RNA–Protein interactions for RNA: ENST00000550841.1

NEK3-202, Transcript of NIMA related kinase 3, humanhuman

TSL 4

Gene NEK3, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-202ENST00000550841 KRBOX4Q5JUW0 171 aa17.71■□□□□ 0.43
NEK3-202ENST00000550841 RAB12Q6IQ22 244 aa17.71■□□□□ 0.43
NEK3-202ENST00000550841 FAM185AQ8N0U4 392 aa17.71■□□□□ 0.43
NEK3-202ENST00000550841 FAM89BQ8N5H3 189 aa17.71■□□□□ 0.43
NEK3-202ENST00000550841 OR4M1Q8NGD0 313 aa17.71■□□□□ 0.43
NEK3-202ENST00000550841 OR56B1Q8NGI3 324 aa17.71■□□□□ 0.43
NEK3-202ENST00000550841 LPAR5Q9H1C0 372 aa17.71■□□□□ 0.43
NEK3-202ENST00000550841 DCSTAMPQ9H295 470 aa17.71■□□□□ 0.43
NEK3-202ENST00000550841 KCNK15Q9H427 330 aa17.71■□□□□ 0.43
NEK3-202ENST00000550841 RCC2Q9P258 522 aaKnown RBP17.71■□□□□ 0.43
NEK3-202ENST00000550841 ETV7Q9Y603 341 aa17.71■□□□□ 0.43
NEK3-202ENST00000550841 AUP1Q9Y679 476 aa17.71■□□□□ 0.43
NEK3-202ENST00000550841 HSPB6O14558 160 aa17.7■□□□□ 0.42
NEK3-202ENST00000550841 HNF1AP20823 631 aa17.7■□□□□ 0.42
NEK3-202ENST00000550841 BLVRBP30043 206 aaPredicted RBP17.7■□□□□ 0.42
NEK3-202ENST00000550841 P2RX3P56373 397 aa17.7■□□□□ 0.42
NEK3-202ENST00000550841 PAX5Q02548 391 aa17.7■□□□□ 0.42
NEK3-202ENST00000550841 AESQ08117 197 aa17.7■□□□□ 0.42
NEK3-202ENST00000550841 CR1LQ2VPA4 569 aa17.7■□□□□ 0.42
NEK3-202ENST00000550841 C1orf122Q6ZSJ8 110 aa17.7■□□□□ 0.42
NEK3-202ENST00000550841 BPIFB2Q8N4F0 458 aa17.7■□□□□ 0.42
NEK3-202ENST00000550841 KIR3DL3Q8N743 410 aa17.7■□□□□ 0.42
NEK3-202ENST00000550841 NEK7Q8TDX7 302 aa17.7■□□□□ 0.42
NEK3-202ENST00000550841 KCTD12Q96CX2 325 aaKnown RBP17.7■□□□□ 0.42
NEK3-202ENST00000550841 C19orf12Q9NSK7 152 aa17.7■□□□□ 0.42
NEK3-202ENST00000550841 KPTNQ9Y664 436 aa17.7■□□□□ 0.42
NEK3-202ENST00000550841 A0A0B4J203 849 aa17.69■□□□□ 0.42
NEK3-202ENST00000550841 hCG_1809904A0A1W2PP81 198 aa17.69■□□□□ 0.42
NEK3-202ENST00000550841 A0A1W2PPE2 198 aa17.69■□□□□ 0.42
NEK3-202ENST00000550841 A0A1W2PR64 198 aa17.69■□□□□ 0.42
NEK3-202ENST00000550841 A0A1W2PRV1 198 aa17.69■□□□□ 0.42
NEK3-202ENST00000550841 CA11O75493 328 aa17.69■□□□□ 0.42
NEK3-202ENST00000550841 METTL11BQ5VVY1 283 aa17.69■□□□□ 0.42
NEK3-202ENST00000550841 TMEM200BQ69YZ2 307 aa17.69■□□□□ 0.42
NEK3-202ENST00000550841 TMPRSS13Q9BYE2 586 aa17.69■□□□□ 0.42
NEK3-202ENST00000550841 PLEKHJ1Q9NW61 149 aa17.69■□□□□ 0.42
NEK3-202ENST00000550841 ONECUT1Q9UBC0 465 aa17.69■□□□□ 0.42
NEK3-202ENST00000550841 M0R1W7 72 aa17.68■□□□□ 0.42
NEK3-202ENST00000550841 SCGNO76038 276 aa17.68■□□□□ 0.42
NEK3-202ENST00000550841 SNRPBP14678 240 aaKnown RBP17.68■□□□□ 0.42
NEK3-202ENST00000550841 VEGFCP49767 419 aa17.68■□□□□ 0.42
NEK3-202ENST00000550841 ARF6P62330 175 aa17.68■□□□□ 0.42
NEK3-202ENST00000550841 DYNC1I2Q13409 638 aaKnown RBP17.68■□□□□ 0.42
NEK3-202ENST00000550841 ATXN7L3Q14CW9 347 aaPredicted RBP17.68■□□□□ 0.42
NEK3-202ENST00000550841 SIGIRRQ6IA17 410 aa17.68■□□□□ 0.42
NEK3-202ENST00000550841 SLC35E4Q6ICL7 350 aa17.68■□□□□ 0.42
NEK3-202ENST00000550841 NICN1Q9BSH3 213 aa17.68■□□□□ 0.42
NEK3-202ENST00000550841 OR6C3Q9NZP0 311 aa17.68■□□□□ 0.42
NEK3-202ENST00000550841 ZNF581Q9P0T4 197 aa17.68■□□□□ 0.42
NEK3-202ENST00000550841 SPATA2Q9UM82 520 aa17.68■□□□□ 0.42
NEK3-202ENST00000550841 UBE2J1Q9Y385 318 aaPredicted RBP17.68■□□□□ 0.42
NEK3-202ENST00000550841 LINC00312Q9Y6C7 94 aa17.68■□□□□ 0.42
NEK3-202ENST00000550841 CEPT1Q9Y6K0 416 aa17.68■□□□□ 0.42
NEK3-202ENST00000550841 HIVEP2P31629 2446 aa17.67■□□□□ 0.42
NEK3-202ENST00000550841 TRGV10A0A0A0MS01 117 aa17.67■□□□□ 0.42
NEK3-202ENST00000550841 ODAMA1E959 279 aa17.67■□□□□ 0.42
NEK3-202ENST00000550841 CCDC160A6NGH7 325 aa17.67■□□□□ 0.42
NEK3-202ENST00000550841 CHATP28329 748 aa17.67■□□□□ 0.42
NEK3-202ENST00000550841 GLIPR1P48060 266 aa17.67■□□□□ 0.42
NEK3-202ENST00000550841 NKAPLQ5M9Q1 402 aa17.67■□□□□ 0.42
NEK3-202ENST00000550841 FAM120AOSQ5T036 256 aa17.67■□□□□ 0.42
NEK3-202ENST00000550841 BRICD5Q6PL45 260 aa17.67■□□□□ 0.42
NEK3-202ENST00000550841 Q6ZTK2 550 aa17.67■□□□□ 0.42
NEK3-202ENST00000550841 ZNF565Q8N9K5 539 aa17.67■□□□□ 0.42
NEK3-202ENST00000550841 NDNFQ8TB73 568 aa17.67■□□□□ 0.42
NEK3-202ENST00000550841 LGALS14Q8TCE9 139 aa17.67■□□□□ 0.42
NEK3-202ENST00000550841 ACOT12Q8WYK0 555 aa17.67■□□□□ 0.42
NEK3-202ENST00000550841 AP3S1Q92572 193 aa17.67■□□□□ 0.42
NEK3-202ENST00000550841 CORO2AQ92828 525 aa17.67■□□□□ 0.42
NEK3-202ENST00000550841 ISOC1Q96CN7 298 aa17.67■□□□□ 0.42
NEK3-202ENST00000550841 WDFY2Q96P53 400 aa17.67■□□□□ 0.42
NEK3-202ENST00000550841 ATG5Q9H1Y0 275 aa17.67■□□□□ 0.42
NEK3-202ENST00000550841 ETAA1Q9NY74 926 aa17.67■□□□□ 0.42
NEK3-202ENST00000550841 NDUFA13Q9P0J0 144 aa17.67■□□□□ 0.42
NEK3-202ENST00000550841 HSF4Q9ULV5 492 aa17.67■□□□□ 0.42
NEK3-202ENST00000550841 TMEM30CPA0ZSE6 113 aa17.66■□□□□ 0.42
NEK3-202ENST00000550841 SOCS1O15524 211 aa17.66■□□□□ 0.42
NEK3-202ENST00000550841 TOX4O94842 621 aa17.66■□□□□ 0.42
NEK3-202ENST00000550841 PAHP00439 452 aa17.66■□□□□ 0.42
NEK3-202ENST00000550841 SOX6P35712 828 aa17.66■□□□□ 0.42
NEK3-202ENST00000550841 ARL6IP1Q15041 203 aa17.66■□□□□ 0.42
NEK3-202ENST00000550841 RSBN1Q5VWQ0 802 aaPredicted RBP17.66■□□□□ 0.42
NEK3-202ENST00000550841 METAP1DQ6UB28 335 aaPredicted RBP17.66■□□□□ 0.42
NEK3-202ENST00000550841 TRAPPC6BQ86SZ2 158 aa17.66■□□□□ 0.42
NEK3-202ENST00000550841 TPRX1Q8N7U7 411 aa17.66■□□□□ 0.42
NEK3-202ENST00000550841 PHF21AQ96BD5 680 aa17.66■□□□□ 0.42
NEK3-202ENST00000550841 COQ2Q96H96 371 aa17.66■□□□□ 0.42
NEK3-202ENST00000550841 ING3Q9NXR8 418 aa17.66■□□□□ 0.42
NEK3-202ENST00000550841 TAS2R3Q9NYW6 316 aa17.66■□□□□ 0.42
NEK3-202ENST00000550841 CDC42EP3Q9UKI2 254 aa17.66■□□□□ 0.42
NEK3-202ENST00000550841 TLN2Q9Y4G6 2542 aa17.65■□□□□ 0.42
NEK3-202ENST00000550841 MEIKINA0A087WXM9 373 aa17.65■□□□□ 0.42
NEK3-202ENST00000550841 A0A0A6YYD4 124 aa17.65■□□□□ 0.42
NEK3-202ENST00000550841 ZNF728P0DKX0 622 aa17.65■□□□□ 0.42
NEK3-202ENST00000550841 ZNF182P17025 639 aaPredicted RBP17.65■□□□□ 0.42
NEK3-202ENST00000550841 EFNB2P52799 333 aa17.65■□□□□ 0.42
NEK3-202ENST00000550841 MZT2AQ6P582 158 aa17.65■□□□□ 0.42
NEK3-202ENST00000550841 OR10R2Q8NGX6 335 aa17.65■□□□□ 0.42
NEK3-202ENST00000550841 NANPQ8TBE9 248 aa17.65■□□□□ 0.42
NEK3-202ENST00000550841 PLPPR1Q8TBJ4 325 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms