RNA–Protein interactions for RNA: ENST00000552440.5

USP44-208, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 5 BASIC

Gene USP44, Length 1,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-208ENST00000552440 CXCL3P19876 107 aa3.27□□□□□ -1.89
USP44-208ENST00000552440 IGHV1-2P23083 117 aa3.27□□□□□ -1.89
USP44-208ENST00000552440 AKR1C3P42330 323 aa3.27□□□□□ -1.89
USP44-208ENST00000552440 RIPPLY3P57055 190 aa3.27□□□□□ -1.89
USP44-208ENST00000552440 RHOBP62745 196 aa3.27□□□□□ -1.89
USP44-208ENST00000552440 ZNF763Q0D2J5 394 aa3.27□□□□□ -1.89
USP44-208ENST00000552440 WHAMMP3Q1A5X7 153 aa3.27□□□□□ -1.89
USP44-208ENST00000552440 C17orf58Q2M2W7 97 aa3.27□□□□□ -1.89
USP44-208ENST00000552440 SMIM21Q3B7S5 101 aa3.27□□□□□ -1.89
USP44-208ENST00000552440 ZNF718Q3SXZ3 478 aa3.27□□□□□ -1.89
USP44-208ENST00000552440 TMEM128Q5BJH2 165 aa3.27□□□□□ -1.89
USP44-208ENST00000552440 FAM162BQ5T6X4 162 aa3.27□□□□□ -1.89
USP44-208ENST00000552440 LCE1EQ5T753 118 aa3.27□□□□□ -1.89
USP44-208ENST00000552440 PAMR1Q6UXH9 720 aa3.27□□□□□ -1.89
USP44-208ENST00000552440 ZNF620Q6ZNG0 422 aa3.27□□□□□ -1.89
USP44-208ENST00000552440 DGAT2L6Q6ZPD8 337 aa3.27□□□□□ -1.89
USP44-208ENST00000552440 SLC16A13Q7RTY0 426 aa3.27□□□□□ -1.89
USP44-208ENST00000552440 TRPT1Q86TN4 253 aaKnown RBP3.27□□□□□ -1.89
USP44-208ENST00000552440 C17orf82Q86X59 251 aaPredicted RBP3.27□□□□□ -1.89
USP44-208ENST00000552440 SLC35F6Q8N357 371 aa3.27□□□□□ -1.89
USP44-208ENST00000552440 MUC15Q8N387 334 aa3.27□□□□□ -1.89
USP44-208ENST00000552440 FAM71E2Q8N5Q1 922 aa3.27□□□□□ -1.89
USP44-208ENST00000552440 METTL27Q8N6F8 245 aaPredicted RBP3.27□□□□□ -1.89
USP44-208ENST00000552440 ST6GALNAC3Q8NDV1 305 aa3.27□□□□□ -1.89
USP44-208ENST00000552440 OR10AD1Q8NGE0 317 aa3.27□□□□□ -1.89
USP44-208ENST00000552440 LHFPL5Q8TAF8 219 aa3.27□□□□□ -1.89
USP44-208ENST00000552440 LRRC29Q8WV35 223 aa3.27□□□□□ -1.89
USP44-208ENST00000552440 RGP1Q92546 391 aaPredicted RBP3.27□□□□□ -1.89
USP44-208ENST00000552440 FMC1Q96HJ9 113 aa3.27□□□□□ -1.89
USP44-208ENST00000552440 OR2M4Q96R27 311 aa3.27□□□□□ -1.89
USP44-208ENST00000552440 METTL26Q96S19 204 aa3.27□□□□□ -1.89
USP44-208ENST00000552440 MS4A8Q9BY19 250 aa3.27□□□□□ -1.89
USP44-208ENST00000552440 PANK3Q9H999 370 aa3.27□□□□□ -1.89
USP44-208ENST00000552440 LRTM1Q9HBL6 345 aa3.27□□□□□ -1.89
USP44-208ENST00000552440 ZNF71Q9NQZ8 489 aaPredicted RBP3.27□□□□□ -1.89
USP44-208ENST00000552440 RALGAPA1Q6GYQ0 2036 aa3.27□□□□□ -1.89
USP44-208ENST00000552440 RLFQ13129 1914 aa3.27□□□□□ -1.89
USP44-208ENST00000552440 TET3O43151 1660 aa3.27□□□□□ -1.89
USP44-208ENST00000552440 UNC13BO14795 1591 aa3.26□□□□□ -1.89
USP44-208ENST00000552440 IGHV4-4A0A075B6R2 117 aa3.26□□□□□ -1.89
USP44-208ENST00000552440 TRAV8-2A0A0B4J237 113 aa3.26□□□□□ -1.89
USP44-208ENST00000552440 TRAV8-6A0A0B4J262 113 aa3.26□□□□□ -1.89
USP44-208ENST00000552440 TEX50A0A1B0GTY4 177 aa3.26□□□□□ -1.89
USP44-208ENST00000552440 A0A1B0GXF2 115 aa3.26□□□□□ -1.89
USP44-208ENST00000552440 H0Y9J4 135 aa3.26□□□□□ -1.89
USP44-208ENST00000552440 EIF1BO60739 113 aaKnown RBP3.26□□□□□ -1.89
USP44-208ENST00000552440 TTRP02766 147 aa3.26□□□□□ -1.89
USP44-208ENST00000552440 ERGP11308 486 aa3.26□□□□□ -1.89
USP44-208ENST00000552440 IGLL1P15814 213 aa3.26□□□□□ -1.89
USP44-208ENST00000552440 SPNP16150 400 aa3.26□□□□□ -1.89
USP44-208ENST00000552440 ERP29P30040 261 aaKnown RBP3.26□□□□□ -1.89
USP44-208ENST00000552440 AGTR1P30556 359 aa3.26□□□□□ -1.89
USP44-208ENST00000552440 BTCP35070 178 aa3.26□□□□□ -1.89
USP44-208ENST00000552440 EIF1P41567 113 aaKnown RBP3.26□□□□□ -1.89
USP44-208ENST00000552440 VDAC2P45880 294 aaPredicted RBP3.26□□□□□ -1.89
USP44-208ENST00000552440 ZNF133P52736 654 aaPredicted RBP3.26□□□□□ -1.89
USP44-208ENST00000552440 SELENOTP62341 195 aa3.26□□□□□ -1.89
USP44-208ENST00000552440 DYNLL1P63167 89 aaKnown RBP3.26□□□□□ -1.89
USP44-208ENST00000552440 SRPXP78539 464 aa3.26□□□□□ -1.89
USP44-208ENST00000552440 RUNX1Q01196 453 aa3.26□□□□□ -1.89
USP44-208ENST00000552440 TMEM78Q5T7P6 136 aa3.26□□□□□ -1.89
USP44-208ENST00000552440 RSBN1Q5VWQ0 802 aaPredicted RBP3.26□□□□□ -1.89
USP44-208ENST00000552440 ELP2Q6IA86 826 aa3.26□□□□□ -1.89
USP44-208ENST00000552440 ANGPTL5Q86XS5 388 aa3.26□□□□□ -1.89
USP44-208ENST00000552440 ZNF567Q8N184 647 aa3.26□□□□□ -1.89
USP44-208ENST00000552440 C11orf72Q8NBR9 251 aa3.26□□□□□ -1.89
USP44-208ENST00000552440 ZNF439Q8NDP4 499 aa3.26□□□□□ -1.89
USP44-208ENST00000552440 OR2K2Q8NGT1 345 aa3.26□□□□□ -1.89
USP44-208ENST00000552440 BORCS7Q96B45 105 aa3.26□□□□□ -1.89
USP44-208ENST00000552440 RNF185Q96GF1 192 aa3.26□□□□□ -1.89
USP44-208ENST00000552440 GMPPAQ96IJ6 420 aaPredicted RBP3.26□□□□□ -1.89
USP44-208ENST00000552440 ANKRD36BP1Q96IX9 119 aa3.26□□□□□ -1.89
USP44-208ENST00000552440 PLEKHF1Q96S99 279 aa3.26□□□□□ -1.89
USP44-208ENST00000552440 C2orf88Q9BSF0 95 aa3.26□□□□□ -1.89
USP44-208ENST00000552440 CHST5Q9GZS9 411 aa3.26□□□□□ -1.89
USP44-208ENST00000552440 POMKQ9H5K3 350 aa3.26□□□□□ -1.89
USP44-208ENST00000552440 DDX31Q9H8H2 851 aaKnown RBP3.26□□□□□ -1.89
USP44-208ENST00000552440 GNB4Q9HAV0 340 aa3.26□□□□□ -1.89
USP44-208ENST00000552440 RRAGDQ9NQL2 400 aaPredicted RBP3.26□□□□□ -1.89
USP44-208ENST00000552440 RASL12Q9NYN1 266 aa3.26□□□□□ -1.89
USP44-208ENST00000552440 SS18L2Q9UHA2 77 aa3.26□□□□□ -1.89
USP44-208ENST00000552440 MROH1Q8NDA8 1641 aa3.26□□□□□ -1.89
USP44-208ENST00000552440 CCNB3Q8WWL7 1395 aa3.26□□□□□ -1.89
USP44-208ENST00000552440 DISP2A7MBM2 1401 aa3.26□□□□□ -1.89
USP44-208ENST00000552440 PIK3C2GO75747 1445 aa3.26□□□□□ -1.89
USP44-208ENST00000552440 SAA2-SAA4A0A096LPE2 208 aa3.26□□□□□ -1.89
USP44-208ENST00000552440 K7EP13 123 aa3.26□□□□□ -1.89
USP44-208ENST00000552440 EDIL3O43854 480 aa3.26□□□□□ -1.89
USP44-208ENST00000552440 SULT1C4O75897 302 aa3.26□□□□□ -1.89
USP44-208ENST00000552440 OR2J2O76002 312 aa3.26□□□□□ -1.89
USP44-208ENST00000552440 YIF1AO95070 293 aa3.26□□□□□ -1.89
USP44-208ENST00000552440 CXCL2P19875 107 aa3.26□□□□□ -1.89
USP44-208ENST00000552440 OGNP20774 298 aaKnown RBP3.26□□□□□ -1.89
USP44-208ENST00000552440 GABRR1P24046 479 aa3.26□□□□□ -1.89
USP44-208ENST00000552440 DRD3P35462 400 aa3.26□□□□□ -1.89
USP44-208ENST00000552440 NDUFA8P51970 172 aa3.26□□□□□ -1.89
USP44-208ENST00000552440 HSPE1P61604 102 aaKnown RBP3.26□□□□□ -1.89
USP44-208ENST00000552440 RPS23P62266 143 aaKnown RBP3.26□□□□□ -1.89
USP44-208ENST00000552440 GTF2BQ00403 316 aa3.26□□□□□ -1.89
USP44-208ENST00000552440 SLC10A1Q14973 349 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms