RNA–Protein interactions for RNA: ENST00000545608.5

USP28-215, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 733 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-215ENST00000545608 OAZ3Q9UMX2 235 aa6.76□□□□□ -1.33
USP28-215ENST00000545608 UBE2J1Q9Y385 318 aaPredicted RBP6.76□□□□□ -1.33
USP28-215ENST00000545608 TRGV10A0A0A0MS01 117 aa6.75□□□□□ -1.33
USP28-215ENST00000545608 SH2D7A6NKC9 451 aaPredicted RBP6.75□□□□□ -1.33
USP28-215ENST00000545608 SAC3D1A6NKF1 404 aa6.75□□□□□ -1.33
USP28-215ENST00000545608 H3BNX3 289 aa6.75□□□□□ -1.33
USP28-215ENST00000545608 J3QRE1 110 aa6.75□□□□□ -1.33
USP28-215ENST00000545608 SH2D1BO14796 132 aa6.75□□□□□ -1.33
USP28-215ENST00000545608 KDM4BO94953 1096 aa6.75□□□□□ -1.33
USP28-215ENST00000545608 IGLV1-47P01700 117 aa6.75□□□□□ -1.33
USP28-215ENST00000545608 AMY1AP04745 511 aa6.75□□□□□ -1.33
USP28-215ENST00000545608 AMY2AP04746 511 aa6.75□□□□□ -1.33
USP28-215ENST00000545608 ALDOBP05062 364 aa6.75□□□□□ -1.33
USP28-215ENST00000545608 ISG15P05161 165 aa6.75□□□□□ -1.33
USP28-215ENST00000545608 LPLP06858 475 aa6.75□□□□□ -1.33
USP28-215ENST00000545608 H2AFB1P0C5Y9 115 aa6.75□□□□□ -1.33
USP28-215ENST00000545608 H2AFB2P0C5Z0 115 aa6.75□□□□□ -1.33
USP28-215ENST00000545608 FCGR1AP12314 374 aa6.75□□□□□ -1.33
USP28-215ENST00000545608 ZNF20P17024 532 aa6.75□□□□□ -1.33
USP28-215ENST00000545608 FSTP19883 344 aa6.75□□□□□ -1.33
USP28-215ENST00000545608 LMO1P25800 156 aa6.75□□□□□ -1.33
USP28-215ENST00000545608 CD34P28906 385 aa6.75□□□□□ -1.33
USP28-215ENST00000545608 CDC42P60953 191 aa6.75□□□□□ -1.33
USP28-215ENST00000545608 BDH1Q02338 343 aa6.75□□□□□ -1.33
USP28-215ENST00000545608 IL18R1Q13478 541 aa6.75□□□□□ -1.33
USP28-215ENST00000545608 ABCA11PQ4W5N1 156 aa6.75□□□□□ -1.33
USP28-215ENST00000545608 SPIN3Q5JUX0 258 aa6.75□□□□□ -1.33
USP28-215ENST00000545608 OR52W1Q6IF63 320 aa6.75□□□□□ -1.33
USP28-215ENST00000545608 ZFP1Q6P2D0 407 aa6.75□□□□□ -1.33
USP28-215ENST00000545608 Q6P435 159 aa6.75□□□□□ -1.33
USP28-215ENST00000545608 C10orf99Q6UWK7 81 aa6.75□□□□□ -1.33
USP28-215ENST00000545608 HEPN1Q6WQI6 88 aa6.75□□□□□ -1.33
USP28-215ENST00000545608 C16orf82Q7Z2V1 217 aa6.75□□□□□ -1.33
USP28-215ENST00000545608 CENPVQ7Z7K6 275 aaPredicted RBP6.75□□□□□ -1.33
USP28-215ENST00000545608 RTN4RL2Q86UN3 420 aa6.75□□□□□ -1.33
USP28-215ENST00000545608 OR51A4Q8NGJ6 313 aa6.75□□□□□ -1.33
USP28-215ENST00000545608 OR5D18Q8NGL1 313 aa6.75□□□□□ -1.33
USP28-215ENST00000545608 RFKQ969G6 155 aa6.75□□□□□ -1.33
USP28-215ENST00000545608 SPSB1Q96BD6 273 aa6.75□□□□□ -1.33
USP28-215ENST00000545608 RNFT2Q96EX2 444 aa6.75□□□□□ -1.33
USP28-215ENST00000545608 CENPNQ96H22 339 aaPredicted RBP6.75□□□□□ -1.33
USP28-215ENST00000545608 COQ2Q96H96 371 aa6.75□□□□□ -1.33
USP28-215ENST00000545608 HRASLS5Q96KN8 279 aa6.75□□□□□ -1.33
USP28-215ENST00000545608 OPALINQ96PE5 141 aa6.75□□□□□ -1.33
USP28-215ENST00000545608 SLC25A33Q9BSK2 321 aa6.75□□□□□ -1.33
USP28-215ENST00000545608 COMMD4Q9H0A8 199 aa6.75□□□□□ -1.33
USP28-215ENST00000545608 ZNF286AQ9HBT8 521 aa6.75□□□□□ -1.33
USP28-215ENST00000545608 S100A14Q9HCY8 104 aa6.75□□□□□ -1.33
USP28-215ENST00000545608 TPSG1Q9NRR2 321 aa6.75□□□□□ -1.33
USP28-215ENST00000545608 ERVK13-1Q9NX77 482 aa6.75□□□□□ -1.33
USP28-215ENST00000545608 ING3Q9NXR8 418 aa6.75□□□□□ -1.33
USP28-215ENST00000545608 TAS2R3Q9NYW6 316 aa6.75□□□□□ -1.33
USP28-215ENST00000545608 AASSQ9UDR5 926 aa6.75□□□□□ -1.33
USP28-215ENST00000545608 HHLA2Q9UM44 414 aa6.75□□□□□ -1.33
USP28-215ENST00000545608 ZNF281Q9Y2X9 895 aa6.75□□□□□ -1.33
USP28-215ENST00000545608 DSCAML1Q8TD84 2053 aa6.74□□□□□ -1.33
USP28-215ENST00000545608 TCRBV4S1A1TA0A5B7 111 aa6.74□□□□□ -1.33
USP28-215ENST00000545608 DAPL1A0PJW8 107 aa6.74□□□□□ -1.33
USP28-215ENST00000545608 ODAMA1E959 279 aa6.74□□□□□ -1.33
USP28-215ENST00000545608 FUOMA2VDF0 154 aa6.74□□□□□ -1.33
USP28-215ENST00000545608 OR4C45A6NMZ5 311 aa6.74□□□□□ -1.33
USP28-215ENST00000545608 LEUTXA8MZ59 168 aa6.74□□□□□ -1.33
USP28-215ENST00000545608 E9PQ18 207 aa6.74□□□□□ -1.33
USP28-215ENST00000545608 LY6LH3BQJ8 138 aa6.74□□□□□ -1.33
USP28-215ENST00000545608 H3BUI4 141 aa6.74□□□□□ -1.33
USP28-215ENST00000545608 J3QLW9 94 aa6.74□□□□□ -1.33
USP28-215ENST00000545608 SLC16A6O15403 523 aa6.74□□□□□ -1.33
USP28-215ENST00000545608 DENRO43583 198 aaKnown RBP6.74□□□□□ -1.33
USP28-215ENST00000545608 MT-ND2P03891 347 aa6.74□□□□□ -1.33
USP28-215ENST00000545608 HTR1AP08908 422 aa6.74□□□□□ -1.33
USP28-215ENST00000545608 OCM2P0CE71 109 aa6.74□□□□□ -1.33
USP28-215ENST00000545608 OCMP0CE72 109 aaPredicted RBP6.74□□□□□ -1.33
USP28-215ENST00000545608 ZNF44P15621 663 aa6.74□□□□□ -1.33
USP28-215ENST00000545608 ZNF19P17023 458 aa6.74□□□□□ -1.33
USP28-215ENST00000545608 BRS3P32247 399 aa6.74□□□□□ -1.33
USP28-215ENST00000545608 CCR9P51686 369 aa6.74□□□□□ -1.33
USP28-215ENST00000545608 SCN1BQ07699 218 aa6.74□□□□□ -1.33
USP28-215ENST00000545608 CBX3Q13185 183 aa6.74□□□□□ -1.33
USP28-215ENST00000545608 ALKBH1Q13686 389 aaKnown RBP6.74□□□□□ -1.33
USP28-215ENST00000545608 C17orf58Q2M2W7 97 aa6.74□□□□□ -1.33
USP28-215ENST00000545608 HLA-DRB5Q30154 266 aa6.74□□□□□ -1.33
USP28-215ENST00000545608 TPTE2P1Q5T6R2 138 aa6.74□□□□□ -1.33
USP28-215ENST00000545608 KCTD20Q7Z5Y7 419 aa6.74□□□□□ -1.33
USP28-215ENST00000545608 OR13C3Q8NGS6 347 aa6.74□□□□□ -1.33
USP28-215ENST00000545608 OR13C9Q8NGT0 318 aa6.74□□□□□ -1.33
USP28-215ENST00000545608 ZNF596Q8TC21 504 aa6.74□□□□□ -1.33
USP28-215ENST00000545608 TRUB1Q8WWH5 349 aaKnown RBP6.74□□□□□ -1.33
USP28-215ENST00000545608 MYDGFQ969H8 173 aa6.74□□□□□ -1.33
USP28-215ENST00000545608 PELI1Q96FA3 418 aa6.74□□□□□ -1.33
USP28-215ENST00000545608 RBM14Q96PK6 669 aaKnown RBP6.74□□□□□ -1.33
USP28-215ENST00000545608 GAL3ST2Q9H3Q3 398 aa6.74□□□□□ -1.33
USP28-215ENST00000545608 PLGRKTQ9HBL7 147 aa6.74□□□□□ -1.33
USP28-215ENST00000545608 A0A087X0M5 115 aa6.73□□□□□ -1.33
USP28-215ENST00000545608 A0A1B0GVG6 124 aa6.73□□□□□ -1.33
USP28-215ENST00000545608 A0A1B0GX30 115 aa6.73□□□□□ -1.33
USP28-215ENST00000545608 BUB1B-PAK6H3BSN5 160 aa6.73□□□□□ -1.33
USP28-215ENST00000545608 SLC33A1O00400 549 aaPredicted RBP6.73□□□□□ -1.33
USP28-215ENST00000545608 TOR1AO14656 332 aa6.73□□□□□ -1.33
USP28-215ENST00000545608 DEGS1O15121 323 aa6.73□□□□□ -1.33
USP28-215ENST00000545608 ATP6V1G1O75348 118 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms