RNA–Protein interactions for RNA: ENST00000550009.1

COX6A1-203, Transcript of cytochrome c oxidase subunit 6A1, humanhuman

TSL 2

Gene COX6A1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1-203ENST00000550009 HTR3BO95264 441 aa12.71□□□□□ -0.37
COX6A1-203ENST00000550009 OPN1MWP04001 364 aa12.71□□□□□ -0.37
COX6A1-203ENST00000550009 CSN2P05814 226 aa12.71□□□□□ -0.37
COX6A1-203ENST00000550009 GNAO1P09471 354 aa12.71□□□□□ -0.37
COX6A1-203ENST00000550009 CCDC159P0C7I6 412 aa12.71□□□□□ -0.37
COX6A1-203ENST00000550009 OPN1MW2P0DN77 364 aa12.71□□□□□ -0.37
COX6A1-203ENST00000550009 OPN1MW3P0DN78 364 aa12.71□□□□□ -0.37
COX6A1-203ENST00000550009 RAB3AP20336 220 aa12.71□□□□□ -0.37
COX6A1-203ENST00000550009 PTGFRP43088 359 aa12.71□□□□□ -0.37
COX6A1-203ENST00000550009 BDH1Q02338 343 aa12.71□□□□□ -0.37
COX6A1-203ENST00000550009 HLA-DRB5Q30154 266 aa12.71□□□□□ -0.37
COX6A1-203ENST00000550009 PAN3Q58A45 887 aaKnown RBP12.71□□□□□ -0.37
COX6A1-203ENST00000550009 OXLD1Q5BKU9 147 aa12.71□□□□□ -0.37
COX6A1-203ENST00000550009 RSBN1Q5VWQ0 802 aaPredicted RBP12.71□□□□□ -0.37
COX6A1-203ENST00000550009 OR51T1Q8NGJ9 327 aa12.71□□□□□ -0.37
COX6A1-203ENST00000550009 MRGPRDQ8TDS7 321 aa12.71□□□□□ -0.37
COX6A1-203ENST00000550009 CYGBQ8WWM9 190 aa12.71□□□□□ -0.37
COX6A1-203ENST00000550009 GPER1Q99527 375 aa12.71□□□□□ -0.37
COX6A1-203ENST00000550009 PRSS22Q9GZN4 317 aa12.71□□□□□ -0.37
COX6A1-203ENST00000550009 INPP5EQ9NRR6 644 aa12.71□□□□□ -0.37
COX6A1-203ENST00000550009 TAS2R3Q9NYW6 316 aa12.71□□□□□ -0.37
COX6A1-203ENST00000550009 DPM3Q9P2X0 92 aa12.71□□□□□ -0.37
COX6A1-203ENST00000550009 TRAV8-7A0A075B6U6 113 aa12.7□□□□□ -0.38
COX6A1-203ENST00000550009 A0A1W2PPK0 400 aa12.7□□□□□ -0.38
COX6A1-203ENST00000550009 ANKRD65E5RJM6 399 aa12.7□□□□□ -0.38
COX6A1-203ENST00000550009 BUB1B-PAK6H3BSN5 160 aa12.7□□□□□ -0.38
COX6A1-203ENST00000550009 EBAG9O00559 213 aa12.7□□□□□ -0.38
COX6A1-203ENST00000550009 ALX3O95076 343 aa12.7□□□□□ -0.38
COX6A1-203ENST00000550009 CD34P28906 385 aa12.7□□□□□ -0.38
COX6A1-203ENST00000550009 SSTR5P35346 364 aa12.7□□□□□ -0.38
COX6A1-203ENST00000550009 VDAC2P45880 294 aaPredicted RBP12.7□□□□□ -0.38
COX6A1-203ENST00000550009 MTNR1BP49286 362 aa12.7□□□□□ -0.38
COX6A1-203ENST00000550009 RPS11P62280 158 aaKnown RBP eCLIP12.7□□□□□ -0.38
COX6A1-203ENST00000550009 ABCA11PQ4W5N1 156 aa12.7□□□□□ -0.38
COX6A1-203ENST00000550009 KLHL22Q53GT1 634 aa12.7□□□□□ -0.38
COX6A1-203ENST00000550009 TPTE2P1Q5T6R2 138 aa12.7□□□□□ -0.38
COX6A1-203ENST00000550009 SAMD5Q5TGI4 173 aa12.7□□□□□ -0.38
COX6A1-203ENST00000550009 ELP2Q6IA86 826 aa12.7□□□□□ -0.38
COX6A1-203ENST00000550009 C5orf24Q7Z6I8 188 aa12.7□□□□□ -0.38
COX6A1-203ENST00000550009 ZNF485Q8NCK3 441 aa12.7□□□□□ -0.38
COX6A1-203ENST00000550009 PXT1Q8NFP0 134 aa12.7□□□□□ -0.38
COX6A1-203ENST00000550009 MRPL48Q96GC5 212 aaKnown RBP12.7□□□□□ -0.38
COX6A1-203ENST00000550009 GAL3ST2Q9H3Q3 398 aa12.7□□□□□ -0.38
COX6A1-203ENST00000550009 CALYQ9NYX4 217 aa12.7□□□□□ -0.38
COX6A1-203ENST00000550009 ING4Q9UNL4 249 aa12.7□□□□□ -0.38
COX6A1-203ENST00000550009 MEIKINA0A087WXM9 373 aa12.69□□□□□ -0.38
COX6A1-203ENST00000550009 KBTBD11-OT1A0A1B0GTJ5 212 aa12.69□□□□□ -0.38
COX6A1-203ENST00000550009 OGG1O15527 345 aa12.69□□□□□ -0.38
COX6A1-203ENST00000550009 LPLP06858 475 aa12.69□□□□□ -0.38
COX6A1-203ENST00000550009 GNG10P50151 68 aa12.69□□□□□ -0.38
COX6A1-203ENST00000550009 ADARB1P78563 741 aaKnown RBP12.69□□□□□ -0.38
COX6A1-203ENST00000550009 ARSJQ5FYB0 599 aaPredicted RBP12.69□□□□□ -0.38
COX6A1-203ENST00000550009 RPL22L1Q6P5R6 122 aaKnown RBP12.69□□□□□ -0.38
COX6A1-203ENST00000550009 ASCL4Q6XD76 172 aa12.69□□□□□ -0.38
COX6A1-203ENST00000550009 GPR148Q8TDV2 347 aa12.69□□□□□ -0.38
COX6A1-203ENST00000550009 GGHQ92820 318 aa12.69□□□□□ -0.38
COX6A1-203ENST00000550009 TMEM106AQ96A25 262 aa12.69□□□□□ -0.38
COX6A1-203ENST00000550009 SLC25A33Q9BSK2 321 aa12.69□□□□□ -0.38
COX6A1-203ENST00000550009 COL7A1Q02388 2944 aa12.68□□□□□ -0.38
COX6A1-203ENST00000550009 ZNF729A6NN14 1252 aaPredicted RBP12.68□□□□□ -0.38
COX6A1-203ENST00000550009 GEMIN2O14893 280 aaKnown RBP12.68□□□□□ -0.38
COX6A1-203ENST00000550009 XPNPEP2O43895 674 aa12.68□□□□□ -0.38
COX6A1-203ENST00000550009 SERPINA2P20848 420 aa12.68□□□□□ -0.38
COX6A1-203ENST00000550009 RSU1Q15404 277 aa12.68□□□□□ -0.38
COX6A1-203ENST00000550009 DDI2Q5TDH0 399 aa12.68□□□□□ -0.38
COX6A1-203ENST00000550009 DMKNQ6E0U4 476 aaPredicted RBP12.68□□□□□ -0.38
COX6A1-203ENST00000550009 C11orf88Q6PI97 169 aa12.68□□□□□ -0.38
COX6A1-203ENST00000550009 SUMF2Q8NBJ7 301 aa12.68□□□□□ -0.38
COX6A1-203ENST00000550009 CHST4Q8NCG5 386 aa12.68□□□□□ -0.38
COX6A1-203ENST00000550009 ZNF555Q8NEP9 628 aa12.68□□□□□ -0.38
COX6A1-203ENST00000550009 Q8NFD4 153 aa12.68□□□□□ -0.38
COX6A1-203ENST00000550009 OR4D6Q8NGJ1 314 aa12.68□□□□□ -0.38
COX6A1-203ENST00000550009 ZNF596Q8TC21 504 aa12.68□□□□□ -0.38
COX6A1-203ENST00000550009 GHSRQ92847 366 aa12.68□□□□□ -0.38
COX6A1-203ENST00000550009 R3HDM4Q96D70 268 aa12.68□□□□□ -0.38
COX6A1-203ENST00000550009 PGLYRP3Q96LB9 341 aa12.68□□□□□ -0.38
COX6A1-203ENST00000550009 IDI2-AS1Q9NZ38 188 aa12.68□□□□□ -0.38
COX6A1-203ENST00000550009 PITPNC1Q9UKF7 332 aa12.68□□□□□ -0.38
COX6A1-203ENST00000550009 PSG11Q9UQ72 335 aa12.68□□□□□ -0.38
COX6A1-203ENST00000550009 DNAH9Q9NYC9 4486 aa12.68□□□□□ -0.38
COX6A1-203ENST00000550009 A0A087X0M5 115 aa12.67□□□□□ -0.38
COX6A1-203ENST00000550009 TRBV5-5A0A0J9YX44 114 aa12.67□□□□□ -0.38
COX6A1-203ENST00000550009 A0A1B0GX30 115 aa12.67□□□□□ -0.38
COX6A1-203ENST00000550009 TOR1AO14656 332 aa12.67□□□□□ -0.38
COX6A1-203ENST00000550009 IGFBP3P17936 291 aaPredicted RBP12.67□□□□□ -0.38
COX6A1-203ENST00000550009 VHLP40337 213 aa12.67□□□□□ -0.38
COX6A1-203ENST00000550009 INSL4Q14641 139 aa12.67□□□□□ -0.38
COX6A1-203ENST00000550009 OR52W1Q6IF63 320 aa12.67□□□□□ -0.38
COX6A1-203ENST00000550009 RTN4RL2Q86UN3 420 aa12.67□□□□□ -0.38
COX6A1-203ENST00000550009 OR5AU1Q8NGC0 362 aa12.67□□□□□ -0.38
COX6A1-203ENST00000550009 CCDC107Q8WV48 283 aa12.67□□□□□ -0.38
COX6A1-203ENST00000550009 STMN2Q93045 179 aa12.67□□□□□ -0.38
COX6A1-203ENST00000550009 SMIM19Q96E16 107 aa12.67□□□□□ -0.38
COX6A1-203ENST00000550009 RBM14Q96PK6 669 aaKnown RBP12.67□□□□□ -0.38
COX6A1-203ENST00000550009 BABAM2Q9NXR7 383 aa12.67□□□□□ -0.38
COX6A1-203ENST00000550009 DIMT1Q9UNQ2 313 aaKnown RBP12.67□□□□□ -0.38
COX6A1-203ENST00000550009 ST3GAL6Q9Y274 331 aa12.67□□□□□ -0.38
COX6A1-203ENST00000550009 PCDHGB5Q9Y5G0 923 aa12.67□□□□□ -0.38
COX6A1-203ENST00000550009 IGHV3-43A0A0B4J1X8 118 aa12.66□□□□□ -0.38
COX6A1-203ENST00000550009 A0A1W2PPI3 338 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms