RNA–Protein interactions for RNA: ENST00000547948.1

AC078880.2-201, humanhuman

TSL 1 (best) BASIC

Gene AC078880.2, Length 843 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC078880.2-201ENST00000547948 MED13Q9UHV7 2174 aa4.23□□□□□ -1.73
AC078880.2-201ENST00000547948 A0A0A6YYD4 124 aa4.23□□□□□ -1.73
AC078880.2-201ENST00000547948 IGKV1-12A0A0C4DH73 117 aa4.23□□□□□ -1.73
AC078880.2-201ENST00000547948 A0A1B0GVG6 124 aa4.23□□□□□ -1.73
AC078880.2-201ENST00000547948 MEIOCA2RUB1 952 aa4.23□□□□□ -1.73
AC078880.2-201ENST00000547948 MEIS3P1A6NDR6 274 aa4.23□□□□□ -1.73
AC078880.2-201ENST00000547948 NKX6-3A6NJ46 265 aa4.23□□□□□ -1.73
AC078880.2-201ENST00000547948 FOXI3A8MTJ6 420 aaPredicted RBP4.23□□□□□ -1.73
AC078880.2-201ENST00000547948 F5H5P2 479 aa4.23□□□□□ -1.73
AC078880.2-201ENST00000547948 CDIPTO14735 213 aa4.23□□□□□ -1.73
AC078880.2-201ENST00000547948 SH2D1BO14796 132 aa4.23□□□□□ -1.73
AC078880.2-201ENST00000547948 DEGS1O15121 323 aa4.23□□□□□ -1.73
AC078880.2-201ENST00000547948 MLNRO43193 412 aa4.23□□□□□ -1.73
AC078880.2-201ENST00000547948 SYNGR1O43759 233 aa4.23□□□□□ -1.73
AC078880.2-201ENST00000547948 SSNA1O43805 119 aa4.23□□□□□ -1.73
AC078880.2-201ENST00000547948 CREBL2O60519 120 aaPredicted RBP4.23□□□□□ -1.73
AC078880.2-201ENST00000547948 CLDN14O95500 239 aa4.23□□□□□ -1.73
AC078880.2-201ENST00000547948 IGKV1D-12P01611 117 aa4.23□□□□□ -1.73
AC078880.2-201ENST00000547948 SFTPBP07988 381 aa4.23□□□□□ -1.73
AC078880.2-201ENST00000547948 FCGR3AP08637 254 aa4.23□□□□□ -1.73
AC078880.2-201ENST00000547948 CTXN2P0C2S0 81 aa4.23□□□□□ -1.73
AC078880.2-201ENST00000547948 GLRA1P23415 457 aa4.23□□□□□ -1.73
AC078880.2-201ENST00000547948 HLA-DMAP28067 261 aa4.23□□□□□ -1.73
AC078880.2-201ENST00000547948 S100GP29377 79 aa4.23□□□□□ -1.73
AC078880.2-201ENST00000547948 HRH1P35367 487 aa4.23□□□□□ -1.73
AC078880.2-201ENST00000547948 SNU13P55769 128 aaKnown RBP4.23□□□□□ -1.73
AC078880.2-201ENST00000547948 UBE2MP61081 183 aaKnown RBP4.23□□□□□ -1.73
AC078880.2-201ENST00000547948 HERV-K104P61576 105 aa4.23□□□□□ -1.73
AC078880.2-201ENST00000547948 TNFAIP6P98066 277 aaPredicted RBP4.23□□□□□ -1.73
AC078880.2-201ENST00000547948 PMS2P11Q13670 270 aa4.23□□□□□ -1.73
AC078880.2-201ENST00000547948 ZNF146Q15072 292 aa4.23□□□□□ -1.73
AC078880.2-201ENST00000547948 CDK10Q15131 360 aa4.23□□□□□ -1.73
AC078880.2-201ENST00000547948 SURF2Q15527 256 aaPredicted RBP4.23□□□□□ -1.73
AC078880.2-201ENST00000547948 KCNJ8Q15842 424 aa4.23□□□□□ -1.73
AC078880.2-201ENST00000547948 SRSF7Q16629 238 aaKnown RBP eCLIP4.23□□□□□ -1.73
AC078880.2-201ENST00000547948 PLA1AQ53H76 456 aa4.23□□□□□ -1.73
AC078880.2-201ENST00000547948 PAN3Q58A45 887 aaKnown RBP4.23□□□□□ -1.73
AC078880.2-201ENST00000547948 FAM76BQ5HYJ3 339 aa4.23□□□□□ -1.73
AC078880.2-201ENST00000547948 PLAC9Q5JTB6 97 aa4.23□□□□□ -1.73
AC078880.2-201ENST00000547948 NCMAPQ5T1S8 102 aa4.23□□□□□ -1.73
AC078880.2-201ENST00000547948 SHEQ5VZ18 495 aa4.23□□□□□ -1.73
AC078880.2-201ENST00000547948 ADAM5Q6NVV9 412 aa4.23□□□□□ -1.73
AC078880.2-201ENST00000547948 TRAT1Q6PIZ9 186 aa4.23□□□□□ -1.73
AC078880.2-201ENST00000547948 IDO2Q6ZQW0 420 aa4.23□□□□□ -1.73
AC078880.2-201ENST00000547948 NCCRP1Q6ZVX7 275 aaPredicted RBP4.23□□□□□ -1.73
AC078880.2-201ENST00000547948 C6orf201Q7Z4U5 140 aa4.23□□□□□ -1.73
AC078880.2-201ENST00000547948 C1QL2Q7Z5L3 287 aa4.23□□□□□ -1.73
AC078880.2-201ENST00000547948 PEG10Q86TG7 708 aaKnown RBP4.23□□□□□ -1.73
AC078880.2-201ENST00000547948 ZDHHC22Q8N966 263 aa4.23□□□□□ -1.73
AC078880.2-201ENST00000547948 SCCPDHQ8NBX0 429 aa4.23□□□□□ -1.73
AC078880.2-201ENST00000547948 OR5AP2Q8NGF4 316 aa4.23□□□□□ -1.73
AC078880.2-201ENST00000547948 GIMAP1Q8WWP7 306 aa4.23□□□□□ -1.73
AC078880.2-201ENST00000547948 ASB13Q8WXK3 278 aa4.23□□□□□ -1.73
AC078880.2-201ENST00000547948 PPA2Q9H2U2 334 aa4.23□□□□□ -1.73
AC078880.2-201ENST00000547948 DECR2Q9NUI1 292 aa4.23□□□□□ -1.73
AC078880.2-201ENST00000547948 C1orf123Q9NWV4 160 aa4.23□□□□□ -1.73
AC078880.2-201ENST00000547948 ETAA1Q9NY74 926 aa4.23□□□□□ -1.73
AC078880.2-201ENST00000547948 EHFQ9NZC4 300 aa4.23□□□□□ -1.73
AC078880.2-201ENST00000547948 DNAJB11Q9UBS4 358 aa4.23□□□□□ -1.73
AC078880.2-201ENST00000547948 IL19Q9UHD0 177 aa4.23□□□□□ -1.73
AC078880.2-201ENST00000547948 ZNF221Q9UK13 617 aa4.23□□□□□ -1.73
AC078880.2-201ENST00000547948 FZR1Q9UM11 496 aa4.23□□□□□ -1.73
AC078880.2-201ENST00000547948 ATMQ13315 3056 aa4.23□□□□□ -1.73
AC078880.2-201ENST00000547948 TRAV6A0A075B6T7 132 aa4.22□□□□□ -1.73
AC078880.2-201ENST00000547948 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.22□□□□□ -1.73
AC078880.2-201ENST00000547948 TMEM30CPA0ZSE6 113 aa4.22□□□□□ -1.73
AC078880.2-201ENST00000547948 C7orf66A4D0T2 115 aa4.22□□□□□ -1.73
AC078880.2-201ENST00000547948 NKX2-6A6NCS4 301 aa4.22□□□□□ -1.73
AC078880.2-201ENST00000547948 ZSCAN5BA6NJL1 495 aa4.22□□□□□ -1.73
AC078880.2-201ENST00000547948 SNRPGP15A8MWD9 76 aa4.22□□□□□ -1.73
AC078880.2-201ENST00000547948 B9A039 149 aa4.22□□□□□ -1.73
AC078880.2-201ENST00000547948 M0QYG6 137 aa4.22□□□□□ -1.73
AC078880.2-201ENST00000547948 F2RL2O00254 374 aa4.22□□□□□ -1.73
AC078880.2-201ENST00000547948 ARPC1BO15143 372 aaKnown RBP4.22□□□□□ -1.73
AC078880.2-201ENST00000547948 SPRY3O43610 288 aa4.22□□□□□ -1.73
AC078880.2-201ENST00000547948 SSX4O60224 188 aa4.22□□□□□ -1.73
AC078880.2-201ENST00000547948 SSX5O60225 188 aa4.22□□□□□ -1.73
AC078880.2-201ENST00000547948 CCNKO75909 580 aa4.22□□□□□ -1.73
AC078880.2-201ENST00000547948 DIRAS3O95661 229 aa4.22□□□□□ -1.73
AC078880.2-201ENST00000547948 PTBP3O95758 552 aaKnown RBP4.22□□□□□ -1.73
AC078880.2-201ENST00000547948 HAND1O96004 215 aa4.22□□□□□ -1.73
AC078880.2-201ENST00000547948 TK1P04183 234 aa4.22□□□□□ -1.73
AC078880.2-201ENST00000547948 RLN1P04808 185 aa4.22□□□□□ -1.73
AC078880.2-201ENST00000547948 IL5P05113 134 aa4.22□□□□□ -1.73
AC078880.2-201ENST00000547948 CSN2P05814 226 aa4.22□□□□□ -1.73
AC078880.2-201ENST00000547948 CD55P08174 381 aa4.22□□□□□ -1.73
AC078880.2-201ENST00000547948 ADH4P08319 380 aa4.22□□□□□ -1.73
AC078880.2-201ENST00000547948 OR4A8P0C604 315 aa4.22□□□□□ -1.73
AC078880.2-201ENST00000547948 PTHLHP12272 177 aa4.22□□□□□ -1.73
AC078880.2-201ENST00000547948 ANXA3P12429 323 aa4.22□□□□□ -1.73
AC078880.2-201ENST00000547948 SPNP16150 400 aa4.22□□□□□ -1.73
AC078880.2-201ENST00000547948 APOBEC3AP31941 199 aaPredicted RBP4.22□□□□□ -1.73
AC078880.2-201ENST00000547948 BTCP35070 178 aa4.22□□□□□ -1.73
AC078880.2-201ENST00000547948 SERPINF1P36955 418 aa4.22□□□□□ -1.73
AC078880.2-201ENST00000547948 CFHR2P36980 270 aa4.22□□□□□ -1.73
AC078880.2-201ENST00000547948 NPBWR2P48146 333 aa4.22□□□□□ -1.73
AC078880.2-201ENST00000547948 CCR6P51684 374 aa4.22□□□□□ -1.73
AC078880.2-201ENST00000547948 TMEM50BP56557 158 aa4.22□□□□□ -1.73
AC078880.2-201ENST00000547948 SEC61A1P61619 476 aaKnown RBP4.22□□□□□ -1.73
AC078880.2-201ENST00000547948 ADORA2A-AS1P86434 159 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms