RNA–Protein interactions for RNA: ENST00000549970.5

VPS29-207, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 818 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-207ENST00000549970 VDAC2P45880 294 aaPredicted RBP13.1□□□□□ -0.31
VPS29-207ENST00000549970 OR3A4PP47883 348 aa13.1□□□□□ -0.31
VPS29-207ENST00000549970 RBM39Q14498 530 aaKnown RBP13.1□□□□□ -0.31
VPS29-207ENST00000549970 IL13RA2Q14627 380 aa13.1□□□□□ -0.31
VPS29-207ENST00000549970 PIGYQ3MUY2 71 aa13.1□□□□□ -0.31
VPS29-207ENST00000549970 UTF1Q5T230 341 aa13.1□□□□□ -0.31
VPS29-207ENST00000549970 OR51T1Q8NGJ9 327 aa13.1□□□□□ -0.31
VPS29-207ENST00000549970 KIF25Q9UIL4 384 aa13.1□□□□□ -0.31
VPS29-207ENST00000549970 SIRT4Q9Y6E7 314 aaPredicted RBP13.1□□□□□ -0.31
VPS29-207ENST00000549970 MEIKINA0A087WXM9 373 aa13.09□□□□□ -0.31
VPS29-207ENST00000549970 IRGMA1A4Y4 181 aa13.09□□□□□ -0.31
VPS29-207ENST00000549970 H3BUI4 141 aa13.09□□□□□ -0.31
VPS29-207ENST00000549970 CDRT1O95170 752 aa13.09□□□□□ -0.31
VPS29-207ENST00000549970 OPN1MWP04001 364 aa13.09□□□□□ -0.31
VPS29-207ENST00000549970 OPN1MW2P0DN77 364 aa13.09□□□□□ -0.31
VPS29-207ENST00000549970 OPN1MW3P0DN78 364 aa13.09□□□□□ -0.31
VPS29-207ENST00000549970 CD34P28906 385 aa13.09□□□□□ -0.31
VPS29-207ENST00000549970 BRS3P32247 399 aa13.09□□□□□ -0.31
VPS29-207ENST00000549970 ARHGDIBP52566 201 aa13.09□□□□□ -0.31
VPS29-207ENST00000549970 PPP3R1P63098 170 aa13.09□□□□□ -0.31
VPS29-207ENST00000549970 HLA-DRB5Q30154 266 aa13.09□□□□□ -0.31
VPS29-207ENST00000549970 DDI2Q5TDH0 399 aa13.09□□□□□ -0.31
VPS29-207ENST00000549970 OR13A1Q8NGR1 328 aa13.09□□□□□ -0.31
VPS29-207ENST00000549970 OR13C5Q8NGS8 318 aa13.09□□□□□ -0.31
VPS29-207ENST00000549970 ORAI1Q96D31 301 aa13.09□□□□□ -0.31
VPS29-207ENST00000549970 CLEC2DQ9UHP7 191 aa13.09□□□□□ -0.31
VPS29-207ENST00000549970 DIMT1Q9UNQ2 313 aaKnown RBP13.09□□□□□ -0.31
VPS29-207ENST00000549970 TGP01266 2768 aa13.09□□□□□ -0.31
VPS29-207ENST00000549970 KBTBD11-OT1A0A1B0GTJ5 212 aa13.08□□□□□ -0.32
VPS29-207ENST00000549970 BUB1B-PAK6H3BSN5 160 aa13.08□□□□□ -0.32
VPS29-207ENST00000549970 LALBAP00709 142 aa13.08□□□□□ -0.32
VPS29-207ENST00000549970 ALDOBP05062 364 aa13.08□□□□□ -0.32
VPS29-207ENST00000549970 CEACAM3P40198 252 aa13.08□□□□□ -0.32
VPS29-207ENST00000549970 PRRX1P54821 245 aa13.08□□□□□ -0.32
VPS29-207ENST00000549970 FBLN7Q53RD9 439 aa13.08□□□□□ -0.32
VPS29-207ENST00000549970 TPTE2P1Q5T6R2 138 aa13.08□□□□□ -0.32
VPS29-207ENST00000549970 TTC23Q5W5X9 447 aa13.08□□□□□ -0.32
VPS29-207ENST00000549970 ZNF565Q8N9K5 539 aa13.08□□□□□ -0.32
VPS29-207ENST00000549970 PLPPR1Q8TBJ4 325 aa13.08□□□□□ -0.32
VPS29-207ENST00000549970 WIPF2Q8TF74 440 aaPredicted RBP13.08□□□□□ -0.32
VPS29-207ENST00000549970 CAPSLQ8WWF8 208 aa13.08□□□□□ -0.32
VPS29-207ENST00000549970 CREB3L1Q96BA8 519 aa13.08□□□□□ -0.32
VPS29-207ENST00000549970 SMIM19Q96E16 107 aa13.08□□□□□ -0.32
VPS29-207ENST00000549970 KIRREL1Q96J84 757 aa13.08□□□□□ -0.32
VPS29-207ENST00000549970 CITED2Q99967 270 aaPredicted RBP13.08□□□□□ -0.32
VPS29-207ENST00000549970 SLC25A33Q9BSK2 321 aa13.08□□□□□ -0.32
VPS29-207ENST00000549970 BARHL1Q9BZE3 327 aa13.08□□□□□ -0.32
VPS29-207ENST00000549970 WNT10AQ9GZT5 417 aa13.08□□□□□ -0.32
VPS29-207ENST00000549970 TMEM138Q9NPI0 162 aa13.08□□□□□ -0.32
VPS29-207ENST00000549970 BABAM2Q9NXR7 383 aa13.08□□□□□ -0.32
VPS29-207ENST00000549970 CALYQ9NYX4 217 aa13.08□□□□□ -0.32
VPS29-207ENST00000549970 ING4Q9UNL4 249 aa13.08□□□□□ -0.32
VPS29-207ENST00000549970 ZNF281Q9Y2X9 895 aa13.08□□□□□ -0.32
VPS29-207ENST00000549970 EXOSC1Q9Y3B2 195 aaKnown RBP13.08□□□□□ -0.32
VPS29-207ENST00000549970 PLXNB1O43157 2135 aa13.07□□□□□ -0.32
VPS29-207ENST00000549970 A0A087X0M5 115 aa13.07□□□□□ -0.32
VPS29-207ENST00000549970 A0A1B0GX30 115 aa13.07□□□□□ -0.32
VPS29-207ENST00000549970 G3V4G9 280 aa13.07□□□□□ -0.32
VPS29-207ENST00000549970 OGG1O15527 345 aa13.07□□□□□ -0.32
VPS29-207ENST00000549970 IGHV3-7P01780 117 aa13.07□□□□□ -0.32
VPS29-207ENST00000549970 C21orf33P30042 268 aaPredicted RBP13.07□□□□□ -0.32
VPS29-207ENST00000549970 BDKRB2P30411 391 aa13.07□□□□□ -0.32
VPS29-207ENST00000549970 ZNF93P35789 620 aaPredicted RBP13.07□□□□□ -0.32
VPS29-207ENST00000549970 LTC4SQ16873 150 aa13.07□□□□□ -0.32
VPS29-207ENST00000549970 RSBN1Q5VWQ0 802 aaPredicted RBP13.07□□□□□ -0.32
VPS29-207ENST00000549970 ASCL4Q6XD76 172 aa13.07□□□□□ -0.32
VPS29-207ENST00000549970 C16orf82Q7Z2V1 217 aa13.07□□□□□ -0.32
VPS29-207ENST00000549970 ZFP41Q8N8Y5 198 aa13.07□□□□□ -0.32
VPS29-207ENST00000549970 SETD9Q8NE22 299 aa13.07□□□□□ -0.32
VPS29-207ENST00000549970 OR9G1Q8NH87 305 aa13.07□□□□□ -0.32
VPS29-207ENST00000549970 MRGPRDQ8TDS7 321 aa13.07□□□□□ -0.32
VPS29-207ENST00000549970 TMEM80Q96HE8 168 aa13.07□□□□□ -0.32
VPS29-207ENST00000549970 AKR1E2Q96JD6 320 aa13.07□□□□□ -0.32
VPS29-207ENST00000549970 OCSTAMPQ9BR26 566 aa13.07□□□□□ -0.32
VPS29-207ENST00000549970 METTL9Q9H1A3 318 aa13.07□□□□□ -0.32
VPS29-207ENST00000549970 LIN7BQ9HAP6 207 aa13.07□□□□□ -0.32
VPS29-207ENST00000549970 CHCHD3Q9NX63 227 aaKnown RBP13.07□□□□□ -0.32
VPS29-207ENST00000549970 ZNF581Q9P0T4 197 aa13.07□□□□□ -0.32
VPS29-207ENST00000549970 ST3GAL6Q9Y274 331 aa13.07□□□□□ -0.32
VPS29-207ENST00000549970 TRAV39A0A0B4J263 110 aa13.06□□□□□ -0.32
VPS29-207ENST00000549970 LY6LH3BQJ8 138 aa13.06□□□□□ -0.32
VPS29-207ENST00000549970 OR7C1O76099 320 aaPredicted RBP13.06□□□□□ -0.32
VPS29-207ENST00000549970 IL1AP01583 271 aa13.06□□□□□ -0.32
VPS29-207ENST00000549970 CSTBP04080 98 aaKnown RBP13.06□□□□□ -0.32
VPS29-207ENST00000549970 CGB3P0DN86 165 aa13.06□□□□□ -0.32
VPS29-207ENST00000549970 CGB7P0DN87 165 aa13.06□□□□□ -0.32
VPS29-207ENST00000549970 SERPINA2P20848 420 aa13.06□□□□□ -0.32
VPS29-207ENST00000549970 MED21Q13503 144 aa13.06□□□□□ -0.32
VPS29-207ENST00000549970 RIPK1Q13546 671 aa13.06□□□□□ -0.32
VPS29-207ENST00000549970 RCN1Q15293 331 aa13.06□□□□□ -0.32
VPS29-207ENST00000549970 ABCA11PQ4W5N1 156 aa13.06□□□□□ -0.32
VPS29-207ENST00000549970 NDUFA11Q86Y39 141 aa13.06□□□□□ -0.32
VPS29-207ENST00000549970 OSR2Q8N2R0 312 aa13.06□□□□□ -0.32
VPS29-207ENST00000549970 DHRSXQ8N5I4 330 aa13.06□□□□□ -0.32
VPS29-207ENST00000549970 SUMF2Q8NBJ7 301 aa13.06□□□□□ -0.32
VPS29-207ENST00000549970 Q8NFD4 153 aa13.06□□□□□ -0.32
VPS29-207ENST00000549970 RFESDQ8TAC1 157 aa13.06□□□□□ -0.32
VPS29-207ENST00000549970 GHSRQ92847 366 aa13.06□□□□□ -0.32
VPS29-207ENST00000549970 LEAP2Q969E1 77 aa13.06□□□□□ -0.32
VPS29-207ENST00000549970 R3HDM4Q96D70 268 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms