RNA–Protein interactions for RNA: ENST00000552341.5

PFDN5-216, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 1,980 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-216ENST00000552341 TMEM17Q86X19 198 aa9.19□□□□□ -0.94
PFDN5-216ENST00000552341 C12orf45Q8N5I9 185 aaPredicted RBP9.19□□□□□ -0.94
PFDN5-216ENST00000552341 SUMF2Q8NBJ7 301 aa9.19□□□□□ -0.94
PFDN5-216ENST00000552341 GTF3AQ92664 365 aaKnown RBP9.19□□□□□ -0.94
PFDN5-216ENST00000552341 USB1Q9BQ65 265 aaKnown RBP9.19□□□□□ -0.94
PFDN5-216ENST00000552341 CXXC4Q9H2H0 198 aa9.19□□□□□ -0.94
PFDN5-216ENST00000552341 PRORYQ9H606 182 aa9.19□□□□□ -0.94
PFDN5-216ENST00000552341 MEMO1Q9Y316 297 aa9.19□□□□□ -0.94
PFDN5-216ENST00000552341 SESN1Q9Y6P5 492 aa9.19□□□□□ -0.94
PFDN5-216ENST00000552341 CHD3Q12873 2000 aaKnown RBP9.18□□□□□ -0.94
PFDN5-216ENST00000552341 MFSD2BA6NFX1 497 aa9.18□□□□□ -0.94
PFDN5-216ENST00000552341 PTBP3O95758 552 aaKnown RBP9.18□□□□□ -0.94
PFDN5-216ENST00000552341 GLAP06280 429 aa9.18□□□□□ -0.94
PFDN5-216ENST00000552341 OR5H8P0DN80 308 aa9.18□□□□□ -0.94
PFDN5-216ENST00000552341 CD40P25942 277 aa9.18□□□□□ -0.94
PFDN5-216ENST00000552341 ZNF81P51508 661 aa9.18□□□□□ -0.94
PFDN5-216ENST00000552341 SUPT4H1P63272 117 aaKnown RBP9.18□□□□□ -0.94
PFDN5-216ENST00000552341 ZNF146Q15072 292 aa9.18□□□□□ -0.94
PFDN5-216ENST00000552341 SURF2Q15527 256 aaPredicted RBP9.18□□□□□ -0.94
PFDN5-216ENST00000552341 C20orf204Q6ZNR8 217 aa9.18□□□□□ -0.94
PFDN5-216ENST00000552341 ZNF826PQ6ZT77 177 aa9.18□□□□□ -0.94
PFDN5-216ENST00000552341 LINC00518Q8N0U6 118 aa9.18□□□□□ -0.94
PFDN5-216ENST00000552341 KDF1Q8NAX2 398 aaPredicted RBP9.18□□□□□ -0.94
PFDN5-216ENST00000552341 POC1AQ8NBT0 407 aa9.18□□□□□ -0.94
PFDN5-216ENST00000552341 MITD1Q8WV92 249 aa9.18□□□□□ -0.94
PFDN5-216ENST00000552341 WDR13Q9H1Z4 485 aa9.18□□□□□ -0.94
PFDN5-216ENST00000552341 SPACA1Q9HBV2 294 aa9.18□□□□□ -0.94
PFDN5-216ENST00000552341 Q9N2K0 584 aa9.18□□□□□ -0.94
PFDN5-216ENST00000552341 NECAP2Q9NVZ3 263 aa9.18□□□□□ -0.94
PFDN5-216ENST00000552341 OPN4Q9UHM6 478 aa9.18□□□□□ -0.94
PFDN5-216ENST00000552341 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.17□□□□□ -0.94
PFDN5-216ENST00000552341 MCRIP1C9JLW8 97 aa9.17□□□□□ -0.94
PFDN5-216ENST00000552341 M0R233 179 aa9.17□□□□□ -0.94
PFDN5-216ENST00000552341 SIX6O95475 246 aa9.17□□□□□ -0.94
PFDN5-216ENST00000552341 RPS2P15880 293 aaKnown RBP9.17□□□□□ -0.94
PFDN5-216ENST00000552341 PPP3CBP16298 524 aa9.17□□□□□ -0.94
PFDN5-216ENST00000552341 PI3P19957 117 aa9.17□□□□□ -0.94
PFDN5-216ENST00000552341 NUP62P37198 522 aaPredicted RBP9.17□□□□□ -0.94
PFDN5-216ENST00000552341 IL13RA1P78552 427 aa9.17□□□□□ -0.94
PFDN5-216ENST00000552341 HOXA4Q00056 320 aaPredicted RBP9.17□□□□□ -0.94
PFDN5-216ENST00000552341 TMEM128Q5BJH2 165 aa9.17□□□□□ -0.94
PFDN5-216ENST00000552341 PRAMEF6Q5VXH4 476 aa9.17□□□□□ -0.94
PFDN5-216ENST00000552341 SLC22A25Q6T423 547 aa9.17□□□□□ -0.94
PFDN5-216ENST00000552341 WDR82Q6UXN9 313 aa9.17□□□□□ -0.94
PFDN5-216ENST00000552341 C5orf24Q7Z6I8 188 aa9.17□□□□□ -0.94
PFDN5-216ENST00000552341 ST6GALNAC3Q8NDV1 305 aa9.17□□□□□ -0.94
PFDN5-216ENST00000552341 OR2T35Q8NGX2 323 aa9.17□□□□□ -0.94
PFDN5-216ENST00000552341 ZCCHC14Q8WYQ9 949 aaKnown RBP9.17□□□□□ -0.94
PFDN5-216ENST00000552341 RND1Q92730 232 aa9.17□□□□□ -0.94
PFDN5-216ENST00000552341 ZNF2Q9BSG1 426 aaPredicted RBP9.17□□□□□ -0.94
PFDN5-216ENST00000552341 CHIAQ9BZP6 476 aa9.17□□□□□ -0.94
PFDN5-216ENST00000552341 ZNF286AQ9HBT8 521 aa9.17□□□□□ -0.94
PFDN5-216ENST00000552341 KLF2Q9Y5W3 355 aaPredicted RBP9.17□□□□□ -0.94
PFDN5-216ENST00000552341 SPTA1P02549 2419 aa9.17□□□□□ -0.94
PFDN5-216ENST00000552341 TRBV6-6A0A0A6YYG2 114 aa9.17□□□□□ -0.94
PFDN5-216ENST00000552341 DBX1A6NMT0 343 aa9.17□□□□□ -0.94
PFDN5-216ENST00000552341 A8MXK9 166 aa9.17□□□□□ -0.94
PFDN5-216ENST00000552341 HSPB6O14558 160 aa9.17□□□□□ -0.94
PFDN5-216ENST00000552341 HS3ST1O14792 307 aa9.17□□□□□ -0.94
PFDN5-216ENST00000552341 ZNF205O95201 554 aa9.17□□□□□ -0.94
PFDN5-216ENST00000552341 DUS4LO95620 317 aaKnown RBP9.17□□□□□ -0.94
PFDN5-216ENST00000552341 AKR1C4P17516 323 aa9.17□□□□□ -0.94
PFDN5-216ENST00000552341 HLA-GP17693 338 aa9.17□□□□□ -0.94
PFDN5-216ENST00000552341 GLRA1P23415 457 aa9.17□□□□□ -0.94
PFDN5-216ENST00000552341 CA7P43166 264 aa9.17□□□□□ -0.94
PFDN5-216ENST00000552341 TAS2R31P59538 309 aa9.17□□□□□ -0.94
PFDN5-216ENST00000552341 RAP2BP61225 183 aa9.17□□□□□ -0.94
PFDN5-216ENST00000552341 SHEQ5VZ18 495 aa9.17□□□□□ -0.94
PFDN5-216ENST00000552341 ZNF880Q6PDB4 577 aa9.17□□□□□ -0.94
PFDN5-216ENST00000552341 MRPL30Q8TCC3 161 aaKnown RBP9.17□□□□□ -0.94
PFDN5-216ENST00000552341 RDH5Q92781 318 aa9.17□□□□□ -0.94
PFDN5-216ENST00000552341 TMPRSS13Q9BYE2 586 aa9.17□□□□□ -0.94
PFDN5-216ENST00000552341 SDHAF2Q9NX18 166 aa9.17□□□□□ -0.94
PFDN5-216ENST00000552341 DUSP13Q9UII6 198 aa9.17□□□□□ -0.94
PFDN5-216ENST00000552341 PLCE1Q9P212 2302 aa9.16□□□□□ -0.94
PFDN5-216ENST00000552341 DPRXA6NFQ7 191 aa9.16□□□□□ -0.94
PFDN5-216ENST00000552341 SLC33A1O00400 549 aaPredicted RBP9.16□□□□□ -0.94
PFDN5-216ENST00000552341 GOSR2O14653 212 aa9.16□□□□□ -0.94
PFDN5-216ENST00000552341 WNT9BO14905 357 aa9.16□□□□□ -0.94
PFDN5-216ENST00000552341 DEGS1O15121 323 aa9.16□□□□□ -0.94
PFDN5-216ENST00000552341 NXPH2O95156 264 aa9.16□□□□□ -0.94
PFDN5-216ENST00000552341 OR2H2O95918 312 aa9.16□□□□□ -0.94
PFDN5-216ENST00000552341 CFDP00746 253 aaPredicted RBP9.16□□□□□ -0.94
PFDN5-216ENST00000552341 RBMXP38159 391 aaKnown RBP9.16□□□□□ -0.94
PFDN5-216ENST00000552341 CD200P41217 278 aa9.16□□□□□ -0.94
PFDN5-216ENST00000552341 KLF3P57682 345 aaPredicted RBP9.16□□□□□ -0.94
PFDN5-216ENST00000552341 SRSF4Q08170 494 aaKnown RBP9.16□□□□□ -0.94
PFDN5-216ENST00000552341 BTN1A1Q13410 526 aa9.16□□□□□ -0.94
PFDN5-216ENST00000552341 HERPUD1Q15011 391 aa9.16□□□□□ -0.94
PFDN5-216ENST00000552341 TUSC1Q2TAM9 212 aa9.16□□□□□ -0.94
PFDN5-216ENST00000552341 IGSF11Q5DX21 431 aa9.16□□□□□ -0.94
PFDN5-216ENST00000552341 SPIN3Q5JUX0 258 aa9.16□□□□□ -0.94
PFDN5-216ENST00000552341 GAPTQ8N292 157 aa9.16□□□□□ -0.94
PFDN5-216ENST00000552341 EIF4E3Q8N5X7 224 aaKnown RBP9.16□□□□□ -0.94
PFDN5-216ENST00000552341 SCGB3A2Q96PL1 93 aa9.16□□□□□ -0.94
PFDN5-216ENST00000552341 RIMS4Q9H426 269 aaPredicted RBP9.16□□□□□ -0.94
PFDN5-216ENST00000552341 COQ3Q9NZJ6 369 aa9.16□□□□□ -0.94
PFDN5-216ENST00000552341 ZMAT5Q9UDW3 170 aaKnown RBP9.16□□□□□ -0.94
PFDN5-216ENST00000552341 TRGV8A0A0C4DH27 118 aa9.15□□□□□ -0.94
PFDN5-216ENST00000552341 LMO1P25800 156 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms