RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 OR8B3Q8NGG8 313 aa13.2□□□□□ -0.3
TRAFD1-203ENST00000547063 GPX8Q8TED1 209 aa13.2□□□□□ -0.3
TRAFD1-203ENST00000547063 C10orf105Q8TEF2 133 aa13.2□□□□□ -0.3
TRAFD1-203ENST00000547063 BORCS5Q969J3 196 aa13.2□□□□□ -0.3
TRAFD1-203ENST00000547063 NEIL1Q96FI4 390 aaPredicted RBP13.2□□□□□ -0.3
TRAFD1-203ENST00000547063 OR8B2Q96RD0 313 aa13.2□□□□□ -0.3
TRAFD1-203ENST00000547063 OCSTAMPQ9BR26 566 aa13.2□□□□□ -0.3
TRAFD1-203ENST00000547063 NCOR1P1Q9H4R4 102 aa13.2□□□□□ -0.3
TRAFD1-203ENST00000547063 CHMP1AQ9HD42 196 aaPredicted RBP13.2□□□□□ -0.3
TRAFD1-203ENST00000547063 IFT46Q9NQC8 304 aa13.2□□□□□ -0.3
TRAFD1-203ENST00000547063 TAS2R8Q9NYW2 309 aa13.2□□□□□ -0.3
TRAFD1-203ENST00000547063 SLC25A10Q9UBX3 287 aaPredicted RBP13.2□□□□□ -0.3
TRAFD1-203ENST00000547063 TRBV6-6A0A0A6YYG2 114 aa13.19□□□□□ -0.3
TRAFD1-203ENST00000547063 TMEM30CPA0ZSE6 113 aa13.19□□□□□ -0.3
TRAFD1-203ENST00000547063 GSTT2BP0CG30 244 aa13.19□□□□□ -0.3
TRAFD1-203ENST00000547063 RPS2P15880 293 aaKnown RBP13.19□□□□□ -0.3
TRAFD1-203ENST00000547063 AMY2BP19961 511 aa13.19□□□□□ -0.3
TRAFD1-203ENST00000547063 ERP29P30040 261 aaKnown RBP13.19□□□□□ -0.3
TRAFD1-203ENST00000547063 INPP1P49441 399 aa13.19□□□□□ -0.3
TRAFD1-203ENST00000547063 AP3S2P59780 193 aa13.19□□□□□ -0.3
TRAFD1-203ENST00000547063 ATXN7L3Q14CW9 347 aaPredicted RBP13.19□□□□□ -0.3
TRAFD1-203ENST00000547063 C11orf91Q3C1V1 193 aa13.19□□□□□ -0.3
TRAFD1-203ENST00000547063 TRIQKQ629K1 86 aa13.19□□□□□ -0.3
TRAFD1-203ENST00000547063 OLFML2AQ68BL7 652 aa13.19□□□□□ -0.3
TRAFD1-203ENST00000547063 ZNF497Q6ZNH5 498 aa13.19□□□□□ -0.3
TRAFD1-203ENST00000547063 TRAPPC6BQ86SZ2 158 aa13.19□□□□□ -0.3
TRAFD1-203ENST00000547063 FAM216BQ8N7L0 139 aa13.19□□□□□ -0.3
TRAFD1-203ENST00000547063 NUDCD2Q8WVJ2 157 aa13.19□□□□□ -0.3
TRAFD1-203ENST00000547063 THAP7Q9BT49 309 aaPredicted RBP13.19□□□□□ -0.3
TRAFD1-203ENST00000547063 SHARPINQ9H0F6 387 aa13.19□□□□□ -0.3
TRAFD1-203ENST00000547063 PATZ1Q9HBE1 687 aaKnown RBP13.19□□□□□ -0.3
TRAFD1-203ENST00000547063 LPAR3Q9UBY5 353 aa13.19□□□□□ -0.3
TRAFD1-203ENST00000547063 ZNF107Q9UII5 783 aaPredicted RBP13.19□□□□□ -0.3
TRAFD1-203ENST00000547063 METRNQ9UJH8 293 aa13.19□□□□□ -0.3
TRAFD1-203ENST00000547063 NAPSAO96009 420 aa13.18□□□□□ -0.3
TRAFD1-203ENST00000547063 TFF1P04155 84 aa13.18□□□□□ -0.3
TRAFD1-203ENST00000547063 HEXAP06865 529 aa13.18□□□□□ -0.3
TRAFD1-203ENST00000547063 PTHLHP12272 177 aa13.18□□□□□ -0.3
TRAFD1-203ENST00000547063 SLC25A16P16260 332 aa13.18□□□□□ -0.3
TRAFD1-203ENST00000547063 RCVRNP35243 200 aa13.18□□□□□ -0.3
TRAFD1-203ENST00000547063 DGCR2P98153 550 aa13.18□□□□□ -0.3
TRAFD1-203ENST00000547063 SRSF7Q16629 238 aaKnown RBP eCLIP13.18□□□□□ -0.3
TRAFD1-203ENST00000547063 KRBOX4Q5JUW0 171 aa13.18□□□□□ -0.3
TRAFD1-203ENST00000547063 PRSS57Q6UWY2 283 aa13.18□□□□□ -0.3
TRAFD1-203ENST00000547063 GAPTQ8N292 157 aa13.18□□□□□ -0.3
TRAFD1-203ENST00000547063 OR52I2Q8NH67 350 aa13.18□□□□□ -0.3
TRAFD1-203ENST00000547063 DEDD2Q8WXF8 326 aa13.18□□□□□ -0.3
TRAFD1-203ENST00000547063 RAB39BQ96DA2 213 aa13.18□□□□□ -0.3
TRAFD1-203ENST00000547063 BPESC1Q9GZL8 116 aa13.18□□□□□ -0.3
TRAFD1-203ENST00000547063 MTFP1Q9UDX5 166 aa13.18□□□□□ -0.3
TRAFD1-203ENST00000547063 CENPEQ02224 2701 aa13.18□□□□□ -0.3
TRAFD1-203ENST00000547063 MEIOCA2RUB1 952 aa13.17□□□□□ -0.3
TRAFD1-203ENST00000547063 J3QRK9 145 aa13.17□□□□□ -0.3
TRAFD1-203ENST00000547063 DVL1O14640 695 aa13.17□□□□□ -0.3
TRAFD1-203ENST00000547063 SSX5O60225 188 aa13.17□□□□□ -0.3
TRAFD1-203ENST00000547063 ECDO95905 644 aaPredicted RBP13.17□□□□□ -0.3
TRAFD1-203ENST00000547063 FCGR3AP08637 254 aa13.17□□□□□ -0.3
TRAFD1-203ENST00000547063 WNT2P09544 360 aa13.17□□□□□ -0.3
TRAFD1-203ENST00000547063 CSF1P09603 554 aa13.17□□□□□ -0.3
TRAFD1-203ENST00000547063 NDUFB7P17568 137 aa13.17□□□□□ -0.3
TRAFD1-203ENST00000547063 P2RX3P56373 397 aa13.17□□□□□ -0.3
TRAFD1-203ENST00000547063 GUCA2AQ02747 115 aa13.17□□□□□ -0.3
TRAFD1-203ENST00000547063 CLEC12BQ2HXU8 276 aa13.17□□□□□ -0.3
TRAFD1-203ENST00000547063 RSBN1Q5VWQ0 802 aaPredicted RBP13.17□□□□□ -0.3
TRAFD1-203ENST00000547063 TRAT1Q6PIZ9 186 aa13.17□□□□□ -0.3
TRAFD1-203ENST00000547063 LYPD2Q6UXB3 125 aa13.17□□□□□ -0.3
TRAFD1-203ENST00000547063 ZNF554Q86TJ5 538 aa13.17□□□□□ -0.3
TRAFD1-203ENST00000547063 PLPPR1Q8TBJ4 325 aa13.17□□□□□ -0.3
TRAFD1-203ENST00000547063 SDHCQ99643 169 aaPredicted RBP13.17□□□□□ -0.3
TRAFD1-203ENST00000547063 PALMDQ9NP74 551 aa13.17□□□□□ -0.3
TRAFD1-203ENST00000547063 RAB9BQ9NP90 201 aa13.17□□□□□ -0.3
TRAFD1-203ENST00000547063 OR6C3Q9NZP0 311 aa13.17□□□□□ -0.3
TRAFD1-203ENST00000547063 CLN8Q9UBY8 286 aa13.17□□□□□ -0.3
TRAFD1-203ENST00000547063 ELF5Q9UKW6 265 aaPredicted RBP13.17□□□□□ -0.3
TRAFD1-203ENST00000547063 TRAPPC2LQ9UL33 140 aa13.17□□□□□ -0.3
TRAFD1-203ENST00000547063 RBMX2Q9Y388 322 aaKnown RBP13.17□□□□□ -0.3
TRAFD1-203ENST00000547063 ANKRD17O75179 2603 aaKnown RBP13.17□□□□□ -0.3
TRAFD1-203ENST00000547063 ABCA12Q86UK0 2595 aa13.16□□□□□ -0.3
TRAFD1-203ENST00000547063 MEIKINA0A087WXM9 373 aa13.16□□□□□ -0.3
TRAFD1-203ENST00000547063 KIR2DS1A0A191URI9 304 aa13.16□□□□□ -0.3
TRAFD1-203ENST00000547063 VWC2LB2RUY7 222 aa13.16□□□□□ -0.3
TRAFD1-203ENST00000547063 F5H0A9 414 aaPredicted RBP13.16□□□□□ -0.3
TRAFD1-203ENST00000547063 ORC5O43913 435 aa13.16□□□□□ -0.3
TRAFD1-203ENST00000547063 MT-ND4P03905 459 aa13.16□□□□□ -0.3
TRAFD1-203ENST00000547063 IL7P13232 177 aa13.16□□□□□ -0.3
TRAFD1-203ENST00000547063 TBPP20226 339 aa13.16□□□□□ -0.3
TRAFD1-203ENST00000547063 GDNFP39905 211 aa13.16□□□□□ -0.3
TRAFD1-203ENST00000547063 KIR2DS4P43632 304 aa13.16□□□□□ -0.3
TRAFD1-203ENST00000547063 EDDM3BP56851 147 aa13.16□□□□□ -0.3
TRAFD1-203ENST00000547063 MEF2CQ06413 473 aaPredicted RBP13.16□□□□□ -0.3
TRAFD1-203ENST00000547063 AESQ08117 197 aa13.16□□□□□ -0.3
TRAFD1-203ENST00000547063 EDDM3AQ14507 147 aa13.16□□□□□ -0.3
TRAFD1-203ENST00000547063 KIR2DS1Q14954 304 aa13.16□□□□□ -0.3
TRAFD1-203ENST00000547063 ESCO2Q56NI9 601 aa13.16□□□□□ -0.3
TRAFD1-203ENST00000547063 RNASE12Q5GAN4 147 aaKnown RBP13.16□□□□□ -0.3
TRAFD1-203ENST00000547063 C6orf183Q5T699 404 aa13.16□□□□□ -0.3
TRAFD1-203ENST00000547063 C16orf87Q6PH81 154 aa13.16□□□□□ -0.3
TRAFD1-203ENST00000547063 Q6ZS49 121 aa13.16□□□□□ -0.3
TRAFD1-203ENST00000547063 RTN4RL2Q86UN3 420 aa13.16□□□□□ -0.3
TRAFD1-203ENST00000547063 HOGA1Q86XE5 327 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms