RNA–Protein interactions for RNA: ENST00000549580.1

SNRPF-202, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 757 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-202ENST00000549580 ATP6V1G2O95670 118 aa2.37□□□□□ -2.03
SNRPF-202ENST00000549580 CXorf1O96002 111 aa2.37□□□□□ -2.03
SNRPF-202ENST00000549580 CA2P00918 260 aa2.37□□□□□ -2.03
SNRPF-202ENST00000549580 IGHV1-46P01743 117 aa2.37□□□□□ -2.03
SNRPF-202ENST00000549580 IMPA1P29218 277 aa2.37□□□□□ -2.03
SNRPF-202ENST00000549580 PYCR1P32322 319 aa2.37□□□□□ -2.03
SNRPF-202ENST00000549580 TGFBR1P36897 503 aa2.37□□□□□ -2.03
SNRPF-202ENST00000549580 PMELP40967 661 aa2.37□□□□□ -2.03
SNRPF-202ENST00000549580 PSMD7P51665 324 aa2.37□□□□□ -2.03
SNRPF-202ENST00000549580 UBE2IP63279 158 aaKnown RBP2.37□□□□□ -2.03
SNRPF-202ENST00000549580 PTRHD1Q6GMV3 140 aaKnown RBP2.37□□□□□ -2.03
SNRPF-202ENST00000549580 SLC25A34Q6PIV7 304 aa2.37□□□□□ -2.03
SNRPF-202ENST00000549580 NEGR1Q7Z3B1 354 aa2.37□□□□□ -2.03
SNRPF-202ENST00000549580 HMGN2P46Q86SG4 172 aa2.37□□□□□ -2.03
SNRPF-202ENST00000549580 ZNF615Q8N8J6 731 aa2.37□□□□□ -2.03
SNRPF-202ENST00000549580 GATD1Q8NB37 220 aa2.37□□□□□ -2.03
SNRPF-202ENST00000549580 KLF14Q8TD94 323 aaPredicted RBP2.37□□□□□ -2.03
SNRPF-202ENST00000549580 LINC00477Q96M19 166 aa2.37□□□□□ -2.03
SNRPF-202ENST00000549580 THTPAQ9BU02 230 aa2.37□□□□□ -2.03
SNRPF-202ENST00000549580 SLC19A3Q9BZV2 496 aa2.37□□□□□ -2.03
SNRPF-202ENST00000549580 TAC3Q9UHF0 121 aa2.37□□□□□ -2.03
SNRPF-202ENST00000549580 NUP153P49790 1475 aaKnown RBP2.37□□□□□ -2.03
SNRPF-202ENST00000549580 KIAA1671Q9BY89 1806 aa2.36□□□□□ -2.03
SNRPF-202ENST00000549580 IGHV3OR16-8A0A075B7F1 116 aa2.36□□□□□ -2.03
SNRPF-202ENST00000549580 GMNCA6NCL1 334 aa2.36□□□□□ -2.03
SNRPF-202ENST00000549580 C16orf90A8MZG2 172 aa2.36□□□□□ -2.03
SNRPF-202ENST00000549580 FGF16O43320 207 aa2.36□□□□□ -2.03
SNRPF-202ENST00000549580 ATP8B1O43520 1251 aa2.36□□□□□ -2.03
SNRPF-202ENST00000549580 CRTAPO75718 401 aaPredicted RBP2.36□□□□□ -2.03
SNRPF-202ENST00000549580 RBBP9O75884 186 aa2.36□□□□□ -2.03
SNRPF-202ENST00000549580 HLA-AP01891 365 aaKnown RBP2.36□□□□□ -2.03
SNRPF-202ENST00000549580 SOD3P08294 240 aa2.36□□□□□ -2.03
SNRPF-202ENST00000549580 OR5AC1P0C628 307 aa2.36□□□□□ -2.03
SNRPF-202ENST00000549580 SLC6A1P30531 599 aa2.36□□□□□ -2.03
SNRPF-202ENST00000549580 RCVRNP35243 200 aa2.36□□□□□ -2.03
SNRPF-202ENST00000549580 MAGEA2P43356 314 aa2.36□□□□□ -2.03
SNRPF-202ENST00000549580 IDH2P48735 452 aaKnown RBP2.36□□□□□ -2.03
SNRPF-202ENST00000549580 TGM4P49221 684 aa2.36□□□□□ -2.03
SNRPF-202ENST00000549580 EIF4EBP2Q13542 120 aaPredicted RBP2.36□□□□□ -2.03
SNRPF-202ENST00000549580 GOLGA7BQ2TAP0 167 aa2.36□□□□□ -2.03
SNRPF-202ENST00000549580 DNAL1Q4LDG9 190 aa2.36□□□□□ -2.03
SNRPF-202ENST00000549580 NXNL2Q5VZ03 156 aa2.36□□□□□ -2.03
SNRPF-202ENST00000549580 DRAM2Q6UX65 266 aa2.36□□□□□ -2.03
SNRPF-202ENST00000549580 OR8A1Q8NGG7 326 aa2.36□□□□□ -2.03
SNRPF-202ENST00000549580 DTD1Q8TEA8 209 aa2.36□□□□□ -2.03
SNRPF-202ENST00000549580 DEDD2Q8WXF8 326 aa2.36□□□□□ -2.03
SNRPF-202ENST00000549580 CMTM5Q96DZ9 223 aa2.36□□□□□ -2.03
SNRPF-202ENST00000549580 PPP1R36Q96LQ0 422 aa2.36□□□□□ -2.03
SNRPF-202ENST00000549580 RBP7Q96R05 134 aa2.36□□□□□ -2.03
SNRPF-202ENST00000549580 LINC01587Q99440 93 aa2.36□□□□□ -2.03
SNRPF-202ENST00000549580 GPR22Q99680 433 aa2.36□□□□□ -2.03
SNRPF-202ENST00000549580 OR51E2Q9H255 320 aa2.36□□□□□ -2.03
SNRPF-202ENST00000549580 FBXL15Q9H469 300 aa2.36□□□□□ -2.03
SNRPF-202ENST00000549580 FAM60AQ9NP50 221 aa2.36□□□□□ -2.03
SNRPF-202ENST00000549580 SPANXB1Q9NS25 103 aaPredicted RBP2.36□□□□□ -2.03
SNRPF-202ENST00000549580 TMEM38BQ9NVV0 291 aa2.36□□□□□ -2.03
SNRPF-202ENST00000549580 DMAC2Q9NW81 257 aa2.36□□□□□ -2.03
SNRPF-202ENST00000549580 USE1Q9NZ43 259 aa2.36□□□□□ -2.03
SNRPF-202ENST00000549580 C14orf166Q9Y224 244 aaKnown RBP2.36□□□□□ -2.03
SNRPF-202ENST00000549580 ZNF706Q9Y5V0 76 aaPredicted RBP2.36□□□□□ -2.03
SNRPF-202ENST00000549580 RPRD2Q5VT52 1461 aaKnown RBP2.36□□□□□ -2.03
SNRPF-202ENST00000549580 VWA8A3KMH1 1905 aa2.35□□□□□ -2.03
SNRPF-202ENST00000549580 LOXHD1Q8IVV2 1947 aa2.35□□□□□ -2.03
SNRPF-202ENST00000549580 K7EPK0 472 aa2.35□□□□□ -2.03
SNRPF-202ENST00000549580 HPGDSO60760 199 aa2.35□□□□□ -2.03
SNRPF-202ENST00000549580 CDRT1O95170 752 aa2.35□□□□□ -2.03
SNRPF-202ENST00000549580 KLHL2O95198 593 aa2.35□□□□□ -2.03
SNRPF-202ENST00000549580 SOX14O95416 240 aa2.35□□□□□ -2.03
SNRPF-202ENST00000549580 HIST1H1CP16403 213 aaKnown RBP2.35□□□□□ -2.03
SNRPF-202ENST00000549580 ACTR1BP42025 376 aa2.35□□□□□ -2.03
SNRPF-202ENST00000549580 CDC34P49427 236 aaPredicted RBP2.35□□□□□ -2.03
SNRPF-202ENST00000549580 C1QTNF8P60827 252 aa2.35□□□□□ -2.03
SNRPF-202ENST00000549580 FAM3AP98173 230 aa2.35□□□□□ -2.03
SNRPF-202ENST00000549580 TMEM241Q24JQ0 296 aa2.35□□□□□ -2.03
SNRPF-202ENST00000549580 CLEC12BQ2HXU8 276 aa2.35□□□□□ -2.03
SNRPF-202ENST00000549580 MRPL2Q5T653 305 aaKnown RBP2.35□□□□□ -2.03
SNRPF-202ENST00000549580 TMEM215Q68D42 235 aa2.35□□□□□ -2.03
SNRPF-202ENST00000549580 TTC33Q6PID6 262 aaPredicted RBP2.35□□□□□ -2.03
SNRPF-202ENST00000549580 C16orf47Q6ZP98 133 aaPredicted RBP2.35□□□□□ -2.03
SNRPF-202ENST00000549580 OLIG3Q7RTU3 272 aa2.35□□□□□ -2.03
SNRPF-202ENST00000549580 BLIDQ8IZY5 108 aa2.35□□□□□ -2.03
SNRPF-202ENST00000549580 SLC25A45Q8N413 288 aa2.35□□□□□ -2.03
SNRPF-202ENST00000549580 TMEM251Q8N6I4 163 aa2.35□□□□□ -2.03
SNRPF-202ENST00000549580 OR4P4Q8NGL7 312 aa2.35□□□□□ -2.03
SNRPF-202ENST00000549580 SMIM12Q96EX1 92 aa2.35□□□□□ -2.03
SNRPF-202ENST00000549580 ULBP1Q9BZM6 244 aa2.35□□□□□ -2.03
SNRPF-202ENST00000549580 METTL9Q9H1A3 318 aa2.35□□□□□ -2.03
SNRPF-202ENST00000549580 METTL17Q9H7H0 456 aaPredicted RBP2.35□□□□□ -2.03
SNRPF-202ENST00000549580 NAGKQ9UJ70 344 aa2.35□□□□□ -2.03
SNRPF-202ENST00000549580 IGLV2-18A0A075B6J9 118 aa2.34□□□□□ -2.03
SNRPF-202ENST00000549580 IGHV2-26A0A0B4J1V2 119 aa2.34□□□□□ -2.03
SNRPF-202ENST00000549580 DAPL1A0PJW8 107 aa2.34□□□□□ -2.03
SNRPF-202ENST00000549580 IZUMO1RA6ND01 250 aa2.34□□□□□ -2.03
SNRPF-202ENST00000549580 ZNF98A6NK75 572 aa2.34□□□□□ -2.03
SNRPF-202ENST00000549580 CCRL2O00421 344 aa2.34□□□□□ -2.03
SNRPF-202ENST00000549580 CNMDO75829 334 aa2.34□□□□□ -2.03
SNRPF-202ENST00000549580 DEXIO95424 95 aa2.34□□□□□ -2.03
SNRPF-202ENST00000549580 PSMG1O95456 288 aa2.34□□□□□ -2.03
SNRPF-202ENST00000549580 S100A6P06703 90 aa2.34□□□□□ -2.03
SNRPF-202ENST00000549580 KRT7P08729 469 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms