RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 C11orf40Q8WZ69 217 aa1.82□□□□□ -2.12
CPSF6-207ENST00000551516 RAB1CQ92928 201 aa1.82□□□□□ -2.12
CPSF6-207ENST00000551516 C11orf52Q96A22 123 aa1.82□□□□□ -2.12
CPSF6-207ENST00000551516 TLCD1Q96CP7 247 aa1.82□□□□□ -2.12
CPSF6-207ENST00000551516 SLC25A36Q96CQ1 311 aa1.82□□□□□ -2.12
CPSF6-207ENST00000551516 CMBLQ96DG6 245 aa1.82□□□□□ -2.12
CPSF6-207ENST00000551516 SEH1LQ96EE3 360 aa1.82□□□□□ -2.12
CPSF6-207ENST00000551516 OR2V2Q96R30 315 aa1.82□□□□□ -2.12
CPSF6-207ENST00000551516 PANX1Q96RD7 426 aa1.82□□□□□ -2.12
CPSF6-207ENST00000551516 ATF6BQ99941 703 aa1.82□□□□□ -2.12
CPSF6-207ENST00000551516 EBF4Q9BQW3 602 aa1.82□□□□□ -2.12
CPSF6-207ENST00000551516 CHCHD5Q9BSY4 110 aa1.82□□□□□ -2.12
CPSF6-207ENST00000551516 CABLES2Q9BTV7 478 aa1.82□□□□□ -2.12
CPSF6-207ENST00000551516 DPY30Q9C005 99 aa1.82□□□□□ -2.12
CPSF6-207ENST00000551516 TXNIPQ9H3M7 391 aa1.82□□□□□ -2.12
CPSF6-207ENST00000551516 C1orf198Q9H425 327 aa1.82□□□□□ -2.12
CPSF6-207ENST00000551516 ROPN1Q9HAT0 212 aaPredicted RBP1.82□□□□□ -2.12
CPSF6-207ENST00000551516 DYNLRB1Q9NP97 96 aa1.82□□□□□ -2.12
CPSF6-207ENST00000551516 TUBG2Q9NRH3 451 aa1.82□□□□□ -2.12
CPSF6-207ENST00000551516 INPP5EQ9NRR6 644 aa1.82□□□□□ -2.12
CPSF6-207ENST00000551516 MRPL22Q9NWU5 206 aaKnown RBP1.82□□□□□ -2.12
CPSF6-207ENST00000551516 P2RX2Q9UBL9 471 aa1.82□□□□□ -2.12
CPSF6-207ENST00000551516 ATPIF1Q9UII2 106 aa1.82□□□□□ -2.12
CPSF6-207ENST00000551516 RPUSD1Q9UJJ7 312 aaKnown RBP1.82□□□□□ -2.12
CPSF6-207ENST00000551516 FBXL3Q9UKT7 428 aa1.82□□□□□ -2.12
CPSF6-207ENST00000551516 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP1.82□□□□□ -2.12
CPSF6-207ENST00000551516 FOXJ3Q9UPW0 622 aa1.82□□□□□ -2.12
CPSF6-207ENST00000551516 SIGLEC7Q9Y286 467 aa1.82□□□□□ -2.12
CPSF6-207ENST00000551516 IFT52Q9Y366 437 aa1.82□□□□□ -2.12
CPSF6-207ENST00000551516 FIS1Q9Y3D6 152 aa1.82□□□□□ -2.12
CPSF6-207ENST00000551516 MAB21L2Q9Y586 359 aa1.82□□□□□ -2.12
CPSF6-207ENST00000551516 LHFPL6Q9Y693 200 aa1.82□□□□□ -2.12
CPSF6-207ENST00000551516 DYNC1H1Q14204 4646 aaKnown RBP1.82□□□□□ -2.12
CPSF6-207ENST00000551516 DNAH17Q9UFH2 4485 aa1.81□□□□□ -2.12
CPSF6-207ENST00000551516 A0A087WUU8 490 aa1.81□□□□□ -2.12
CPSF6-207ENST00000551516 A0A0A6YYD4 124 aa1.81□□□□□ -2.12
CPSF6-207ENST00000551516 C5orf49A4QMS7 147 aa1.81□□□□□ -2.12
CPSF6-207ENST00000551516 TRAPPC13A5PLN9 417 aa1.81□□□□□ -2.12
CPSF6-207ENST00000551516 A6NDX4 124 aa1.81□□□□□ -2.12
CPSF6-207ENST00000551516 ODF3BA8MYP8 253 aa1.81□□□□□ -2.12
CPSF6-207ENST00000551516 F5H5P2 479 aa1.81□□□□□ -2.12
CPSF6-207ENST00000551516 F8WDY8 70 aa1.81□□□□□ -2.12
CPSF6-207ENST00000551516 H3BTX0 84 aa1.81□□□□□ -2.12
CPSF6-207ENST00000551516 SOCS3O14543 225 aa1.81□□□□□ -2.12
CPSF6-207ENST00000551516 RFXANKO14593 260 aa1.81□□□□□ -2.12
CPSF6-207ENST00000551516 PIN1P1O15428 100 aa1.81□□□□□ -2.12
CPSF6-207ENST00000551516 OR10H3O60404 316 aa1.81□□□□□ -2.12
CPSF6-207ENST00000551516 OR7A10O76100 309 aa1.81□□□□□ -2.12
CPSF6-207ENST00000551516 DIRAS3O95661 229 aa1.81□□□□□ -2.12
CPSF6-207ENST00000551516 KRT75O95678 551 aa1.81□□□□□ -2.12
CPSF6-207ENST00000551516 ECDO95905 644 aaPredicted RBP1.81□□□□□ -2.12
CPSF6-207ENST00000551516 CYB5R3P00387 301 aaPredicted RBP1.81□□□□□ -2.12
CPSF6-207ENST00000551516 IGLV3-1P01715 115 aa1.81□□□□□ -2.12
CPSF6-207ENST00000551516 IGHG1P01857 330 aa1.81□□□□□ -2.12
CPSF6-207ENST00000551516 OPN1SWP03999 348 aa1.81□□□□□ -2.12
CPSF6-207ENST00000551516 TFF1P04155 84 aa1.81□□□□□ -2.12
CPSF6-207ENST00000551516 HLA-DPB1P04440 258 aa1.81□□□□□ -2.12
CPSF6-207ENST00000551516 FCGR3AP08637 254 aa1.81□□□□□ -2.12
CPSF6-207ENST00000551516 ACSM4P0C7M7 580 aa1.81□□□□□ -2.12
CPSF6-207ENST00000551516 CGB3P0DN86 165 aa1.81□□□□□ -2.12
CPSF6-207ENST00000551516 CGB7P0DN87 165 aa1.81□□□□□ -2.12
CPSF6-207ENST00000551516 CD28P10747 220 aa1.81□□□□□ -2.12
CPSF6-207ENST00000551516 NCF2P19878 526 aaPredicted RBP1.81□□□□□ -2.12
CPSF6-207ENST00000551516 PAICSP22234 425 aaKnown RBP1.81□□□□□ -2.12
CPSF6-207ENST00000551516 MT3P25713 68 aa1.81□□□□□ -2.12
CPSF6-207ENST00000551516 PAX6P26367 422 aa1.81□□□□□ -2.12
CPSF6-207ENST00000551516 CASQ1P31415 396 aa1.81□□□□□ -2.12
CPSF6-207ENST00000551516 OMPP47874 163 aa1.81□□□□□ -2.12
CPSF6-207ENST00000551516 POLR2JP52435 117 aaKnown RBP1.81□□□□□ -2.12
CPSF6-207ENST00000551516 LSM6P62312 80 aaKnown RBP1.81□□□□□ -2.12
CPSF6-207ENST00000551516 BLCAPP62952 87 aa1.81□□□□□ -2.12
CPSF6-207ENST00000551516 ERVK-25P63136 954 aa1.81□□□□□ -2.12
CPSF6-207ENST00000551516 TNFAIP6P98066 277 aaPredicted RBP1.81□□□□□ -2.12
CPSF6-207ENST00000551516 CDK6Q00534 326 aa1.81□□□□□ -2.12
CPSF6-207ENST00000551516 PRB3Q04118 309 aaPredicted RBP1.81□□□□□ -2.12
CPSF6-207ENST00000551516 HERPUD1Q15011 391 aa1.81□□□□□ -2.12
CPSF6-207ENST00000551516 DGUOKQ16854 277 aa1.81□□□□□ -2.12
CPSF6-207ENST00000551516 CFAP157Q5JU67 520 aa1.81□□□□□ -2.12
CPSF6-207ENST00000551516 BEND6Q5SZJ8 279 aaPredicted RBP1.81□□□□□ -2.12
CPSF6-207ENST00000551516 ATAD3BQ5T9A4 648 aa1.81□□□□□ -2.12
CPSF6-207ENST00000551516 LINC01590Q5TEZ4 76 aa1.81□□□□□ -2.12
CPSF6-207ENST00000551516 STUMQ69YW2 141 aa1.81□□□□□ -2.12
CPSF6-207ENST00000551516 OR2T2Q6IF00 324 aa1.81□□□□□ -2.12
CPSF6-207ENST00000551516 TBPL2Q6SJ96 375 aa1.81□□□□□ -2.12
CPSF6-207ENST00000551516 C10orf99Q6UWK7 81 aa1.81□□□□□ -2.12
CPSF6-207ENST00000551516 ZNF826PQ6ZT77 177 aa1.81□□□□□ -2.12
CPSF6-207ENST00000551516 TMUB2Q71RG4 321 aa1.81□□□□□ -2.12
CPSF6-207ENST00000551516 SLC16A14Q7RTX9 510 aa1.81□□□□□ -2.12
CPSF6-207ENST00000551516 OR6V1Q8N148 313 aa1.81□□□□□ -2.12
CPSF6-207ENST00000551516 SPICQ8N5J4 248 aa1.81□□□□□ -2.12
CPSF6-207ENST00000551516 MINDY2Q8NBR6 621 aa1.81□□□□□ -2.12
CPSF6-207ENST00000551516 C19orf18Q8NEA5 215 aa1.81□□□□□ -2.12
CPSF6-207ENST00000551516 SLC26A10Q8NG04 563 aa1.81□□□□□ -2.12
CPSF6-207ENST00000551516 OR10AD1Q8NGE0 317 aa1.81□□□□□ -2.12
CPSF6-207ENST00000551516 OR52J3Q8NH60 311 aa1.81□□□□□ -2.12
CPSF6-207ENST00000551516 ANGPTL6Q8NI99 470 aa1.81□□□□□ -2.12
CPSF6-207ENST00000551516 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP1.81□□□□□ -2.12
CPSF6-207ENST00000551516 C7orf34Q96L11 122 aa1.81□□□□□ -2.12
CPSF6-207ENST00000551516 P2RX4Q99571 388 aa1.81□□□□□ -2.12
CPSF6-207ENST00000551516 MCHR1Q99705 422 aa1.81□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms