RNA–Protein interactions for RNA: ENST00000548860.5

CACNB3-209, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2

Gene CACNB3, Length 4,029 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-209ENST00000548860 MED13Q9UHV7 2174 aa12.29□□□□□ -0.44
CACNB3-209ENST00000548860 ZIC3O60481 467 aa12.28□□□□□ -0.44
CACNB3-209ENST00000548860 SCAF4O95104 1147 aaKnown RBP12.28□□□□□ -0.44
CACNB3-209ENST00000548860 HOXA4Q00056 320 aaPredicted RBP12.28□□□□□ -0.44
CACNB3-209ENST00000548860 LHFPL2Q6ZUX7 228 aa12.28□□□□□ -0.44
CACNB3-209ENST00000548860 WDR5BQ86VZ2 330 aa12.28□□□□□ -0.44
CACNB3-209ENST00000548860 ZNF441Q8N8Z8 693 aa12.28□□□□□ -0.44
CACNB3-209ENST00000548860 FRZBQ92765 325 aa12.28□□□□□ -0.44
CACNB3-209ENST00000548860 TP53RKQ96S44 253 aa12.28□□□□□ -0.44
CACNB3-209ENST00000548860 ZNF705GA8MUZ8 300 aaPredicted RBP12.28□□□□□ -0.44
CACNB3-209ENST00000548860 CYB5BO43169 146 aa12.28□□□□□ -0.44
CACNB3-209ENST00000548860 YIF1AO95070 293 aa12.28□□□□□ -0.44
CACNB3-209ENST00000548860 ADCYAP1P18509 176 aa12.28□□□□□ -0.44
CACNB3-209ENST00000548860 PTAFRP25105 342 aa12.28□□□□□ -0.44
CACNB3-209ENST00000548860 FUT6P51993 359 aa12.28□□□□□ -0.44
CACNB3-209ENST00000548860 VAX1Q5SQQ9 334 aa12.28□□□□□ -0.44
CACNB3-209ENST00000548860 CST9LP1Q5W188 147 aa12.28□□□□□ -0.44
CACNB3-209ENST00000548860 ZDHHC23Q8IYP9 409 aa12.28□□□□□ -0.44
CACNB3-209ENST00000548860 TCTEX1D2Q8WW35 142 aa12.28□□□□□ -0.44
CACNB3-209ENST00000548860 OR2H1Q9GZK4 316 aa12.28□□□□□ -0.44
CACNB3-209ENST00000548860 GPR27Q9NS67 375 aa12.28□□□□□ -0.44
CACNB3-209ENST00000548860 TMEM38BQ9NVV0 291 aa12.28□□□□□ -0.44
CACNB3-209ENST00000548860 TCFL5Q9UL49 500 aa12.28□□□□□ -0.44
CACNB3-209ENST00000548860 KPTNQ9Y664 436 aa12.28□□□□□ -0.44
CACNB3-209ENST00000548860 FRYQ5TBA9 3013 aa12.28□□□□□ -0.44
CACNB3-209ENST00000548860 DENND4AQ7Z401 1863 aa12.28□□□□□ -0.44
CACNB3-209ENST00000548860 SHISA7A6NL88 538 aa12.27□□□□□ -0.44
CACNB3-209ENST00000548860 IFNA17P01571 189 aa12.27□□□□□ -0.44
CACNB3-209ENST00000548860 LSM6P62312 80 aaKnown RBP12.27□□□□□ -0.44
CACNB3-209ENST00000548860 ZNF709Q8N972 641 aa12.27□□□□□ -0.44
CACNB3-209ENST00000548860 SPSB1Q96BD6 273 aa12.27□□□□□ -0.44
CACNB3-209ENST00000548860 C9JQL5 133 aa12.27□□□□□ -0.44
CACNB3-209ENST00000548860 LDLRAD4O15165 306 aa12.27□□□□□ -0.44
CACNB3-209ENST00000548860 MMP9P14780 707 aa12.27□□□□□ -0.44
CACNB3-209ENST00000548860 ZNF17P17021 662 aa12.27□□□□□ -0.44
CACNB3-209ENST00000548860 DVL1P1P54792 670 aaPredicted RBP12.27□□□□□ -0.44
CACNB3-209ENST00000548860 ZNF343Q6P1L6 599 aa12.27□□□□□ -0.44
CACNB3-209ENST00000548860 BTNL3Q6UXE8 466 aa12.27□□□□□ -0.44
CACNB3-209ENST00000548860 LRP11Q86VZ4 500 aa12.27□□□□□ -0.44
CACNB3-209ENST00000548860 DTX1Q86Y01 620 aa12.27□□□□□ -0.44
CACNB3-209ENST00000548860 SAP25Q8TEE9 199 aa12.27□□□□□ -0.44
CACNB3-209ENST00000548860 RSG1Q9BU20 258 aa12.27□□□□□ -0.44
CACNB3-209ENST00000548860 GAB2Q9UQC2 676 aa12.27□□□□□ -0.44
CACNB3-209ENST00000548860 OR6C6A6NF89 314 aa12.27□□□□□ -0.45
CACNB3-209ENST00000548860 CTSDP07339 412 aaPredicted RBP12.27□□□□□ -0.45
CACNB3-209ENST00000548860 ATP6V0CP27449 155 aa12.27□□□□□ -0.45
CACNB3-209ENST00000548860 OR1C1Q15619 314 aa12.27□□□□□ -0.45
CACNB3-209ENST00000548860 HFEQ30201 348 aa12.27□□□□□ -0.45
CACNB3-209ENST00000548860 LIAT1Q6ZQX7 453 aa12.27□□□□□ -0.45
CACNB3-209ENST00000548860 CT55Q8WUE5 264 aa12.27□□□□□ -0.45
CACNB3-209ENST00000548860 NIPSNAP3BQ9BS92 247 aa12.27□□□□□ -0.45
CACNB3-209ENST00000548860 SLC25A31Q9H0C2 315 aa12.27□□□□□ -0.45
CACNB3-209ENST00000548860 GPR35Q9HC97 309 aa12.27□□□□□ -0.45
CACNB3-209ENST00000548860 CACNG5Q9UF02 275 aa12.27□□□□□ -0.45
CACNB3-209ENST00000548860 DMDP11532 3685 aa12.27□□□□□ -0.45
CACNB3-209ENST00000548860 F8VVB4 439 aa12.27□□□□□ -0.45
CACNB3-209ENST00000548860 F8VWA3 439 aa12.27□□□□□ -0.45
CACNB3-209ENST00000548860 CDIPTO14735 213 aa12.27□□□□□ -0.45
CACNB3-209ENST00000548860 MPPED1O15442 326 aa12.27□□□□□ -0.45
CACNB3-209ENST00000548860 LY86O95711 162 aa12.27□□□□□ -0.45
CACNB3-209ENST00000548860 EDDM3BP56851 147 aa12.27□□□□□ -0.45
CACNB3-209ENST00000548860 DHODHQ02127 395 aa12.27□□□□□ -0.45
CACNB3-209ENST00000548860 FAHD2BQ6P2I3 314 aaPredicted RBP12.27□□□□□ -0.45
CACNB3-209ENST00000548860 POC1AQ8NBT0 407 aa12.27□□□□□ -0.45
CACNB3-209ENST00000548860 FAHD2AQ96GK7 314 aa12.27□□□□□ -0.45
CACNB3-209ENST00000548860 PFDN5Q99471 154 aa12.27□□□□□ -0.45
CACNB3-209ENST00000548860 TGIF2Q9GZN2 237 aa12.27□□□□□ -0.45
CACNB3-209ENST00000548860 H0YL77 283 aa12.26□□□□□ -0.45
CACNB3-209ENST00000548860 TAAR5O14804 337 aa12.26□□□□□ -0.45
CACNB3-209ENST00000548860 CER1O95813 267 aa12.26□□□□□ -0.45
CACNB3-209ENST00000548860 UBE2G2P60604 165 aa12.26□□□□□ -0.45
CACNB3-209ENST00000548860 NKX6-1P78426 367 aaPredicted RBP12.26□□□□□ -0.45
CACNB3-209ENST00000548860 EWSR1Q01844 656 aaKnown RBP eCLIP12.26□□□□□ -0.45
CACNB3-209ENST00000548860 PTX4Q96A99 478 aa12.26□□□□□ -0.45
CACNB3-209ENST00000548860 PLEKHA2Q9HB19 425 aa12.26□□□□□ -0.45
CACNB3-209ENST00000548860 IGHV1-45A0A0A0MS14 117 aa12.26□□□□□ -0.45
CACNB3-209ENST00000548860 ZNF266Q14584 549 aa12.26□□□□□ -0.45
CACNB3-209ENST00000548860 KCNIP1Q9NZI2 227 aa12.26□□□□□ -0.45
CACNB3-209ENST00000548860 GHRLQ9UBU3 117 aa12.26□□□□□ -0.45
CACNB3-209ENST00000548860 PLCE1Q9P212 2302 aa12.26□□□□□ -0.45
CACNB3-209ENST00000548860 IGKV1-12A0A0C4DH73 117 aa12.26□□□□□ -0.45
CACNB3-209ENST00000548860 IGKV1D-12P01611 117 aa12.26□□□□□ -0.45
CACNB3-209ENST00000548860 HGFACQ04756 655 aa12.26□□□□□ -0.45
CACNB3-209ENST00000548860 C9orf152Q5JTZ5 239 aa12.26□□□□□ -0.45
CACNB3-209ENST00000548860 HPSE2Q8WWQ2 592 aa12.26□□□□□ -0.45
CACNB3-209ENST00000548860 HS3ST6Q96QI5 342 aa12.26□□□□□ -0.45
CACNB3-209ENST00000548860 EDEM2Q9BV94 578 aa12.26□□□□□ -0.45
CACNB3-209ENST00000548860 RCC2Q9P258 522 aaKnown RBP12.26□□□□□ -0.45
CACNB3-209ENST00000548860 OSGIN2Q9Y236 505 aa12.26□□□□□ -0.45
CACNB3-209ENST00000548860 IGKV1-27A0A075B6S5 117 aa12.25□□□□□ -0.45
CACNB3-209ENST00000548860 UBE2L5PA0A1B0GUS4 154 aa12.25□□□□□ -0.45
CACNB3-209ENST00000548860 GPR137BO60478 399 aa12.25□□□□□ -0.45
CACNB3-209ENST00000548860 UMODP07911 640 aa12.25□□□□□ -0.45
CACNB3-209ENST00000548860 RAC2P15153 192 aa12.25□□□□□ -0.45
CACNB3-209ENST00000548860 UQCC3Q6UW78 93 aa12.25□□□□□ -0.45
CACNB3-209ENST00000548860 MARVELD3Q96A59 401 aa12.25□□□□□ -0.45
CACNB3-209ENST00000548860 PROB1E7EW31 1015 aa12.25□□□□□ -0.45
CACNB3-209ENST00000548860 AGFG2O95081 481 aa12.25□□□□□ -0.45
CACNB3-209ENST00000548860 IL2RAP01589 272 aa12.25□□□□□ -0.45
CACNB3-209ENST00000548860 COX6A1P12074 109 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms