RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 FOXL2NBQ6ZUU3 175 aa11.85□□□□□ -0.51
HDAC7-228ENST00000548938 SLC35E3Q7Z769 313 aa11.85□□□□□ -0.51
HDAC7-228ENST00000548938 TBC1D26Q86UD7 250 aa11.85□□□□□ -0.51
HDAC7-228ENST00000548938 ZNF695Q8IW36 515 aa11.85□□□□□ -0.51
HDAC7-228ENST00000548938 GTF3AQ92664 365 aaKnown RBP11.85□□□□□ -0.51
HDAC7-228ENST00000548938 SLC25A31Q9H0C2 315 aa11.85□□□□□ -0.51
HDAC7-228ENST00000548938 CEP192Q8TEP8 1941 aa11.84□□□□□ -0.51
HDAC7-228ENST00000548938 ELOA3CA0A087WX78 387 aaPredicted RBP11.84□□□□□ -0.51
HDAC7-228ENST00000548938 NR2C1P13056 603 aa11.84□□□□□ -0.51
HDAC7-228ENST00000548938 GNRHRP30968 328 aa11.84□□□□□ -0.51
HDAC7-228ENST00000548938 SSTP61278 116 aa11.84□□□□□ -0.51
HDAC7-228ENST00000548938 HLA-DRB3P79483 266 aa11.84□□□□□ -0.51
HDAC7-228ENST00000548938 CNN3Q15417 329 aaKnown RBP11.84□□□□□ -0.51
HDAC7-228ENST00000548938 SSX9Q7RTT3 188 aa11.84□□□□□ -0.51
HDAC7-228ENST00000548938 CMTM1Q8IZ96 169 aa11.84□□□□□ -0.51
HDAC7-228ENST00000548938 TMEM123Q8N131 208 aa11.84□□□□□ -0.51
HDAC7-228ENST00000548938 SLC25A45Q8N413 288 aa11.84□□□□□ -0.51
HDAC7-228ENST00000548938 FAM210BQ96KR6 192 aa11.84□□□□□ -0.51
HDAC7-228ENST00000548938 PDCD6O75340 191 aa11.84□□□□□ -0.51
HDAC7-228ENST00000548938 PTBP3O95758 552 aaKnown RBP11.84□□□□□ -0.51
HDAC7-228ENST00000548938 H3F3AP84243 136 aa11.84□□□□□ -0.51
HDAC7-228ENST00000548938 NKAIN1Q4KMZ8 207 aa11.84□□□□□ -0.51
HDAC7-228ENST00000548938 RHBDD2Q6NTF9 364 aa11.84□□□□□ -0.51
HDAC7-228ENST00000548938 OR5L2Q8NGL0 311 aa11.84□□□□□ -0.51
HDAC7-228ENST00000548938 OR13D1Q8NGV5 346 aa11.84□□□□□ -0.51
HDAC7-228ENST00000548938 NAT6Q93015 286 aa11.84□□□□□ -0.51
HDAC7-228ENST00000548938 GNPNAT1Q96EK6 184 aaPredicted RBP11.84□□□□□ -0.51
HDAC7-228ENST00000548938 ZNF442Q9H7R0 627 aa11.84□□□□□ -0.51
HDAC7-228ENST00000548938 CACNA1EQ15878 2313 aa11.83□□□□□ -0.52
HDAC7-228ENST00000548938 IGLV3-12A0A075B6K2 115 aa11.83□□□□□ -0.52
HDAC7-228ENST00000548938 CRYGSP22914 178 aa11.83□□□□□ -0.52
HDAC7-228ENST00000548938 DDTP30046 118 aa11.83□□□□□ -0.52
HDAC7-228ENST00000548938 SRPXP78539 464 aa11.83□□□□□ -0.52
HDAC7-228ENST00000548938 SPIN3Q5JUX0 258 aa11.83□□□□□ -0.52
HDAC7-228ENST00000548938 ASCL4Q6XD76 172 aa11.83□□□□□ -0.52
HDAC7-228ENST00000548938 SELENOHQ8IZQ5 122 aaKnown RBP11.83□□□□□ -0.52
HDAC7-228ENST00000548938 CARFQ8N187 725 aa11.83□□□□□ -0.52
HDAC7-228ENST00000548938 CPNE4Q96A23 557 aaPredicted RBP11.83□□□□□ -0.52
HDAC7-228ENST00000548938 RBMXL1Q96E39 390 aaKnown RBP11.83□□□□□ -0.52
HDAC7-228ENST00000548938 ULBP2Q9BZM5 246 aa11.83□□□□□ -0.52
HDAC7-228ENST00000548938 SLC7A10Q9NS82 523 aa11.83□□□□□ -0.52
HDAC7-228ENST00000548938 P4HTMQ9NXG6 502 aa11.83□□□□□ -0.52
HDAC7-228ENST00000548938 GNG13Q9P2W3 67 aa11.83□□□□□ -0.52
HDAC7-228ENST00000548938 LOC102723971A0A1B0GUV8 181 aa11.83□□□□□ -0.52
HDAC7-228ENST00000548938 NPIPA2E9PIF3 369 aa11.83□□□□□ -0.52
HDAC7-228ENST00000548938 NPIPA3F8WFD2 350 aa11.83□□□□□ -0.52
HDAC7-228ENST00000548938 ZFAND5O76080 213 aa11.83□□□□□ -0.52
HDAC7-228ENST00000548938 JMJD7P0C870 316 aa11.83□□□□□ -0.52
HDAC7-228ENST00000548938 RAB11AP62491 216 aa11.83□□□□□ -0.52
HDAC7-228ENST00000548938 MALLQ13021 153 aa11.83□□□□□ -0.52
HDAC7-228ENST00000548938 ZNF774Q6NX45 483 aa11.83□□□□□ -0.52
HDAC7-228ENST00000548938 LHFPL2Q6ZUX7 228 aa11.83□□□□□ -0.52
HDAC7-228ENST00000548938 DPPA2Q7Z7J5 298 aa11.83□□□□□ -0.52
HDAC7-228ENST00000548938 C1orf87Q8N0U7 546 aa11.83□□□□□ -0.52
HDAC7-228ENST00000548938 FADS6Q8N9I5 356 aa11.83□□□□□ -0.52
HDAC7-228ENST00000548938 SPACA9Q96E40 222 aaPredicted RBP11.83□□□□□ -0.52
HDAC7-228ENST00000548938 TMEM56Q96MV1 263 aa11.83□□□□□ -0.52
HDAC7-228ENST00000548938 SIGLEC12Q96PQ1 595 aa11.83□□□□□ -0.52
HDAC7-228ENST00000548938 RASL10BQ96S79 203 aa11.83□□□□□ -0.52
HDAC7-228ENST00000548938 SPIN2AQ99865 258 aa11.83□□□□□ -0.52
HDAC7-228ENST00000548938 SPIN2BQ9BPZ2 258 aa11.83□□□□□ -0.52
HDAC7-228ENST00000548938 TMEM56-RWDD3S4R434 201 aa11.83□□□□□ -0.52
HDAC7-228ENST00000548938 NRASP01111 189 aa11.82□□□□□ -0.52
HDAC7-228ENST00000548938 PDGFBP01127 241 aaPredicted RBP11.82□□□□□ -0.52
HDAC7-228ENST00000548938 LCATP04180 440 aa11.82□□□□□ -0.52
HDAC7-228ENST00000548938 FUT3P21217 361 aa11.82□□□□□ -0.52
HDAC7-228ENST00000548938 CD200P41217 278 aa11.82□□□□□ -0.52
HDAC7-228ENST00000548938 TLE4Q04727 773 aa11.82□□□□□ -0.52
HDAC7-228ENST00000548938 DAZAP2Q15038 168 aaPredicted RBP11.82□□□□□ -0.52
HDAC7-228ENST00000548938 EXT1Q16394 746 aa11.82□□□□□ -0.52
HDAC7-228ENST00000548938 FAM90A2PQ658T7 463 aa11.82□□□□□ -0.52
HDAC7-228ENST00000548938 REC114Q7Z4M0 266 aa11.82□□□□□ -0.52
HDAC7-228ENST00000548938 DMRTC2Q8IXT2 367 aaPredicted RBP11.82□□□□□ -0.52
HDAC7-228ENST00000548938 C17orf78Q8N4C9 275 aa11.82□□□□□ -0.52
HDAC7-228ENST00000548938 SNX22Q96L94 193 aa11.82□□□□□ -0.52
HDAC7-228ENST00000548938 PACRGQ96M98 296 aaPredicted RBP11.82□□□□□ -0.52
HDAC7-228ENST00000548938 SMOC1Q9H4F8 434 aa11.82□□□□□ -0.52
HDAC7-228ENST00000548938 ADAMTS20P59510 1910 aa11.82□□□□□ -0.52
HDAC7-228ENST00000548938 OR7C1O76099 320 aaPredicted RBP11.82□□□□□ -0.52
HDAC7-228ENST00000548938 SELLP14151 372 aa11.82□□□□□ -0.52
HDAC7-228ENST00000548938 TCN2P20062 427 aa11.82□□□□□ -0.52
HDAC7-228ENST00000548938 MDKP21741 143 aaPredicted RBP11.82□□□□□ -0.52
HDAC7-228ENST00000548938 ZNF818PQ6ZRF7 136 aa11.82□□□□□ -0.52
HDAC7-228ENST00000548938 IL22RA1Q8N6P7 574 aa11.82□□□□□ -0.52
HDAC7-228ENST00000548938 PLPPR1Q8TBJ4 325 aa11.82□□□□□ -0.52
HDAC7-228ENST00000548938 M1APQ8TC57 530 aa11.82□□□□□ -0.52
HDAC7-228ENST00000548938 SSX3Q99909 188 aa11.82□□□□□ -0.52
HDAC7-228ENST00000548938 SEMA5BQ9P283 1151 aa11.82□□□□□ -0.52
HDAC7-228ENST00000548938 EML6Q6ZMW3 1958 aa11.82□□□□□ -0.52
HDAC7-228ENST00000548938 A0A087X0M5 115 aa11.81□□□□□ -0.52
HDAC7-228ENST00000548938 A0A1B0GX30 115 aa11.81□□□□□ -0.52
HDAC7-228ENST00000548938 H3BP45 60 aa11.81□□□□□ -0.52
HDAC7-228ENST00000548938 PATE4P0C8F1 98 aa11.81□□□□□ -0.52
HDAC7-228ENST00000548938 PGA5P0DJD9 388 aa11.81□□□□□ -0.52
HDAC7-228ENST00000548938 RBM11P57052 281 aaKnown RBP11.81□□□□□ -0.52
HDAC7-228ENST00000548938 PKIAP61925 76 aa11.81□□□□□ -0.52
HDAC7-228ENST00000548938 ZNF124Q15973 351 aa11.81□□□□□ -0.52
HDAC7-228ENST00000548938 NMSQ5H8A3 153 aa11.81□□□□□ -0.52
HDAC7-228ENST00000548938 GAPTQ8N292 157 aa11.81□□□□□ -0.52
HDAC7-228ENST00000548938 ZDBF2Q9HCK1 2354 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms