RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 GPR137BO60478 399 aa9.64□□□□□ -0.87
YBX3-217ENST00000546164 NDUFA7O95182 113 aa9.64□□□□□ -0.87
YBX3-217ENST00000546164 CSTBP04080 98 aaKnown RBP9.64□□□□□ -0.87
YBX3-217ENST00000546164 MAS1P04201 325 aa9.64□□□□□ -0.87
YBX3-217ENST00000546164 GTF2F2P13984 249 aa9.64□□□□□ -0.87
YBX3-217ENST00000546164 CFPP27918 469 aa9.64□□□□□ -0.87
YBX3-217ENST00000546164 GP2P55259 537 aaKnown RBP9.64□□□□□ -0.87
YBX3-217ENST00000546164 INSL4Q14641 139 aa9.64□□□□□ -0.87
YBX3-217ENST00000546164 TBCEQ15813 527 aaPredicted RBP9.64□□□□□ -0.87
YBX3-217ENST00000546164 MPV17LQ2QL34 196 aa9.64□□□□□ -0.87
YBX3-217ENST00000546164 SLC22A6Q4U2R8 563 aa9.64□□□□□ -0.87
YBX3-217ENST00000546164 PAN3Q58A45 887 aaKnown RBP9.64□□□□□ -0.87
YBX3-217ENST00000546164 KRBOX4Q5JUW0 171 aa9.64□□□□□ -0.87
YBX3-217ENST00000546164 HEPN1Q6WQI6 88 aa9.64□□□□□ -0.87
YBX3-217ENST00000546164 GDPGP1Q6ZNW5 385 aa9.64□□□□□ -0.87
YBX3-217ENST00000546164 TRAPPC6BQ86SZ2 158 aa9.64□□□□□ -0.87
YBX3-217ENST00000546164 JAGN1Q8N5M9 183 aa9.64□□□□□ -0.87
YBX3-217ENST00000546164 C17orf50Q8WW18 174 aa9.64□□□□□ -0.87
YBX3-217ENST00000546164 MUL1Q969V5 352 aa9.64□□□□□ -0.87
YBX3-217ENST00000546164 NR1H4Q96RI1 486 aaPredicted RBP9.64□□□□□ -0.87
YBX3-217ENST00000546164 TMED9Q9BVK6 235 aa9.64□□□□□ -0.87
YBX3-217ENST00000546164 BARHL1Q9BZE3 327 aa9.64□□□□□ -0.87
YBX3-217ENST00000546164 LINC00574Q9H8X3 128 aa9.64□□□□□ -0.87
YBX3-217ENST00000546164 OR6C3Q9NZP0 311 aa9.64□□□□□ -0.87
YBX3-217ENST00000546164 C1RLQ9NZP8 487 aa9.64□□□□□ -0.87
YBX3-217ENST00000546164 MRPS28Q9Y2Q9 187 aaKnown RBP9.64□□□□□ -0.87
YBX3-217ENST00000546164 MMP24Q9Y5R2 645 aa9.64□□□□□ -0.87
YBX3-217ENST00000546164 A0A1B0GUS0 222 aa9.63□□□□□ -0.87
YBX3-217ENST00000546164 POM121CA8CG34 1229 aa9.63□□□□□ -0.87
YBX3-217ENST00000546164 VGLL3A8MV65 326 aa9.63□□□□□ -0.87
YBX3-217ENST00000546164 GEMIN2O14893 280 aaKnown RBP9.63□□□□□ -0.87
YBX3-217ENST00000546164 DENRO43583 198 aaKnown RBP9.63□□□□□ -0.87
YBX3-217ENST00000546164 MRPS14O60783 128 aaKnown RBP9.63□□□□□ -0.87
YBX3-217ENST00000546164 CRYBA1P05813 215 aa9.63□□□□□ -0.87
YBX3-217ENST00000546164 UCHL1P09936 223 aa9.63□□□□□ -0.87
YBX3-217ENST00000546164 CGB3P0DN86 165 aa9.63□□□□□ -0.87
YBX3-217ENST00000546164 CGB7P0DN87 165 aa9.63□□□□□ -0.87
YBX3-217ENST00000546164 CD37P11049 281 aa9.63□□□□□ -0.87
YBX3-217ENST00000546164 CPEP16870 476 aa9.63□□□□□ -0.87
YBX3-217ENST00000546164 SERPINA2P20848 420 aa9.63□□□□□ -0.87
YBX3-217ENST00000546164 PSMA1P25786 263 aaKnown RBP9.63□□□□□ -0.87
YBX3-217ENST00000546164 CD34P28906 385 aa9.63□□□□□ -0.87
YBX3-217ENST00000546164 LGALS4P56470 323 aa9.63□□□□□ -0.87
YBX3-217ENST00000546164 GABARAPL2P60520 117 aa9.63□□□□□ -0.87
YBX3-217ENST00000546164 RELBQ01201 579 aa9.63□□□□□ -0.87
YBX3-217ENST00000546164 ATXN7L3Q14CW9 347 aaPredicted RBP9.63□□□□□ -0.87
YBX3-217ENST00000546164 TRAM1Q15629 374 aa9.63□□□□□ -0.87
YBX3-217ENST00000546164 MINOS1Q5TGZ0 78 aa9.63□□□□□ -0.87
YBX3-217ENST00000546164 RSBN1Q5VWQ0 802 aaPredicted RBP9.63□□□□□ -0.87
YBX3-217ENST00000546164 LIPKQ5VXJ0 399 aa9.63□□□□□ -0.87
YBX3-217ENST00000546164 OR52W1Q6IF63 320 aa9.63□□□□□ -0.87
YBX3-217ENST00000546164 GLIPR1L1Q6UWM5 242 aa9.63□□□□□ -0.87
YBX3-217ENST00000546164 C3orf56Q8N813 242 aa9.63□□□□□ -0.87
YBX3-217ENST00000546164 OR4D6Q8NGJ1 314 aa9.63□□□□□ -0.87
YBX3-217ENST00000546164 OR4F5Q8NH21 305 aa9.63□□□□□ -0.87
YBX3-217ENST00000546164 FOXRED1Q96CU9 486 aaPredicted RBP9.63□□□□□ -0.87
YBX3-217ENST00000546164 MALSU1Q96EH3 234 aa9.63□□□□□ -0.87
YBX3-217ENST00000546164 MGLLQ99685 303 aa9.63□□□□□ -0.87
YBX3-217ENST00000546164 ZNF747Q9BV97 191 aa9.63□□□□□ -0.87
YBX3-217ENST00000546164 DPCDQ9BVM2 203 aaPredicted RBP9.63□□□□□ -0.87
YBX3-217ENST00000546164 CCDC90BQ9GZT6 254 aa9.63□□□□□ -0.87
YBX3-217ENST00000546164 PPIL3Q9H2H8 161 aaKnown RBP9.63□□□□□ -0.87
YBX3-217ENST00000546164 TMEM133Q9H2Q1 129 aa9.63□□□□□ -0.87
YBX3-217ENST00000546164 Q9H521 79 aa9.63□□□□□ -0.87
YBX3-217ENST00000546164 TNFRSF19Q9NS68 423 aa9.63□□□□□ -0.87
YBX3-217ENST00000546164 RCC2Q9P258 522 aaKnown RBP9.63□□□□□ -0.87
YBX3-217ENST00000546164 GHRLQ9UBU3 117 aa9.63□□□□□ -0.87
YBX3-217ENST00000546164 MINOS1-NBL1R4GNA1 71 aa9.63□□□□□ -0.87
YBX3-217ENST00000546164 A0A087X0M5 115 aa9.62□□□□□ -0.87
YBX3-217ENST00000546164 IGHV2-26A0A0B4J1V2 119 aa9.62□□□□□ -0.87
YBX3-217ENST00000546164 KBTBD11-OT1A0A1B0GTJ5 212 aa9.62□□□□□ -0.87
YBX3-217ENST00000546164 A0A1B0GX30 115 aa9.62□□□□□ -0.87
YBX3-217ENST00000546164 A0A1W2PP11 408 aa9.62□□□□□ -0.87
YBX3-217ENST00000546164 FAM90A10PA6NDY2 464 aa9.62□□□□□ -0.87
YBX3-217ENST00000546164 FAM90A18PA6NE21 464 aa9.62□□□□□ -0.87
YBX3-217ENST00000546164 FAM90A16PA6NEW6 464 aa9.62□□□□□ -0.87
YBX3-217ENST00000546164 FAM90A20PA6NIJ5 464 aa9.62□□□□□ -0.87
YBX3-217ENST00000546164 FAM90A7PA6NKC0 464 aa9.62□□□□□ -0.87
YBX3-217ENST00000546164 ZNF729A6NN14 1252 aaPredicted RBP9.62□□□□□ -0.87
YBX3-217ENST00000546164 FAM90A22PA8MWA6 464 aa9.62□□□□□ -0.87
YBX3-217ENST00000546164 FAM90A12PA8MX19 464 aa9.62□□□□□ -0.87
YBX3-217ENST00000546164 FAM90A5PA8MXJ8 464 aa9.62□□□□□ -0.87
YBX3-217ENST00000546164 FAM90A23PA8MXZ1 464 aa9.62□□□□□ -0.87
YBX3-217ENST00000546164 HSPB6O14558 160 aa9.62□□□□□ -0.87
YBX3-217ENST00000546164 MMP23AO75900 390 aa9.62□□□□□ -0.87
YBX3-217ENST00000546164 OR7C1O76099 320 aaPredicted RBP9.62□□□□□ -0.87
YBX3-217ENST00000546164 ARG1P05089 322 aa9.62□□□□□ -0.87
YBX3-217ENST00000546164 FAM90A15PP0C7V4 464 aa9.62□□□□□ -0.87
YBX3-217ENST00000546164 FAM90A13PP0C7W8 464 aa9.62□□□□□ -0.87
YBX3-217ENST00000546164 FAM90A14PP0C7W9 464 aa9.62□□□□□ -0.87
YBX3-217ENST00000546164 FAM90A24PP0C7X0 464 aa9.62□□□□□ -0.87
YBX3-217ENST00000546164 SRMP19623 302 aa9.62□□□□□ -0.87
YBX3-217ENST00000546164 CDK2P24941 298 aa9.62□□□□□ -0.87
YBX3-217ENST00000546164 MAP2K4P45985 399 aa9.62□□□□□ -0.87
YBX3-217ENST00000546164 RAG2P55895 527 aa9.62□□□□□ -0.87
YBX3-217ENST00000546164 C17orf58Q2M2W7 97 aa9.62□□□□□ -0.87
YBX3-217ENST00000546164 LRRC75BQ2VPJ9 315 aa9.62□□□□□ -0.87
YBX3-217ENST00000546164 HSD17B12Q53GQ0 312 aa9.62□□□□□ -0.87
YBX3-217ENST00000546164 C1orf100Q5SVJ3 147 aa9.62□□□□□ -0.87
YBX3-217ENST00000546164 LDLRAD2Q5SZI1 272 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms