RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 OR2V1Q8NHB1 315 aa11.3□□□□□ -0.6
PTCH1-212ENST00000546744 MYEOVQ96EZ4 313 aa11.3□□□□□ -0.6
PTCH1-212ENST00000546744 RALYQ9UKM9 306 aaKnown RBP11.3□□□□□ -0.6
PTCH1-212ENST00000546744 SIRT4Q9Y6E7 314 aaPredicted RBP11.3□□□□□ -0.6
PTCH1-212ENST00000546744 CORTO00230 105 aa11.3□□□□□ -0.6
PTCH1-212ENST00000546744 CER1O95813 267 aa11.3□□□□□ -0.6
PTCH1-212ENST00000546744 SCGB1C2P0DMR2 95 aa11.3□□□□□ -0.6
PTCH1-212ENST00000546744 SKP2Q13309 424 aa11.3□□□□□ -0.6
PTCH1-212ENST00000546744 TMEM252Q8N6L7 170 aa11.3□□□□□ -0.6
PTCH1-212ENST00000546744 BHLHE23Q8NDY6 225 aa11.3□□□□□ -0.6
PTCH1-212ENST00000546744 OR5D13Q8NGL4 314 aa11.3□□□□□ -0.6
PTCH1-212ENST00000546744 OR1N1Q8NGS0 311 aa11.3□□□□□ -0.6
PTCH1-212ENST00000546744 ALG14Q96F25 216 aa11.3□□□□□ -0.6
PTCH1-212ENST00000546744 HSPB9Q9BQS6 159 aa11.3□□□□□ -0.6
PTCH1-212ENST00000546744 SLC22A20A6NK97 555 aa11.29□□□□□ -0.6
PTCH1-212ENST00000546744 IFITM10A6NMD0 228 aa11.29□□□□□ -0.6
PTCH1-212ENST00000546744 SMPD2O60906 423 aa11.29□□□□□ -0.6
PTCH1-212ENST00000546744 RHBDL1O75783 438 aa11.29□□□□□ -0.6
PTCH1-212ENST00000546744 PIAS2O75928 621 aa11.29□□□□□ -0.6
PTCH1-212ENST00000546744 TRGC1P0CF51 173 aa11.29□□□□□ -0.6
PTCH1-212ENST00000546744 CD226Q15762 336 aa11.29□□□□□ -0.6
PTCH1-212ENST00000546744 ARSJQ5FYB0 599 aaPredicted RBP11.29□□□□□ -0.6
PTCH1-212ENST00000546744 CYB5R2Q6BCY4 276 aa11.29□□□□□ -0.6
PTCH1-212ENST00000546744 FDX2Q6P4F2 183 aa11.29□□□□□ -0.6
PTCH1-212ENST00000546744 MRPL52Q86TS9 123 aaKnown RBP11.29□□□□□ -0.6
PTCH1-212ENST00000546744 OR51B6Q9H340 312 aa11.29□□□□□ -0.6
PTCH1-212ENST00000546744 MAP1BP46821 2468 aaKnown RBP11.29□□□□□ -0.6
PTCH1-212ENST00000546744 FAM90A26D6RGX4 464 aa11.29□□□□□ -0.6
PTCH1-212ENST00000546744 ZNF260Q3ZCT1 412 aa11.29□□□□□ -0.6
PTCH1-212ENST00000546744 ADAD2Q8NCV1 583 aaKnown RBP11.29□□□□□ -0.6
PTCH1-212ENST00000546744 SMIM8Q96KF7 97 aa11.29□□□□□ -0.6
PTCH1-212ENST00000546744 SOSTQ9BQB4 213 aa11.29□□□□□ -0.6
PTCH1-212ENST00000546744 HES4Q9HCC6 221 aa11.29□□□□□ -0.6
PTCH1-212ENST00000546744 PTPRZ1P23471 2315 aaPredicted RBP11.29□□□□□ -0.6
PTCH1-212ENST00000546744 TRAV9-1A0A075B6T8 112 aa11.29□□□□□ -0.6
PTCH1-212ENST00000546744 IGSF23A1L1A6 192 aa11.29□□□□□ -0.6
PTCH1-212ENST00000546744 KLRC4-KLRK1H3BQV0 150 aa11.29□□□□□ -0.6
PTCH1-212ENST00000546744 EFNB1P98172 346 aa11.29□□□□□ -0.6
PTCH1-212ENST00000546744 FOXF1Q12946 379 aa11.29□□□□□ -0.6
PTCH1-212ENST00000546744 RIPPLY2Q5TAB7 128 aa11.29□□□□□ -0.6
PTCH1-212ENST00000546744 ZNF835Q9Y2P0 537 aa11.29□□□□□ -0.6
PTCH1-212ENST00000546744 MPC1Q9Y5U8 109 aa11.29□□□□□ -0.6
PTCH1-212ENST00000546744 TTC3P53804 2025 aa11.29□□□□□ -0.6
PTCH1-212ENST00000546744 SERTM2A0A1B0GWG4 89 aa11.28□□□□□ -0.6
PTCH1-212ENST00000546744 SIRPB1O00241 398 aa11.28□□□□□ -0.6
PTCH1-212ENST00000546744 SIGLEC5O15389 551 aa11.28□□□□□ -0.6
PTCH1-212ENST00000546744 CRYABP02511 175 aaKnown RBP11.28□□□□□ -0.6
PTCH1-212ENST00000546744 APCSP02743 223 aa11.28□□□□□ -0.6
PTCH1-212ENST00000546744 ISG15P05161 165 aa11.28□□□□□ -0.6
PTCH1-212ENST00000546744 MELTFP08582 738 aa11.28□□□□□ -0.6
PTCH1-212ENST00000546744 HKR1P10072 659 aa11.28□□□□□ -0.6
PTCH1-212ENST00000546744 ZNF880Q6PDB4 577 aa11.28□□□□□ -0.6
PTCH1-212ENST00000546744 APCDD1LQ8NCL9 501 aa11.28□□□□□ -0.6
PTCH1-212ENST00000546744 RSG1Q9BU20 258 aa11.28□□□□□ -0.6
PTCH1-212ENST00000546744 OR1A1Q9P1Q5 309 aa11.28□□□□□ -0.6
PTCH1-212ENST00000546744 KLK13Q9UKR3 277 aa11.28□□□□□ -0.6
PTCH1-212ENST00000546744 ZFP30Q9Y2G7 519 aa11.28□□□□□ -0.6
PTCH1-212ENST00000546744 CASP8AP2Q9UKL3 1982 aa11.28□□□□□ -0.6
PTCH1-212ENST00000546744 SIP14410 1827 aa11.28□□□□□ -0.6
PTCH1-212ENST00000546744 SOCS1O15524 211 aa11.28□□□□□ -0.6
PTCH1-212ENST00000546744 FABP2P12104 132 aa11.28□□□□□ -0.6
PTCH1-212ENST00000546744 DEFA4P12838 97 aa11.28□□□□□ -0.6
PTCH1-212ENST00000546744 CYB561P49447 251 aa11.28□□□□□ -0.6
PTCH1-212ENST00000546744 GAMTQ14353 236 aa11.28□□□□□ -0.6
PTCH1-212ENST00000546744 EDDM3AQ14507 147 aa11.28□□□□□ -0.6
PTCH1-212ENST00000546744 ZNF766Q5HY98 468 aa11.28□□□□□ -0.6
PTCH1-212ENST00000546744 ZNF506Q5JVG8 444 aa11.28□□□□□ -0.6
PTCH1-212ENST00000546744 SPNS3Q6ZMD2 512 aa11.28□□□□□ -0.6
PTCH1-212ENST00000546744 MRGPRX1Q96LB2 322 aa11.28□□□□□ -0.6
PTCH1-212ENST00000546744 GPA33Q99795 319 aa11.28□□□□□ -0.6
PTCH1-212ENST00000546744 FOXB1Q99853 325 aa11.28□□□□□ -0.6
PTCH1-212ENST00000546744 AAMDCQ9H7C9 122 aa11.28□□□□□ -0.6
PTCH1-212ENST00000546744 HCFC2Q9Y5Z7 792 aa11.28□□□□□ -0.6
PTCH1-212ENST00000546744 FGF8P55075 233 aaPredicted RBP11.28□□□□□ -0.6
PTCH1-212ENST00000546744 PLP1P60201 277 aa11.28□□□□□ -0.6
PTCH1-212ENST00000546744 RPS11P62280 158 aaKnown RBP eCLIP11.28□□□□□ -0.6
PTCH1-212ENST00000546744 MESTQ5EB52 335 aa11.28□□□□□ -0.6
PTCH1-212ENST00000546744 RSPO2Q6UXX9 243 aaPredicted RBP11.28□□□□□ -0.6
PTCH1-212ENST00000546744 SLC36A1Q7Z2H8 476 aa11.28□□□□□ -0.6
PTCH1-212ENST00000546744 SPNS2Q8IVW8 549 aa11.28□□□□□ -0.6
PTCH1-212ENST00000546744 OR52L2PQ8NGH6 319 aa11.28□□□□□ -0.6
PTCH1-212ENST00000546744 BLNKQ8WV28 456 aa11.28□□□□□ -0.6
PTCH1-212ENST00000546744 EID2BQ96D98 161 aa11.28□□□□□ -0.6
PTCH1-212ENST00000546744 RHOVQ96L33 236 aa11.28□□□□□ -0.6
PTCH1-212ENST00000546744 FAM234AQ9H0X4 552 aa11.28□□□□□ -0.6
PTCH1-212ENST00000546744 TIMM9Q9Y5J7 89 aa11.28□□□□□ -0.6
PTCH1-212ENST00000546744 PMS2P1A4D2B8 440 aa11.28□□□□□ -0.6
PTCH1-212ENST00000546744 GRPP07492 148 aa11.28□□□□□ -0.6
PTCH1-212ENST00000546744 TMEM178AQ8NBL3 297 aa11.28□□□□□ -0.6
PTCH1-212ENST00000546744 PSMG3Q9BT73 122 aaPredicted RBP11.28□□□□□ -0.6
PTCH1-212ENST00000546744 EGLN1Q9GZT9 426 aa11.28□□□□□ -0.6
PTCH1-212ENST00000546744 SPRY1O43609 319 aaPredicted RBP11.27□□□□□ -0.6
PTCH1-212ENST00000546744 ARG2P78540 354 aa11.27□□□□□ -0.6
PTCH1-212ENST00000546744 KCNAB1Q14722 419 aa11.27□□□□□ -0.6
PTCH1-212ENST00000546744 SPATA45Q537H7 98 aa11.27□□□□□ -0.6
PTCH1-212ENST00000546744 BOD1Q96IK1 185 aa11.27□□□□□ -0.6
PTCH1-212ENST00000546744 FLRT3Q9NZU0 649 aa11.27□□□□□ -0.6
PTCH1-212ENST00000546744 A0A1W2PNR3 127 aa11.27□□□□□ -0.61
PTCH1-212ENST00000546744 HELTA6NFD8 242 aa11.27□□□□□ -0.61
PTCH1-212ENST00000546744 LRRC3CA6NJW4 275 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms