RNA–Protein interactions for RNA: ENST00000550477.5

SMARCD1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-209ENST00000550477 RAB7AP51149 207 aa18.33■□□□□ 0.52
SMARCD1-209ENST00000550477 MADCAM1Q13477 382 aa18.33■□□□□ 0.52
SMARCD1-209ENST00000550477 COMMD1Q8N668 190 aa18.33■□□□□ 0.52
SMARCD1-209ENST00000550477 HAVCR2Q8TDQ0 301 aa18.33■□□□□ 0.52
SMARCD1-209ENST00000550477 RNFT2Q96EX2 444 aa18.33■□□□□ 0.52
SMARCD1-209ENST00000550477 COQ2Q96H96 371 aa18.33■□□□□ 0.52
SMARCD1-209ENST00000550477 NCOR1P1Q9H4R4 102 aa18.33■□□□□ 0.52
SMARCD1-209ENST00000550477 OAZ3Q9UMX2 235 aa18.33■□□□□ 0.52
SMARCD1-209ENST00000550477 MEIKINA0A087WXM9 373 aa18.32■□□□□ 0.52
SMARCD1-209ENST00000550477 WI2-2373I1.2A0A1W2PRP0 233 aa18.32■□□□□ 0.52
SMARCD1-209ENST00000550477 SERPINE3A8MV23 424 aa18.32■□□□□ 0.52
SMARCD1-209ENST00000550477 J3QR06 171 aa18.32■□□□□ 0.52
SMARCD1-209ENST00000550477 SNRNP70P08621 437 aaKnown RBP18.32■□□□□ 0.52
SMARCD1-209ENST00000550477 TMEM11P17152 192 aa18.32■□□□□ 0.52
SMARCD1-209ENST00000550477 NANOS3P60323 173 aaKnown RBP18.32■□□□□ 0.52
SMARCD1-209ENST00000550477 KRTAP10-11P60412 298 aa18.32■□□□□ 0.52
SMARCD1-209ENST00000550477 ALKBH1Q13686 389 aaKnown RBP18.32■□□□□ 0.52
SMARCD1-209ENST00000550477 KISS1Q15726 138 aa18.32■□□□□ 0.52
SMARCD1-209ENST00000550477 C17orf58Q2M2W7 97 aa18.32■□□□□ 0.52
SMARCD1-209ENST00000550477 PAN3Q58A45 887 aaKnown RBP18.32■□□□□ 0.52
SMARCD1-209ENST00000550477 C10orf99Q6UWK7 81 aa18.32■□□□□ 0.52
SMARCD1-209ENST00000550477 MRPL41Q8IXM3 137 aaKnown RBP18.32■□□□□ 0.52
SMARCD1-209ENST00000550477 KIRREL1Q96J84 757 aa18.32■□□□□ 0.52
SMARCD1-209ENST00000550477 NR1H4Q96RI1 486 aaPredicted RBP18.32■□□□□ 0.52
SMARCD1-209ENST00000550477 IDI2-AS1Q9NZ38 188 aa18.32■□□□□ 0.52
SMARCD1-209ENST00000550477 MYRFQ9Y2G1 1151 aa18.32■□□□□ 0.52
SMARCD1-209ENST00000550477 FAM90A18PA6NE21 464 aa18.31■□□□□ 0.52
SMARCD1-209ENST00000550477 FAM90A16PA6NEW6 464 aa18.31■□□□□ 0.52
SMARCD1-209ENST00000550477 FAM90A20PA6NIJ5 464 aa18.31■□□□□ 0.52
SMARCD1-209ENST00000550477 FAM90A9PA6NNJ1 464 aa18.31■□□□□ 0.52
SMARCD1-209ENST00000550477 FAM90A12PA8MX19 464 aa18.31■□□□□ 0.52
SMARCD1-209ENST00000550477 FAM90A5PA8MXJ8 464 aa18.31■□□□□ 0.52
SMARCD1-209ENST00000550477 H0YJX3 145 aa18.31■□□□□ 0.52
SMARCD1-209ENST00000550477 FGF16O43320 207 aa18.31■□□□□ 0.52
SMARCD1-209ENST00000550477 SULT1B1O43704 296 aa18.31■□□□□ 0.52
SMARCD1-209ENST00000550477 ATP5HO75947 161 aa18.31■□□□□ 0.52
SMARCD1-209ENST00000550477 FAM90A15PP0C7V4 464 aa18.31■□□□□ 0.52
SMARCD1-209ENST00000550477 FAM90A13PP0C7W8 464 aa18.31■□□□□ 0.52
SMARCD1-209ENST00000550477 FAM90A14PP0C7W9 464 aa18.31■□□□□ 0.52
SMARCD1-209ENST00000550477 FAM90A24PP0C7X0 464 aa18.31■□□□□ 0.52
SMARCD1-209ENST00000550477 HOXD3P31249 432 aaPredicted RBP18.31■□□□□ 0.52
SMARCD1-209ENST00000550477 MYCNOSP40205 109 aa18.31■□□□□ 0.52
SMARCD1-209ENST00000550477 RPL23AP62750 156 aaKnown RBP18.31■□□□□ 0.52
SMARCD1-209ENST00000550477 SLC25A30Q5SVS4 291 aa18.31■□□□□ 0.52
SMARCD1-209ENST00000550477 SLC16A12Q6ZSM3 486 aa18.31■□□□□ 0.52
SMARCD1-209ENST00000550477 ZNF329Q86UD4 541 aa18.31■□□□□ 0.52
SMARCD1-209ENST00000550477 FOXRED2Q8IWF2 684 aa18.31■□□□□ 0.52
SMARCD1-209ENST00000550477 OR8H3Q8N146 312 aa18.31■□□□□ 0.52
SMARCD1-209ENST00000550477 OR51T1Q8NGJ9 327 aa18.31■□□□□ 0.52
SMARCD1-209ENST00000550477 RNF166Q96A37 237 aaPredicted RBP18.31■□□□□ 0.52
SMARCD1-209ENST00000550477 CALYQ9NYX4 217 aa18.31■□□□□ 0.52
SMARCD1-209ENST00000550477 KCNJ3P48549 501 aa18.3■□□□□ 0.52
SMARCD1-209ENST00000550477 THBS3P49746 956 aa18.3■□□□□ 0.52
SMARCD1-209ENST00000550477 GP2P55259 537 aaKnown RBP18.3■□□□□ 0.52
SMARCD1-209ENST00000550477 MRPL28Q13084 256 aaKnown RBP18.3■□□□□ 0.52
SMARCD1-209ENST00000550477 OR10A7Q8NGE5 316 aa18.3■□□□□ 0.52
SMARCD1-209ENST00000550477 OR51A4Q8NGJ6 313 aa18.3■□□□□ 0.52
SMARCD1-209ENST00000550477 OR56B4Q8NH76 319 aa18.3■□□□□ 0.52
SMARCD1-209ENST00000550477 C4orf36Q96KX1 117 aa18.3■□□□□ 0.52
SMARCD1-209ENST00000550477 GPER1Q99527 375 aa18.3■□□□□ 0.52
SMARCD1-209ENST00000550477 B9D2Q9BPU9 175 aa18.3■□□□□ 0.52
SMARCD1-209ENST00000550477 GON7Q9BXV9 100 aa18.3■□□□□ 0.52
SMARCD1-209ENST00000550477 OR4C45A6NMZ5 311 aa18.29■□□□□ 0.52
SMARCD1-209ENST00000550477 HSPB6O14558 160 aa18.29■□□□□ 0.52
SMARCD1-209ENST00000550477 SNRPGP62308 76 aaKnown RBP18.29■□□□□ 0.52
SMARCD1-209ENST00000550477 CDK5R1Q15078 307 aa18.29■□□□□ 0.52
SMARCD1-209ENST00000550477 ZNF691Q5VV52 312 aa18.29■□□□□ 0.52
SMARCD1-209ENST00000550477 ELP2Q6IA86 826 aa18.29■□□□□ 0.52
SMARCD1-209ENST00000550477 DRAM1Q8N682 238 aa18.29■□□□□ 0.52
SMARCD1-209ENST00000550477 PXT1Q8NFP0 134 aa18.29■□□□□ 0.52
SMARCD1-209ENST00000550477 OR10X1Q8NGY0 326 aa18.29■□□□□ 0.52
SMARCD1-209ENST00000550477 PELI1Q96FA3 418 aa18.29■□□□□ 0.52
SMARCD1-209ENST00000550477 PPIL3Q9H2H8 161 aaKnown RBP18.29■□□□□ 0.52
SMARCD1-209ENST00000550477 FAM118AQ9NWS6 357 aa18.29■□□□□ 0.52
SMARCD1-209ENST00000550477 KIF25Q9UIL4 384 aa18.29■□□□□ 0.52
SMARCD1-209ENST00000550477 DHDHQ9UQ10 334 aa18.29■□□□□ 0.52
SMARCD1-209ENST00000550477 SAC3D1A6NKF1 404 aa18.28■□□□□ 0.52
SMARCD1-209ENST00000550477 TMEM212A6NML5 194 aa18.28■□□□□ 0.52
SMARCD1-209ENST00000550477 CIB2O75838 187 aa18.28■□□□□ 0.52
SMARCD1-209ENST00000550477 IL1AP01583 271 aa18.28■□□□□ 0.52
SMARCD1-209ENST00000550477 IL13RA2Q14627 380 aa18.28■□□□□ 0.52
SMARCD1-209ENST00000550477 OR2W3Q7Z3T1 314 aa18.28■□□□□ 0.52
SMARCD1-209ENST00000550477 SLC35E3Q7Z769 313 aa18.28■□□□□ 0.52
SMARCD1-209ENST00000550477 PARP16Q8N5Y8 322 aa18.28■□□□□ 0.52
SMARCD1-209ENST00000550477 C5orf56Q8N8D9 126 aa18.28■□□□□ 0.52
SMARCD1-209ENST00000550477 OR10AC1Q8NH08 325 aa18.28■□□□□ 0.52
SMARCD1-209ENST00000550477 OR5AK2Q8NH90 309 aa18.28■□□□□ 0.52
SMARCD1-209ENST00000550477 CNIH3Q8TBE1 160 aa18.28■□□□□ 0.52
SMARCD1-209ENST00000550477 TSEN15Q8WW01 171 aaKnown RBP18.28■□□□□ 0.52
SMARCD1-209ENST00000550477 WWC2-AS2Q96NR7 200 aa18.28■□□□□ 0.52
SMARCD1-209ENST00000550477 PSG11Q9UQ72 335 aa18.28■□□□□ 0.52
SMARCD1-209ENST00000550477 J3QRE1 110 aa18.27■□□□□ 0.52
SMARCD1-209ENST00000550477 CCDC159P0C7I6 412 aa18.27■□□□□ 0.52
SMARCD1-209ENST00000550477 CGB3P0DN86 165 aa18.27■□□□□ 0.52
SMARCD1-209ENST00000550477 CGB7P0DN87 165 aa18.27■□□□□ 0.52
SMARCD1-209ENST00000550477 ZP1P60852 638 aa18.27■□□□□ 0.52
SMARCD1-209ENST00000550477 GALEQ14376 348 aa18.27■□□□□ 0.52
SMARCD1-209ENST00000550477 HNF4GQ14541 408 aa18.27■□□□□ 0.52
SMARCD1-209ENST00000550477 RSU1Q15404 277 aa18.27■□□□□ 0.52
SMARCD1-209ENST00000550477 LTC4SQ16873 150 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms