RNA–Protein interactions for RNA: ENST00000550504.5

RAB5C-207, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-207ENST00000550504 PYDC2Q56P42 97 aa8.56□□□□□ -1.04
RAB5C-207ENST00000550504 BAIAP2L2Q6UXY1 529 aa8.56□□□□□ -1.04
RAB5C-207ENST00000550504 OR8H2Q8N162 312 aa8.56□□□□□ -1.04
RAB5C-207ENST00000550504 MFSD4AQ8N468 514 aa8.56□□□□□ -1.04
RAB5C-207ENST00000550504 TPRX1Q8N7U7 411 aa8.56□□□□□ -1.04
RAB5C-207ENST00000550504 CLDND2Q8NHS1 167 aa8.56□□□□□ -1.04
RAB5C-207ENST00000550504 PPP1R35Q8TAP8 253 aa8.56□□□□□ -1.04
RAB5C-207ENST00000550504 NUDCD2Q8WVJ2 157 aa8.56□□□□□ -1.04
RAB5C-207ENST00000550504 ST8SIA4Q92187 359 aa8.56□□□□□ -1.04
RAB5C-207ENST00000550504 TSC22D3Q99576 134 aa8.56□□□□□ -1.04
RAB5C-207ENST00000550504 NUDT16L1Q9BRJ7 211 aaKnown RBP8.56□□□□□ -1.04
RAB5C-207ENST00000550504 HDHD3Q9BSH5 251 aaPredicted RBP8.56□□□□□ -1.04
RAB5C-207ENST00000550504 SHARPINQ9H0F6 387 aa8.56□□□□□ -1.04
RAB5C-207ENST00000550504 PATZ1Q9HBE1 687 aaKnown RBP8.56□□□□□ -1.04
RAB5C-207ENST00000550504 CHMP1AQ9HD42 196 aaPredicted RBP8.56□□□□□ -1.04
RAB5C-207ENST00000550504 AKIP1Q9NQ31 210 aa8.56□□□□□ -1.04
RAB5C-207ENST00000550504 KAAG1Q9UBP8 84 aa8.56□□□□□ -1.04
RAB5C-207ENST00000550504 SLC25A10Q9UBX3 287 aaPredicted RBP8.56□□□□□ -1.04
RAB5C-207ENST00000550504 MIOXQ9UGB7 285 aa8.56□□□□□ -1.04
RAB5C-207ENST00000550504 IGHV4-61A0A0C4DH41 118 aa8.55□□□□□ -1.04
RAB5C-207ENST00000550504 MEX3AA1L020 520 aaKnown RBP8.55□□□□□ -1.04
RAB5C-207ENST00000550504 MEIOCA2RUB1 952 aa8.55□□□□□ -1.04
RAB5C-207ENST00000550504 DVL1O14640 695 aa8.55□□□□□ -1.04
RAB5C-207ENST00000550504 FCN3O75636 299 aa8.55□□□□□ -1.04
RAB5C-207ENST00000550504 GLAP06280 429 aa8.55□□□□□ -1.04
RAB5C-207ENST00000550504 FCER2P06734 321 aa8.55□□□□□ -1.04
RAB5C-207ENST00000550504 GSTP1P09211 210 aaKnown RBP8.55□□□□□ -1.04
RAB5C-207ENST00000550504 WNT2P09544 360 aa8.55□□□□□ -1.04
RAB5C-207ENST00000550504 CD3GP09693 182 aa8.55□□□□□ -1.04
RAB5C-207ENST00000550504 PRSS3P35030 304 aa8.55□□□□□ -1.04
RAB5C-207ENST00000550504 ETV6P41212 452 aa8.55□□□□□ -1.04
RAB5C-207ENST00000550504 EDDM3BP56851 147 aa8.55□□□□□ -1.04
RAB5C-207ENST00000550504 MRPS15P82914 257 aaKnown RBP8.55□□□□□ -1.04
RAB5C-207ENST00000550504 PITPNAQ00169 270 aa8.55□□□□□ -1.04
RAB5C-207ENST00000550504 ARL6IP1Q15041 203 aa8.55□□□□□ -1.04
RAB5C-207ENST00000550504 LRRC10Q5BKY1 277 aa8.55□□□□□ -1.04
RAB5C-207ENST00000550504 HACD4Q5VWC8 232 aa8.55□□□□□ -1.04
RAB5C-207ENST00000550504 PYHIN1Q6K0P9 492 aa8.55□□□□□ -1.04
RAB5C-207ENST00000550504 DNM1P46Q6ZS02 220 aa8.55□□□□□ -1.04
RAB5C-207ENST00000550504 LINC00299Q6ZSB3 139 aa8.55□□□□□ -1.04
RAB5C-207ENST00000550504 GDPD3Q7L5L3 318 aa8.55□□□□□ -1.04
RAB5C-207ENST00000550504 NLRC3Q7RTR2 1065 aa8.55□□□□□ -1.04
RAB5C-207ENST00000550504 OR8B3Q8NGG8 313 aa8.55□□□□□ -1.04
RAB5C-207ENST00000550504 H1FXQ92522 213 aaKnown RBP8.55□□□□□ -1.04
RAB5C-207ENST00000550504 NEIL1Q96FI4 390 aaPredicted RBP8.55□□□□□ -1.04
RAB5C-207ENST00000550504 OR8B2Q96RD0 313 aa8.55□□□□□ -1.04
RAB5C-207ENST00000550504 CMSS1Q9BQ75 279 aaKnown RBP8.55□□□□□ -1.04
RAB5C-207ENST00000550504 SOSTQ9BQB4 213 aa8.55□□□□□ -1.04
RAB5C-207ENST00000550504 FAM234AQ9H0X4 552 aa8.55□□□□□ -1.04
RAB5C-207ENST00000550504 TACC2O95359 2948 aa8.55□□□□□ -1.04
RAB5C-207ENST00000550504 MEIKINA0A087WXM9 373 aa8.54□□□□□ -1.04
RAB5C-207ENST00000550504 TRAV39A0A0B4J263 110 aa8.54□□□□□ -1.04
RAB5C-207ENST00000550504 SERPINE3A8MV23 424 aa8.54□□□□□ -1.04
RAB5C-207ENST00000550504 J3QRK9 145 aa8.54□□□□□ -1.04
RAB5C-207ENST00000550504 MGST3O14880 152 aa8.54□□□□□ -1.04
RAB5C-207ENST00000550504 SSX5O60225 188 aa8.54□□□□□ -1.04
RAB5C-207ENST00000550504 IGHV2-5P01817 119 aa8.54□□□□□ -1.04
RAB5C-207ENST00000550504 MELTFP08582 738 aa8.54□□□□□ -1.04
RAB5C-207ENST00000550504 GLIPR1P48060 266 aa8.54□□□□□ -1.04
RAB5C-207ENST00000550504 GNB2P62879 340 aa8.54□□□□□ -1.04
RAB5C-207ENST00000550504 DGCR2P98153 550 aa8.54□□□□□ -1.04
RAB5C-207ENST00000550504 ZNF45Q02386 682 aa8.54□□□□□ -1.04
RAB5C-207ENST00000550504 ZNF846Q147U1 533 aa8.54□□□□□ -1.04
RAB5C-207ENST00000550504 ZNF79Q15937 498 aa8.54□□□□□ -1.04
RAB5C-207ENST00000550504 PNLIPRP3Q17RR3 467 aa8.54□□□□□ -1.04
RAB5C-207ENST00000550504 KRBOX4Q5JUW0 171 aa8.54□□□□□ -1.04
RAB5C-207ENST00000550504 RSBN1Q5VWQ0 802 aaPredicted RBP8.54□□□□□ -1.04
RAB5C-207ENST00000550504 ZNF841Q6ZN19 808 aa8.54□□□□□ -1.04
RAB5C-207ENST00000550504 TRAPPC6BQ86SZ2 158 aa8.54□□□□□ -1.04
RAB5C-207ENST00000550504 KRTAP1-3Q8IUG1 177 aa8.54□□□□□ -1.04
RAB5C-207ENST00000550504 OR5D13Q8NGL4 314 aa8.54□□□□□ -1.04
RAB5C-207ENST00000550504 OR4K15Q8NH41 348 aa8.54□□□□□ -1.04
RAB5C-207ENST00000550504 SETD6Q8TBK2 473 aa8.54□□□□□ -1.04
RAB5C-207ENST00000550504 C15orf40Q8WUR7 153 aa8.54□□□□□ -1.04
RAB5C-207ENST00000550504 CCDC107Q8WV48 283 aa8.54□□□□□ -1.04
RAB5C-207ENST00000550504 S100ZQ8WXG8 99 aa8.54□□□□□ -1.04
RAB5C-207ENST00000550504 MAFIPQ8WZ33 124 aa8.54□□□□□ -1.04
RAB5C-207ENST00000550504 COQ2Q96H96 371 aa8.54□□□□□ -1.04
RAB5C-207ENST00000550504 Q96MF0 132 aa8.54□□□□□ -1.04
RAB5C-207ENST00000550504 DCTN5Q9BTE1 182 aa8.54□□□□□ -1.04
RAB5C-207ENST00000550504 WDR12Q9GZL7 423 aaKnown RBP8.54□□□□□ -1.04
RAB5C-207ENST00000550504 SRRQ9GZT4 340 aa8.54□□□□□ -1.04
RAB5C-207ENST00000550504 C12orf4Q9NQ89 552 aa8.54□□□□□ -1.04
RAB5C-207ENST00000550504 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.54□□□□□ -1.04
RAB5C-207ENST00000550504 CLN8Q9UBY8 286 aa8.54□□□□□ -1.04
RAB5C-207ENST00000550504 ZNF230Q9UIE0 474 aaPredicted RBP8.54□□□□□ -1.04
RAB5C-207ENST00000550504 KIF25Q9UIL4 384 aa8.54□□□□□ -1.04
RAB5C-207ENST00000550504 ITGB1BP2Q9UKP3 347 aa8.54□□□□□ -1.04
RAB5C-207ENST00000550504 CCDC168Q8NDH2 2452 aa8.54□□□□□ -1.04
RAB5C-207ENST00000550504 TMEM30CPA0ZSE6 113 aa8.53□□□□□ -1.04
RAB5C-207ENST00000550504 F5H0A9 414 aaPredicted RBP8.53□□□□□ -1.04
RAB5C-207ENST00000550504 PHF1O43189 567 aaPredicted RBP8.53□□□□□ -1.04
RAB5C-207ENST00000550504 TPPPO94811 219 aa8.53□□□□□ -1.04
RAB5C-207ENST00000550504 MT-ND4P03905 459 aa8.53□□□□□ -1.04
RAB5C-207ENST00000550504 CSN2P05814 226 aa8.53□□□□□ -1.04
RAB5C-207ENST00000550504 INHBBP09529 407 aa8.53□□□□□ -1.04
RAB5C-207ENST00000550504 SLC25A16P16260 332 aa8.53□□□□□ -1.04
RAB5C-207ENST00000550504 PTBP1P26599 531 aaKnown RBP eCLIP8.53□□□□□ -1.04
RAB5C-207ENST00000550504 IL2RGP31785 369 aa8.53□□□□□ -1.04
RAB5C-207ENST00000550504 KCNJ3P48549 501 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms