RNA–Protein interactions for RNA: ENST00000545738.6

LIMS2-217, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 5 BASIC

Gene LIMS2, Length 1,730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-217ENST00000545738 ARHGAP5-AS1Q96IT6 56 aa13.43□□□□□ -0.26
LIMS2-217ENST00000545738 DCUN1D5Q9BTE7 237 aa13.43□□□□□ -0.26
LIMS2-217ENST00000545738 SLIRPQ9GZT3 109 aaKnown RBP13.43□□□□□ -0.26
LIMS2-217ENST00000545738 RHBDL2Q9NX52 303 aa13.43□□□□□ -0.26
LIMS2-217ENST00000545738 GLS2Q9UI32 602 aa13.43□□□□□ -0.26
LIMS2-217ENST00000545738 PEX16Q9Y5Y5 336 aa13.43□□□□□ -0.26
LIMS2-217ENST00000545738 TRAV39A0A0B4J263 110 aa13.42□□□□□ -0.26
LIMS2-217ENST00000545738 IGHV2-70DA0A0C4DH43 119 aa13.42□□□□□ -0.26
LIMS2-217ENST00000545738 SMIM31A0A1B0GVY4 71 aa13.42□□□□□ -0.26
LIMS2-217ENST00000545738 ZNF701M0R085 212 aaPredicted RBP13.42□□□□□ -0.26
LIMS2-217ENST00000545738 MGST3O14880 152 aa13.42□□□□□ -0.26
LIMS2-217ENST00000545738 PDCD6O75340 191 aa13.42□□□□□ -0.26
LIMS2-217ENST00000545738 BLVRBP30043 206 aaPredicted RBP13.42□□□□□ -0.26
LIMS2-217ENST00000545738 EDDM3BP56851 147 aa13.42□□□□□ -0.26
LIMS2-217ENST00000545738 CYB5R2Q6BCY4 276 aa13.42□□□□□ -0.26
LIMS2-217ENST00000545738 C1orf229Q6ZS94 237 aaPredicted RBP13.42□□□□□ -0.26
LIMS2-217ENST00000545738 Q71RC1 249 aaPredicted RBP13.42□□□□□ -0.26
LIMS2-217ENST00000545738 CROCCP3Q8IVE0 287 aa13.42□□□□□ -0.26
LIMS2-217ENST00000545738 DTX3Q8N9I9 347 aa13.42□□□□□ -0.26
LIMS2-217ENST00000545738 C8orf46Q8TAG6 207 aa13.42□□□□□ -0.26
LIMS2-217ENST00000545738 PTX4Q96A99 478 aa13.42□□□□□ -0.26
LIMS2-217ENST00000545738 FAAP24Q9BTP7 215 aa13.42□□□□□ -0.26
LIMS2-217ENST00000545738 ZMAT3Q9HA38 289 aaKnown RBP13.42□□□□□ -0.26
LIMS2-217ENST00000545738 ABRACLQ9P1F3 81 aa13.42□□□□□ -0.26
LIMS2-217ENST00000545738 FN1P02751 2386 aaKnown RBP13.42□□□□□ -0.26
LIMS2-217ENST00000545738 UBE2QL1A1L167 161 aa13.42□□□□□ -0.26
LIMS2-217ENST00000545738 CD5LO43866 347 aa13.42□□□□□ -0.26
LIMS2-217ENST00000545738 EIF4EP06730 217 aaKnown RBP13.42□□□□□ -0.26
LIMS2-217ENST00000545738 FUT3P21217 361 aa13.42□□□□□ -0.26
LIMS2-217ENST00000545738 RPL31P62899 125 aaKnown RBP13.42□□□□□ -0.26
LIMS2-217ENST00000545738 PRB3Q04118 309 aaPredicted RBP13.42□□□□□ -0.26
LIMS2-217ENST00000545738 TMEM200BQ69YZ2 307 aa13.42□□□□□ -0.26
LIMS2-217ENST00000545738 C5orf24Q7Z6I8 188 aa13.42□□□□□ -0.26
LIMS2-217ENST00000545738 CMTM4Q8IZR5 234 aa13.42□□□□□ -0.26
LIMS2-217ENST00000545738 C11orf42Q8N5U0 333 aa13.42□□□□□ -0.26
LIMS2-217ENST00000545738 RAB40AQ8WXH6 277 aa13.42□□□□□ -0.26
LIMS2-217ENST00000545738 TSC22D3Q99576 134 aa13.42□□□□□ -0.26
LIMS2-217ENST00000545738 NUDT16L1Q9BRJ7 211 aaKnown RBP13.42□□□□□ -0.26
LIMS2-217ENST00000545738 HDHD3Q9BSH5 251 aaPredicted RBP13.42□□□□□ -0.26
LIMS2-217ENST00000545738 URM1Q9BTM9 101 aaKnown RBP13.42□□□□□ -0.26
LIMS2-217ENST00000545738 MRI1Q9BV20 369 aa13.42□□□□□ -0.26
LIMS2-217ENST00000545738 COMMD3Q9UBI1 195 aa13.42□□□□□ -0.26
LIMS2-217ENST00000545738 INSIG2Q9Y5U4 225 aa13.42□□□□□ -0.26
LIMS2-217ENST00000545738 NOL3O60936 208 aaKnown RBP13.41□□□□□ -0.26
LIMS2-217ENST00000545738 FOSL1P15407 271 aa13.41□□□□□ -0.26
LIMS2-217ENST00000545738 CCL3L1P16619 93 aa13.41□□□□□ -0.26
LIMS2-217ENST00000545738 P2RX3P56373 397 aa13.41□□□□□ -0.26
LIMS2-217ENST00000545738 SCAND1P57086 179 aa13.41□□□□□ -0.26
LIMS2-217ENST00000545738 GDPD3Q7L5L3 318 aa13.41□□□□□ -0.26
LIMS2-217ENST00000545738 SAMD12Q8N8I0 201 aa13.41□□□□□ -0.26
LIMS2-217ENST00000545738 TMPRSS13Q9BYE2 586 aa13.41□□□□□ -0.26
LIMS2-217ENST00000545738 ATG5Q9H1Y0 275 aa13.41□□□□□ -0.26
LIMS2-217ENST00000545738 CCDC59Q9P031 241 aaKnown RBP13.41□□□□□ -0.26
LIMS2-217ENST00000545738 KIF25Q9UIL4 384 aa13.41□□□□□ -0.26
LIMS2-217ENST00000545738 ETV7Q9Y603 341 aa13.41□□□□□ -0.26
LIMS2-217ENST00000545738 KIR2DS1A0A191URI9 304 aa13.4□□□□□ -0.26
LIMS2-217ENST00000545738 HPGDSO60760 199 aa13.4□□□□□ -0.26
LIMS2-217ENST00000545738 GNB3P16520 340 aa13.4□□□□□ -0.26
LIMS2-217ENST00000545738 DVL1P1P54792 670 aaPredicted RBP13.4□□□□□ -0.26
LIMS2-217ENST00000545738 PAX5Q02548 391 aa13.4□□□□□ -0.26
LIMS2-217ENST00000545738 KRBOX4Q5JUW0 171 aa13.4□□□□□ -0.26
LIMS2-217ENST00000545738 Q8N7P7 452 aa13.4□□□□□ -0.26
LIMS2-217ENST00000545738 OR5D13Q8NGL4 314 aa13.4□□□□□ -0.26
LIMS2-217ENST00000545738 OR10R2Q8NGX6 335 aa13.4□□□□□ -0.26
LIMS2-217ENST00000545738 KCTD12Q96CX2 325 aaKnown RBP13.4□□□□□ -0.26
LIMS2-217ENST00000545738 PECRQ9BY49 303 aa13.4□□□□□ -0.26
LIMS2-217ENST00000545738 MIXL1Q9H2W2 232 aa13.4□□□□□ -0.26
LIMS2-217ENST00000545738 OPN4Q9UHM6 478 aa13.4□□□□□ -0.26
LIMS2-217ENST00000545738 HIVEP2P31629 2446 aa13.4□□□□□ -0.26
LIMS2-217ENST00000545738 NIPBLQ6KC79 2804 aaeCLIP13.39□□□□□ -0.27
LIMS2-217ENST00000545738 PPIAL4CA0A0B4J2A2 164 aa13.39□□□□□ -0.27
LIMS2-217ENST00000545738 MFNGO00587 321 aa13.39□□□□□ -0.27
LIMS2-217ENST00000545738 CTDSP2O14595 271 aa13.39□□□□□ -0.27
LIMS2-217ENST00000545738 GPR37O15354 613 aa13.39□□□□□ -0.27
LIMS2-217ENST00000545738 PPIAL4GP0DN37 164 aa13.39□□□□□ -0.27
LIMS2-217ENST00000545738 PTHLHP12272 177 aa13.39□□□□□ -0.27
LIMS2-217ENST00000545738 MMP9P14780 707 aa13.39□□□□□ -0.27
LIMS2-217ENST00000545738 ERP29P30040 261 aaKnown RBP13.39□□□□□ -0.27
LIMS2-217ENST00000545738 DLX6P56179 175 aa13.39□□□□□ -0.27
LIMS2-217ENST00000545738 PAX8Q06710 450 aa13.39□□□□□ -0.27
LIMS2-217ENST00000545738 UTF1Q5T230 341 aa13.39□□□□□ -0.27
LIMS2-217ENST00000545738 ZNF497Q6ZNH5 498 aa13.39□□□□□ -0.27
LIMS2-217ENST00000545738 IZUMO1Q8IYV9 350 aa13.39□□□□□ -0.27
LIMS2-217ENST00000545738 FAM185AQ8N0U4 392 aa13.39□□□□□ -0.27
LIMS2-217ENST00000545738 GAPTQ8N292 157 aa13.39□□□□□ -0.27
LIMS2-217ENST00000545738 OR56B1Q8NGI3 324 aa13.39□□□□□ -0.27
LIMS2-217ENST00000545738 OR13A1Q8NGR1 328 aa13.39□□□□□ -0.27
LIMS2-217ENST00000545738 DGCR14Q96DF8 476 aaKnown RBP13.39□□□□□ -0.27
LIMS2-217ENST00000545738 AK3Q9UIJ7 227 aa13.39□□□□□ -0.27
LIMS2-217ENST00000545738 A0A075B6Q4 140 aa13.39□□□□□ -0.27
LIMS2-217ENST00000545738 TRAV20A0A0B4J274 112 aa13.39□□□□□ -0.27
LIMS2-217ENST00000545738 ODAMA1E959 279 aa13.39□□□□□ -0.27
LIMS2-217ENST00000545738 TMEM127O75204 238 aa13.39□□□□□ -0.27
LIMS2-217ENST00000545738 ELK1P19419 428 aa13.39□□□□□ -0.27
LIMS2-217ENST00000545738 CDK2P24941 298 aa13.39□□□□□ -0.27
LIMS2-217ENST00000545738 ARF6P62330 175 aa13.39□□□□□ -0.27
LIMS2-217ENST00000545738 MADCAM1Q13477 382 aa13.39□□□□□ -0.27
LIMS2-217ENST00000545738 DCAF12L2Q5VW00 463 aa13.39□□□□□ -0.27
LIMS2-217ENST00000545738 FAHD2BQ6P2I3 314 aaPredicted RBP13.39□□□□□ -0.27
LIMS2-217ENST00000545738 Q6ZTK2 550 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms