RNA–Protein interactions for RNA: ENST00000546211.5

SKP2-208, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 5 BASIC

Gene SKP2, Length 1,589 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-208ENST00000546211 KIR2DS1Q14954 304 aa16.32■□□□□ 0.2
SKP2-208ENST00000546211 ZNF497Q6ZNH5 498 aa16.32■□□□□ 0.2
SKP2-208ENST00000546211 Q6ZPA2 131 aa16.32■□□□□ 0.2
SKP2-208ENST00000546211 MOB1BQ7L9L4 216 aa16.32■□□□□ 0.2
SKP2-208ENST00000546211 C1orf87Q8N0U7 546 aa16.32■□□□□ 0.2
SKP2-208ENST00000546211 CD177Q8N6Q3 437 aa16.32■□□□□ 0.2
SKP2-208ENST00000546211 PLPPR1Q8TBJ4 325 aa16.32■□□□□ 0.2
SKP2-208ENST00000546211 ING3Q9NXR8 418 aa16.32■□□□□ 0.2
SKP2-208ENST00000546211 PLCE1Q9P212 2302 aa16.32■□□□□ 0.2
SKP2-208ENST00000546211 IGKV1D-17A0A075B6S4 117 aa16.31■□□□□ 0.2
SKP2-208ENST00000546211 A0A0A6YYJ9 748 aa16.31■□□□□ 0.2
SKP2-208ENST00000546211 C7orf66A4D0T2 115 aa16.31■□□□□ 0.2
SKP2-208ENST00000546211 GSTT2P0CG29 244 aa16.31■□□□□ 0.2
SKP2-208ENST00000546211 OR5H8P0DN80 308 aa16.31■□□□□ 0.2
SKP2-208ENST00000546211 ANXA7P20073 488 aaKnown RBP16.31■□□□□ 0.2
SKP2-208ENST00000546211 GABRA2P47869 451 aa16.31■□□□□ 0.2
SKP2-208ENST00000546211 ZDHHC22Q8N966 263 aa16.31■□□□□ 0.2
SKP2-208ENST00000546211 ASCC1Q8N9N2 400 aaKnown RBP16.31■□□□□ 0.2
SKP2-208ENST00000546211 OR6F1Q8NGZ6 308 aa16.31■□□□□ 0.2
SKP2-208ENST00000546211 MGAT4AQ9UM21 535 aa16.31■□□□□ 0.2
SKP2-208ENST00000546211 CHD3Q12873 2000 aaKnown RBP16.31■□□□□ 0.2
SKP2-208ENST00000546211 TRDCB7Z8K6 153 aa16.3■□□□□ 0.2
SKP2-208ENST00000546211 PPOXP50336 477 aa16.3■□□□□ 0.2
SKP2-208ENST00000546211 CBX3Q13185 183 aa16.3■□□□□ 0.2
SKP2-208ENST00000546211 METTL11BQ5VVY1 283 aa16.3■□□□□ 0.2
SKP2-208ENST00000546211 ZNF880Q6PDB4 577 aa16.3■□□□□ 0.2
SKP2-208ENST00000546211 GAPTQ8N292 157 aa16.3■□□□□ 0.2
SKP2-208ENST00000546211 PPP1R35Q8TAP8 253 aa16.3■□□□□ 0.2
SKP2-208ENST00000546211 CCDC107Q8WV48 283 aa16.3■□□□□ 0.2
SKP2-208ENST00000546211 VRK1Q99986 396 aaPredicted RBP16.3■□□□□ 0.2
SKP2-208ENST00000546211 GPN1Q9HCN4 374 aaPredicted RBP16.3■□□□□ 0.2
SKP2-208ENST00000546211 TRAPPC2LQ9UL33 140 aa16.3■□□□□ 0.2
SKP2-208ENST00000546211 ANKHD1Q8IWZ3 2542 aaKnown RBP16.3■□□□□ 0.2
SKP2-208ENST00000546211 TMEM30CPA0ZSE6 113 aa16.3■□□□□ 0.2
SKP2-208ENST00000546211 HMX3A6NHT5 357 aa16.3■□□□□ 0.2
SKP2-208ENST00000546211 FABP7O15540 132 aa16.3■□□□□ 0.2
SKP2-208ENST00000546211 TFF1P04155 84 aa16.3■□□□□ 0.2
SKP2-208ENST00000546211 IL5P05113 134 aa16.3■□□□□ 0.2
SKP2-208ENST00000546211 TRAPPC2P0DI81 140 aa16.3■□□□□ 0.2
SKP2-208ENST00000546211 TRAPPC2BP0DI82 140 aa16.3■□□□□ 0.2
SKP2-208ENST00000546211 MUC1P15941 1255 aaPredicted RBP16.3■□□□□ 0.2
SKP2-208ENST00000546211 GLP1RP43220 463 aa16.3■□□□□ 0.2
SKP2-208ENST00000546211 OR3A1P47881 315 aa16.3■□□□□ 0.2
SKP2-208ENST00000546211 FAM201AQ5SY85 155 aa16.3■□□□□ 0.2
SKP2-208ENST00000546211 ATPAF1Q5TC12 328 aaPredicted RBP16.3■□□□□ 0.2
SKP2-208ENST00000546211 MEX3BQ6ZN04 569 aaKnown RBP16.3■□□□□ 0.2
SKP2-208ENST00000546211 C20orf204Q6ZNR8 217 aa16.3■□□□□ 0.2
SKP2-208ENST00000546211 AKAP14Q86UN6 197 aa16.3■□□□□ 0.2
SKP2-208ENST00000546211 LHFPL1Q86WI0 220 aa16.3■□□□□ 0.2
SKP2-208ENST00000546211 SCGB3A2Q96PL1 93 aa16.3■□□□□ 0.2
SKP2-208ENST00000546211 NEURL2Q9BR09 285 aa16.3■□□□□ 0.2
SKP2-208ENST00000546211 ZNF2Q9BSG1 426 aaPredicted RBP16.3■□□□□ 0.2
SKP2-208ENST00000546211 GHITMQ9H3K2 345 aa16.3■□□□□ 0.2
SKP2-208ENST00000546211 CBLN4Q9NTU7 201 aa16.3■□□□□ 0.2
SKP2-208ENST00000546211 METRNQ9UJH8 293 aa16.3■□□□□ 0.2
SKP2-208ENST00000546211 ADGRG4Q8IZF6 3080 aa16.29■□□□□ 0.2
SKP2-208ENST00000546211 OOEPA6NGQ2 149 aa16.29■□□□□ 0.2
SKP2-208ENST00000546211 ECI1P42126 302 aa16.29■□□□□ 0.2
SKP2-208ENST00000546211 SLC35E4Q6ICL7 350 aa16.29■□□□□ 0.2
SKP2-208ENST00000546211 GLDNQ6ZMI3 551 aaPredicted RBP16.29■□□□□ 0.2
SKP2-208ENST00000546211 C17orf107Q6ZR85 190 aa16.29■□□□□ 0.2
SKP2-208ENST00000546211 TMED4Q7Z7H5 227 aa16.29■□□□□ 0.2
SKP2-208ENST00000546211 TGIF2LYQ8IUE0 185 aa16.29■□□□□ 0.2
SKP2-208ENST00000546211 ANGPTL6Q8NI99 470 aa16.29■□□□□ 0.2
SKP2-208ENST00000546211 MARCH1Q8TCQ1 289 aa16.29■□□□□ 0.2
SKP2-208ENST00000546211 MRGPRFQ96AM1 343 aa16.29■□□□□ 0.2
SKP2-208ENST00000546211 PPP1R14BQ96C90 147 aa16.29■□□□□ 0.2
SKP2-208ENST00000546211 MED30Q96HR3 178 aa16.29■□□□□ 0.2
SKP2-208ENST00000546211 SNX22Q96L94 193 aa16.29■□□□□ 0.2
SKP2-208ENST00000546211 ALX4Q9H161 411 aaPredicted RBP16.29■□□□□ 0.2
SKP2-208ENST00000546211 OR51J1Q9H342 316 aa16.29■□□□□ 0.2
SKP2-208ENST00000546211 ZNF222Q9UK12 451 aa16.29■□□□□ 0.2
SKP2-208ENST00000546211 VSIG4Q9Y279 399 aa16.29■□□□□ 0.2
SKP2-208ENST00000546211 SMG1Q96Q15 3661 aaKnown RBP16.28■□□□□ 0.2
SKP2-208ENST00000546211 CTXN2P0C2S0 81 aa16.28■□□□□ 0.2
SKP2-208ENST00000546211 NPY4RP50391 375 aa16.28■□□□□ 0.2
SKP2-208ENST00000546211 HLA-DRB3P79483 266 aa16.28■□□□□ 0.2
SKP2-208ENST00000546211 TEX36Q5VZQ5 186 aa16.28■□□□□ 0.2
SKP2-208ENST00000546211 STUMQ69YW2 141 aa16.28■□□□□ 0.2
SKP2-208ENST00000546211 DHRS11Q6UWP2 260 aa16.28■□□□□ 0.2
SKP2-208ENST00000546211 CCL17Q92583 94 aa16.28■□□□□ 0.2
SKP2-208ENST00000546211 TMEM106BQ9NUM4 274 aa16.28■□□□□ 0.2
SKP2-208ENST00000546211 CFAP46Q8IYW2 2715 aa16.27■□□□□ 0.2
SKP2-208ENST00000546211 IGHV1-69-2A0A0G2JMI3 117 aa16.27■□□□□ 0.2
SKP2-208ENST00000546211 CEACAM18A8MTB9 384 aa16.27■□□□□ 0.2
SKP2-208ENST00000546211 TMEM178BH3BS89 294 aa16.27■□□□□ 0.2
SKP2-208ENST00000546211 ZNF737O75373 536 aa16.27■□□□□ 0.2
SKP2-208ENST00000546211 ZNF205O95201 554 aa16.27■□□□□ 0.2
SKP2-208ENST00000546211 SCTP09683 121 aa16.27■□□□□ 0.2
SKP2-208ENST00000546211 RCC1P18754 421 aaPredicted RBP16.27■□□□□ 0.2
SKP2-208ENST00000546211 FPR2P25090 351 aa16.27■□□□□ 0.2
SKP2-208ENST00000546211 SEC61A1P61619 476 aaKnown RBP16.27■□□□□ 0.2
SKP2-208ENST00000546211 RRAS2P62070 204 aaPredicted RBP16.27■□□□□ 0.2
SKP2-208ENST00000546211 AESQ08117 197 aa16.27■□□□□ 0.2
SKP2-208ENST00000546211 IGSF11Q5DX21 431 aa16.27■□□□□ 0.2
SKP2-208ENST00000546211 KRBOX4Q5JUW0 171 aa16.27■□□□□ 0.2
SKP2-208ENST00000546211 AADACL3Q5VUY0 350 aa16.27■□□□□ 0.2
SKP2-208ENST00000546211 SLC36A1Q7Z2H8 476 aa16.27■□□□□ 0.2
SKP2-208ENST00000546211 ZNF554Q86TJ5 538 aa16.27■□□□□ 0.2
SKP2-208ENST00000546211 ZNF561Q8N587 486 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms