RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 TCF23Q7RTU1 214 aa15.1■□□□□ 0.01
PRPF40B-216ENST00000552301 LRRTM1Q86UE6 522 aa15.1■□□□□ 0.01
PRPF40B-216ENST00000552301 PNKDQ8N490 385 aa15.1■□□□□ 0.01
PRPF40B-216ENST00000552301 OR13D1Q8NGV5 346 aa15.1■□□□□ 0.01
PRPF40B-216ENST00000552301 COQ2Q96H96 371 aa15.1■□□□□ 0.01
PRPF40B-216ENST00000552301 DPCDQ9BVM2 203 aaPredicted RBP15.1■□□□□ 0.01
PRPF40B-216ENST00000552301 BARHL1Q9BZE3 327 aa15.1■□□□□ 0.01
PRPF40B-216ENST00000552301 SPACA1Q9HBV2 294 aa15.1■□□□□ 0.01
PRPF40B-216ENST00000552301 OR6C3Q9NZP0 311 aa15.1■□□□□ 0.01
PRPF40B-216ENST00000552301 BTBD17A6NE02 478 aa15.09■□□□□ 0.01
PRPF40B-216ENST00000552301 CLDN34H7C241 214 aa15.09■□□□□ 0.01
PRPF40B-216ENST00000552301 MELTFP08582 738 aa15.09■□□□□ 0.01
PRPF40B-216ENST00000552301 IGHV1-8P0DP01 117 aa15.09■□□□□ 0.01
PRPF40B-216ENST00000552301 MGMTP16455 207 aa15.09■□□□□ 0.01
PRPF40B-216ENST00000552301 CALRP27797 417 aaKnown RBP15.09■□□□□ 0.01
PRPF40B-216ENST00000552301 GLP1RP43220 463 aa15.09■□□□□ 0.01
PRPF40B-216ENST00000552301 GP2P55259 537 aaKnown RBP15.09■□□□□ 0.01
PRPF40B-216ENST00000552301 FABP5Q01469 135 aa15.09■□□□□ 0.01
PRPF40B-216ENST00000552301 SLC9A3R2Q15599 337 aa15.09■□□□□ 0.01
PRPF40B-216ENST00000552301 SSX1Q16384 188 aa15.09■□□□□ 0.01
PRPF40B-216ENST00000552301 TAF9Q16594 264 aa15.09■□□□□ 0.01
PRPF40B-216ENST00000552301 KCTD21Q4G0X4 260 aa15.09■□□□□ 0.01
PRPF40B-216ENST00000552301 MIDNQ504T8 468 aa15.09■□□□□ 0.01
PRPF40B-216ENST00000552301 KIAA2026Q5HYC2 2103 aa15.09■□□□□ 0.01
PRPF40B-216ENST00000552301 UBE2UQ5VVX9 321 aa15.09■□□□□ 0.01
PRPF40B-216ENST00000552301 Q6YL49 198 aa15.09■□□□□ 0.01
PRPF40B-216ENST00000552301 C11orf42Q8N5U0 333 aa15.09■□□□□ 0.01
PRPF40B-216ENST00000552301 SUMF2Q8NBJ7 301 aa15.09■□□□□ 0.01
PRPF40B-216ENST00000552301 SSMEM1Q8WWF3 244 aa15.09■□□□□ 0.01
PRPF40B-216ENST00000552301 SELENOIQ9C0D9 397 aa15.09■□□□□ 0.01
PRPF40B-216ENST00000552301 PPIL3Q9H2H8 161 aaKnown RBP15.09■□□□□ 0.01
PRPF40B-216ENST00000552301 PRDM13Q9H4Q3 707 aa15.09■□□□□ 0.01
PRPF40B-216ENST00000552301 BANF2Q9H503 90 aa15.09■□□□□ 0.01
PRPF40B-216ENST00000552301 IFT22Q9H7X7 185 aa15.09■□□□□ 0.01
PRPF40B-216ENST00000552301 PLGRKTQ9HBL7 147 aa15.09■□□□□ 0.01
PRPF40B-216ENST00000552301 TNFRSF19Q9NS68 423 aa15.09■□□□□ 0.01
PRPF40B-216ENST00000552301 NDUFB11Q9NX14 153 aa15.09■□□□□ 0.01
PRPF40B-216ENST00000552301 SESN1Q9Y6P5 492 aa15.09■□□□□ 0.01
PRPF40B-216ENST00000552301 MEIKINA0A087WXM9 373 aa15.08■□□□□ 0
PRPF40B-216ENST00000552301 CCRL2O00421 344 aa15.08■□□□□ 0
PRPF40B-216ENST00000552301 RNASE1P07998 156 aaKnown RBP15.08■□□□□ 0
PRPF40B-216ENST00000552301 HTR2CP28335 458 aa15.08■□□□□ 0
PRPF40B-216ENST00000552301 HCP5Q6MZN7 132 aa15.08■□□□□ 0
PRPF40B-216ENST00000552301 LYPD6Q86Y78 171 aa15.08■□□□□ 0
PRPF40B-216ENST00000552301 TMEM86BQ8N661 226 aa15.08■□□□□ 0
PRPF40B-216ENST00000552301 OR6M1Q8NGM8 313 aa15.08■□□□□ 0
PRPF40B-216ENST00000552301 SPATA3Q8NHX4 192 aa15.08■□□□□ 0
PRPF40B-216ENST00000552301 GCDHQ92947 438 aaPredicted RBP15.08■□□□□ 0
PRPF40B-216ENST00000552301 FAM46BQ96A09 425 aa15.08■□□□□ 0
PRPF40B-216ENST00000552301 C1orf147Q96MC9 270 aaPredicted RBP15.08■□□□□ 0
PRPF40B-216ENST00000552301 TAS2R3Q9NYW6 316 aa15.08■□□□□ 0
PRPF40B-216ENST00000552301 KIF25Q9UIL4 384 aa15.08■□□□□ 0
PRPF40B-216ENST00000552301 POMT1Q9Y6A1 747 aa15.08■□□□□ 0
PRPF40B-216ENST00000552301 H3BUI4 141 aa15.07■□□□□ 0
PRPF40B-216ENST00000552301 ARG1P05089 322 aa15.07■□□□□ 0
PRPF40B-216ENST00000552301 MYL9P24844 172 aa15.07■□□□□ 0
PRPF40B-216ENST00000552301 RANBP1P43487 201 aa15.07■□□□□ 0
PRPF40B-216ENST00000552301 DYNC1I2Q13409 638 aaKnown RBP15.07■□□□□ 0
PRPF40B-216ENST00000552301 C1orf100Q5SVJ3 147 aa15.07■□□□□ 0
PRPF40B-216ENST00000552301 OR52W1Q6IF63 320 aa15.07■□□□□ 0
PRPF40B-216ENST00000552301 LDLRAD3Q86YD5 345 aa15.07■□□□□ 0
PRPF40B-216ENST00000552301 CORO2AQ92828 525 aa15.07■□□□□ 0
PRPF40B-216ENST00000552301 DPAGT1Q9H3H5 408 aa15.07■□□□□ 0
PRPF40B-216ENST00000552301 ZNF729A6NN14 1252 aaPredicted RBP15.06■□□□□ 0
PRPF40B-216ENST00000552301 MPIG6BO95866 241 aa15.06■□□□□ 0
PRPF40B-216ENST00000552301 CDK2P24941 298 aa15.06■□□□□ 0
PRPF40B-216ENST00000552301 RBM39Q14498 530 aaKnown RBP15.06■□□□□ 0
PRPF40B-216ENST00000552301 PRAMEF5Q5TYX0 476 aa15.06■□□□□ 0
PRPF40B-216ENST00000552301 ZNF565Q8N9K5 539 aa15.06■□□□□ 0
PRPF40B-216ENST00000552301 TMEM104Q8NE00 496 aa15.06■□□□□ 0
PRPF40B-216ENST00000552301 ZNRD1Q9P1U0 126 aa15.06■□□□□ 0
PRPF40B-216ENST00000552301 AK6Q9Y3D8 172 aaKnown RBP15.06■□□□□ 0
PRPF40B-216ENST00000552301 FBN1P35555 2871 aaKnown RBP15.06■□□□□ 0
PRPF40B-216ENST00000552301 TRDV1A0A1B0GX56 115 aa15.05■□□□□ -0
PRPF40B-216ENST00000552301 TMEM30CPA0ZSE6 113 aa15.05■□□□□ -0
PRPF40B-216ENST00000552301 FAM90A10PA6NDY2 464 aa15.05■□□□□ -0
PRPF40B-216ENST00000552301 FAM90A18PA6NE21 464 aa15.05■□□□□ -0
PRPF40B-216ENST00000552301 FAM90A16PA6NEW6 464 aa15.05■□□□□ -0
PRPF40B-216ENST00000552301 FAM90A20PA6NIJ5 464 aa15.05■□□□□ -0
PRPF40B-216ENST00000552301 FAM90A8PA6NJQ4 464 aa15.05■□□□□ -0
PRPF40B-216ENST00000552301 FAM90A7PA6NKC0 464 aa15.05■□□□□ -0
PRPF40B-216ENST00000552301 FAM90A22PA8MWA6 464 aa15.05■□□□□ -0
PRPF40B-216ENST00000552301 FAM90A12PA8MX19 464 aa15.05■□□□□ -0
PRPF40B-216ENST00000552301 FAM90A5PA8MXJ8 464 aa15.05■□□□□ -0
PRPF40B-216ENST00000552301 FAM90A23PA8MXZ1 464 aa15.05■□□□□ -0
PRPF40B-216ENST00000552301 MCRIP1C9JLW8 97 aa15.05■□□□□ -0
PRPF40B-216ENST00000552301 PDCD5O14737 125 aa15.05■□□□□ -0
PRPF40B-216ENST00000552301 BPNT1O95861 308 aa15.05■□□□□ -0
PRPF40B-216ENST00000552301 FAM90A15PP0C7V4 464 aa15.05■□□□□ -0
PRPF40B-216ENST00000552301 FAM90A13PP0C7W8 464 aa15.05■□□□□ -0
PRPF40B-216ENST00000552301 FAM90A14PP0C7W9 464 aa15.05■□□□□ -0
PRPF40B-216ENST00000552301 FAM90A24PP0C7X0 464 aa15.05■□□□□ -0
PRPF40B-216ENST00000552301 PSMD7P51665 324 aa15.05■□□□□ -0
PRPF40B-216ENST00000552301 RAB11BQ15907 218 aa15.05■□□□□ -0
PRPF40B-216ENST00000552301 RSBN1Q5VWQ0 802 aaPredicted RBP15.05■□□□□ -0
PRPF40B-216ENST00000552301 C16orf87Q6PH81 154 aa15.05■□□□□ -0
PRPF40B-216ENST00000552301 HEPN1Q6WQI6 88 aa15.05■□□□□ -0
PRPF40B-216ENST00000552301 KCNG3Q8TAE7 436 aa15.05■□□□□ -0
PRPF40B-216ENST00000552301 PLPPR1Q8TBJ4 325 aa15.05■□□□□ -0
PRPF40B-216ENST00000552301 Q96M66 194 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms