RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 EWSR1Q01844 656 aaKnown RBP eCLIP10.98□□□□□ -0.65
COL4A6-209ENST00000545689 SPINK14Q6IE38 97 aa10.98□□□□□ -0.65
COL4A6-209ENST00000545689 SMIM10Q96HG1 83 aa10.98□□□□□ -0.65
COL4A6-209ENST00000545689 VAMP8Q9BV40 100 aa10.98□□□□□ -0.65
COL4A6-209ENST00000545689 GHITMQ9H3K2 345 aa10.98□□□□□ -0.65
COL4A6-209ENST00000545689 PATE4P0C8F1 98 aa10.98□□□□□ -0.65
COL4A6-209ENST00000545689 ZPLD1Q8TCW7 415 aa10.98□□□□□ -0.65
COL4A6-209ENST00000545689 MRPL24Q96A35 216 aaKnown RBP10.98□□□□□ -0.65
COL4A6-209ENST00000545689 TRMT61AQ96FX7 289 aaKnown RBP10.98□□□□□ -0.65
COL4A6-209ENST00000545689 LYRM2Q9NU23 88 aaPredicted RBP10.98□□□□□ -0.65
COL4A6-209ENST00000545689 VAX2Q9UIW0 290 aa10.98□□□□□ -0.65
COL4A6-209ENST00000545689 ARL2-SNX15V9GYD0 113 aa10.98□□□□□ -0.65
COL4A6-209ENST00000545689 FAM90A10PA6NDY2 464 aa10.98□□□□□ -0.65
COL4A6-209ENST00000545689 FAM90A18PA6NE21 464 aa10.98□□□□□ -0.65
COL4A6-209ENST00000545689 FAM90A16PA6NEW6 464 aa10.98□□□□□ -0.65
COL4A6-209ENST00000545689 FAM90A20PA6NIJ5 464 aa10.98□□□□□ -0.65
COL4A6-209ENST00000545689 FAM90A8PA6NJQ4 464 aa10.98□□□□□ -0.65
COL4A6-209ENST00000545689 FAM90A7PA6NKC0 464 aa10.98□□□□□ -0.65
COL4A6-209ENST00000545689 FAM90A22PA8MWA6 464 aa10.98□□□□□ -0.65
COL4A6-209ENST00000545689 FAM90A12PA8MX19 464 aa10.98□□□□□ -0.65
COL4A6-209ENST00000545689 FAM90A5PA8MXJ8 464 aa10.98□□□□□ -0.65
COL4A6-209ENST00000545689 FAM90A23PA8MXZ1 464 aa10.98□□□□□ -0.65
COL4A6-209ENST00000545689 PITX3O75364 302 aa10.98□□□□□ -0.65
COL4A6-209ENST00000545689 FAM90A15PP0C7V4 464 aa10.98□□□□□ -0.65
COL4A6-209ENST00000545689 FAM90A13PP0C7W8 464 aa10.98□□□□□ -0.65
COL4A6-209ENST00000545689 FAM90A14PP0C7W9 464 aa10.98□□□□□ -0.65
COL4A6-209ENST00000545689 FAM90A24PP0C7X0 464 aa10.98□□□□□ -0.65
COL4A6-209ENST00000545689 OR2M7Q8NG81 312 aa10.98□□□□□ -0.65
COL4A6-209ENST00000545689 GMPPAQ96IJ6 420 aaPredicted RBP10.98□□□□□ -0.65
COL4A6-209ENST00000545689 PGLYRP3Q96LB9 341 aa10.98□□□□□ -0.65
COL4A6-209ENST00000545689 TECRQ9NZ01 308 aaKnown RBP10.98□□□□□ -0.65
COL4A6-209ENST00000545689 TRBV5-7A0A0A0MS05 114 aa10.98□□□□□ -0.65
COL4A6-209ENST00000545689 M0QZ24 198 aa10.98□□□□□ -0.65
COL4A6-209ENST00000545689 TMEM11P17152 192 aa10.98□□□□□ -0.65
COL4A6-209ENST00000545689 EFNB2P52799 333 aa10.98□□□□□ -0.65
COL4A6-209ENST00000545689 PAX5Q02548 391 aa10.98□□□□□ -0.65
COL4A6-209ENST00000545689 ASCL5Q7RTU5 278 aa10.98□□□□□ -0.65
COL4A6-209ENST00000545689 ANGPTL4Q9BY76 406 aa10.98□□□□□ -0.65
COL4A6-209ENST00000545689 DEFB108AA8MXU0 73 aa10.97□□□□□ -0.65
COL4A6-209ENST00000545689 AP4M1O00189 453 aa10.97□□□□□ -0.65
COL4A6-209ENST00000545689 FABP4P15090 132 aa10.97□□□□□ -0.65
COL4A6-209ENST00000545689 ADAD2Q8NCV1 583 aaKnown RBP10.97□□□□□ -0.65
COL4A6-209ENST00000545689 CHST1O43916 411 aa10.97□□□□□ -0.65
COL4A6-209ENST00000545689 MMP7P09237 267 aaPredicted RBP10.97□□□□□ -0.65
COL4A6-209ENST00000545689 KRTDAPP60985 99 aa10.97□□□□□ -0.65
COL4A6-209ENST00000545689 SNRPEP62304 92 aaKnown RBP10.97□□□□□ -0.65
COL4A6-209ENST00000545689 AWAT1Q58HT5 328 aa10.97□□□□□ -0.65
COL4A6-209ENST00000545689 C1orf100Q5SVJ3 147 aa10.97□□□□□ -0.65
COL4A6-209ENST00000545689 FHL5Q5TD97 284 aa10.97□□□□□ -0.65
COL4A6-209ENST00000545689 FAM24BQ8N5W8 94 aa10.97□□□□□ -0.65
COL4A6-209ENST00000545689 DTD1Q8TEA8 209 aa10.97□□□□□ -0.65
COL4A6-209ENST00000545689 ABHD14BQ96IU4 210 aa10.97□□□□□ -0.65
COL4A6-209ENST00000545689 CCL2P13500 99 aa10.97□□□□□ -0.65
COL4A6-209ENST00000545689 RBM11P57052 281 aaKnown RBP10.97□□□□□ -0.65
COL4A6-209ENST00000545689 FA2HQ7L5A8 372 aa10.97□□□□□ -0.65
COL4A6-209ENST00000545689 FAM181AQ8N9Y4 354 aa10.97□□□□□ -0.65
COL4A6-209ENST00000545689 MRPL22Q9NWU5 206 aaKnown RBP10.97□□□□□ -0.65
COL4A6-209ENST00000545689 IL36GQ9NZH8 169 aa10.97□□□□□ -0.65
COL4A6-209ENST00000545689 KLK10O43240 276 aa10.97□□□□□ -0.65
COL4A6-209ENST00000545689 SLC25A5P05141 298 aaKnown RBP10.97□□□□□ -0.65
COL4A6-209ENST00000545689 PRSS53Q2L4Q9 553 aa10.97□□□□□ -0.65
COL4A6-209ENST00000545689 BSXQ3C1V8 233 aa10.97□□□□□ -0.65
COL4A6-209ENST00000545689 SLC25A22Q9H936 323 aa10.97□□□□□ -0.65
COL4A6-209ENST00000545689 THYN1Q9P016 225 aa10.97□□□□□ -0.65
COL4A6-209ENST00000545689 MRPS18BQ9Y676 258 aaKnown RBP10.97□□□□□ -0.65
COL4A6-209ENST00000545689 IGHMP01871 453 aa10.97□□□□□ -0.65
COL4A6-209ENST00000545689 CCKARP32238 428 aa10.97□□□□□ -0.65
COL4A6-209ENST00000545689 MAGEA5P43359 124 aa10.97□□□□□ -0.65
COL4A6-209ENST00000545689 MRPS11P82912 194 aaKnown RBP10.97□□□□□ -0.65
COL4A6-209ENST00000545689 PLAC9Q5JTB6 97 aa10.97□□□□□ -0.65
COL4A6-209ENST00000545689 ONECUT1Q9UBC0 465 aa10.97□□□□□ -0.65
COL4A6-209ENST00000545689 PRNDQ9UKY0 176 aa10.97□□□□□ -0.65
COL4A6-209ENST00000545689 PDE6DO43924 150 aa10.96□□□□□ -0.65
COL4A6-209ENST00000545689 A0A1W2PR80 420 aa10.96□□□□□ -0.65
COL4A6-209ENST00000545689 GATCO43716 136 aaKnown RBP10.96□□□□□ -0.65
COL4A6-209ENST00000545689 GAPDHP04406 335 aaKnown RBP10.96□□□□□ -0.65
COL4A6-209ENST00000545689 IGLV3-21P80748 117 aaPredicted RBP10.96□□□□□ -0.65
COL4A6-209ENST00000545689 SRSF5Q13243 272 aaKnown RBP10.96□□□□□ -0.65
COL4A6-209ENST00000545689 UNQ9370/PRO34162Q6UXP9 181 aa10.96□□□□□ -0.65
COL4A6-209ENST00000545689 MRGPRGQ86SM5 289 aa10.96□□□□□ -0.65
COL4A6-209ENST00000545689 VASH2Q86V25 355 aa10.96□□□□□ -0.65
COL4A6-209ENST00000545689 RFESDQ8TAC1 157 aa10.96□□□□□ -0.65
COL4A6-209ENST00000545689 SLC22A18ASQ8N1D0 253 aa10.96□□□□□ -0.65
COL4A6-209ENST00000545689 MISP3Q96FF7 219 aa10.96□□□□□ -0.65
COL4A6-209ENST00000545689 C1QCP02747 245 aa10.96□□□□□ -0.66
COL4A6-209ENST00000545689 RBP4P02753 201 aa10.96□□□□□ -0.66
COL4A6-209ENST00000545689 SIGLEC14Q08ET2 396 aa10.96□□□□□ -0.66
COL4A6-209ENST00000545689 SPEM2Q0P670 501 aa10.96□□□□□ -0.66
COL4A6-209ENST00000545689 OVCH2Q7RTZ1 564 aa10.96□□□□□ -0.66
COL4A6-209ENST00000545689 RNF122Q9H9V4 155 aa10.96□□□□□ -0.66
COL4A6-209ENST00000545689 CCL28Q9NRJ3 127 aa10.96□□□□□ -0.66
COL4A6-209ENST00000545689 NAT8BQ9UHF3 227 aa10.96□□□□□ -0.66
COL4A6-209ENST00000545689 ZMIZ1Q9ULJ6 1067 aa10.96□□□□□ -0.66
COL4A6-209ENST00000545689 PHOX2AO14813 284 aa10.96□□□□□ -0.66
COL4A6-209ENST00000545689 IL9P15248 144 aa10.96□□□□□ -0.66
COL4A6-209ENST00000545689 SOX8P57073 446 aa10.96□□□□□ -0.66
COL4A6-209ENST00000545689 FBXW9Q5XUX1 488 aa10.96□□□□□ -0.66
COL4A6-209ENST00000545689 OR10D4PQ8NGN7 298 aa10.96□□□□□ -0.66
COL4A6-209ENST00000545689 KCNK17Q96T54 332 aa10.96□□□□□ -0.66
COL4A6-209ENST00000545689 CD81P60033 236 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms