□ -1.81
SCFD1-208ENST00000553278 CXorf1O96002 111 aa3.73□□□□□ -1.81
SCFD1-208ENST00000553278 SLC6A1P30531 599 aa3.73□□□□□ -1.81
SCFD1-208ENST00000553278 BASP1P80723 227 aaKnown RBP3.73□□□□□ -1.81
SCFD1-208ENST00000553278 SKP2Q13309 424 aa3.73□□□□□ -1.81
SCFD1-208ENST00000553278 C1DQ13901 141 aaKnown RBP3.73□□□□□ -1.81
SCFD1-208ENST00000553278 Q5W150 140 aa3.73□□□□□ -1.81
SCFD1-208ENST00000553278 TNFAIP8L2Q6P589 184 aaPredicted RBP3.73□□□□□ -1.81
SCFD1-208ENST00000553278 CD200R1LQ6Q8B3 271 aa3.73□□□□□ -1.81
SCFD1-208ENST00000553278 UBALD2Q8IYN6 164 aa3.73□□□□□ -1.81
SCFD1-208ENST00000553278 STK40Q8N2I9 435 aa3.73□□□□□ -1.81
SCFD1-208ENST00000553278 OR8A1Q8NGG7 326 aa3.73□□□□□ -1.81
SCFD1-208ENST00000553278 ASB13Q8WXK3 278 aa3.73□□□□□ -1.81
SCFD1-208ENST00000553278 RAB8BQ92930 207 aa3.73□□□□□ -1.81
SCFD1-208ENST00000553278 TAMM41Q96BW9 452 aa3.73□□□□□ -1.81
SCFD1-208ENST00000553278 GPR82Q96P67 336 aa3.73□□□□□ -1.81
SCFD1-208ENST00000553278 OR51V1Q9H2C8 321 aa3.73□□□□□ -1.81
SCFD1-208ENST00000553278 MAP1LC3AQ9H492 121 aa3.73□□□□□ -1.81
SCFD1-208ENST00000553278 ZNF430Q9H8G1 570 aaPredicted RBP3.73□□□□□ -1.81
SCFD1-208ENST00000553278 TAS2R9Q9NYW1 312 aa3.73□□□□□ -1.81
SCFD1-208ENST00000553278 EMC3Q9P0I2 261 aa3.73□□□□□ -1.81
SCFD1-208ENST00000553278 ACOX3O15254 700 aa3.72□□□□□ -1.81
SCFD1-208ENST00000553278 ARL6IP5O75915 188 aa3.72□□□□□ -1.81
SCFD1-208ENST00000553278 LINC00614P0C842 121 aa3.72□□□□□ -1.81
SCFD1-208ENST00000553278 S100A5P33763 92 aa3.72□□□□□ -1.81
SCFD1-208ENST00000553278 ZNF83P51522 516 aa3.72□□□□□ -1.81
SCFD1-208ENST00000553278 RAP1GDS1P52306 607 aa3.72□□□□□ -1.81
SCFD1-208ENST00000553278 MP68P56378 58 aa3.72□□□□□ -1.81
SCFD1-208ENST00000553278 TMEM241Q24JQ0 296 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms