RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, human

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG1-223	ENST00000545440	TINAGL1	Q9GZM7	467 aa	Predicted RBP	6.23	□□□□□ -1.41
SNHG1-223	ENST00000545440	HMG20A	Q9NP66	347 aa		6.23	□□□□□ -1.41
SNHG1-223	ENST00000545440	ZKSCAN7	Q9P0L1	754 aa	Predicted RBP	6.23	□□□□□ -1.41
SNHG1-223	ENST00000545440	IL36RN	Q9UBH0	155 aa		6.23	□□□□□ -1.41
SNHG1-223	ENST00000545440	GLS2	Q9UI32	602 aa		6.23	□□□□□ -1.41
SNHG1-223	ENST00000545440	DHDH	Q9UQ10	334 aa		6.23	□□□□□ -1.41
SNHG1-223	ENST00000545440	TBL2	Q9Y4P3	447 aa	Known RBP	6.23	□□□□□ -1.41
SNHG1-223	ENST00000545440	PCDHGB5	Q9Y5G0	923 aa		6.23	□□□□□ -1.41
SNHG1-223	ENST00000545440	LINC00312	Q9Y6C7	94 aa		6.23	□□□□□ -1.41
SNHG1-223	ENST00000545440	PLXNB1	O43157	2135 aa		6.22	□□□□□ -1.41
SNHG1-223	ENST00000545440	IGKV1-12	A0A0C4DH73	117 aa		6.22	□□□□□ -1.41
SNHG1-223	ENST00000545440	GAGE12B	A1L429	117 aa		6.22	□□□□□ -1.41
SNHG1-223	ENST00000545440	GAGE12H	A6NDE8	117 aa		6.22	□□□□□ -1.41
SNHG1-223	ENST00000545440	VGLL3	A8MV65	326 aa		6.22	□□□□□ -1.41
SNHG1-223	ENST00000545440	ODF3B	A8MYP8	253 aa		6.22	□□□□□ -1.41
SNHG1-223	ENST00000545440		E9PI62	339 aa		6.22	□□□□□ -1.41
SNHG1-223	ENST00000545440		H3BUX3	64 aa		6.22	□□□□□ -1.41
SNHG1-223	ENST00000545440	MGST3	O14880	152 aa		6.22	□□□□□ -1.41
SNHG1-223	ENST00000545440	TSPAN9	O75954	239 aa		6.22	□□□□□ -1.41
SNHG1-223	ENST00000545440	CLPX	O76031	633 aa		6.22	□□□□□ -1.41
SNHG1-223	ENST00000545440	IGKV1D-12	P01611	117 aa		6.22	□□□□□ -1.41
SNHG1-223	ENST00000545440	CSN2	P05814	226 aa		6.22	□□□□□ -1.41
SNHG1-223	ENST00000545440	CD2	P06729	351 aa		6.22	□□□□□ -1.41
SNHG1-223	ENST00000545440	HCK	P08631	526 aa		6.22	□□□□□ -1.41
SNHG1-223	ENST00000545440	IGHV1-8	P0DP01	117 aa		6.22	□□□□□ -1.41
SNHG1-223	ENST00000545440	MYL12A	P19105	171 aa		6.22	□□□□□ -1.41
SNHG1-223	ENST00000545440	GABRR1	P24046	479 aa		6.22	□□□□□ -1.41
SNHG1-223	ENST00000545440	COX7A1	P24310	79 aa		6.22	□□□□□ -1.41
SNHG1-223	ENST00000545440	ERP29	P30040	261 aa	Known RBP	6.22	□□□□□ -1.41
SNHG1-223	ENST00000545440	OR3A1	P47881	315 aa		6.22	□□□□□ -1.41
SNHG1-223	ENST00000545440	BMX	P51813	675 aa		6.22	□□□□□ -1.41
SNHG1-223	ENST00000545440	ZP1	P60852	638 aa		6.22	□□□□□ -1.41
SNHG1-223	ENST00000545440	EDDM3A	Q14507	147 aa		6.22	□□□□□ -1.41
SNHG1-223	ENST00000545440	CDK5R1	Q15078	307 aa		6.22	□□□□□ -1.41
SNHG1-223	ENST00000545440	KISS1	Q15726	138 aa		6.22	□□□□□ -1.41
SNHG1-223	ENST00000545440	SMN1	Q16637	294 aa	Known RBP	6.22	□□□□□ -1.41
SNHG1-223	ENST00000545440	LRRC36	Q1X8D7	754 aa		6.22	□□□□□ -1.41
SNHG1-223	ENST00000545440	ZNF626	Q68DY1	528 aa		6.22	□□□□□ -1.41
SNHG1-223	ENST00000545440	RPL22L1	Q6P5R6	122 aa	Known RBP	6.22	□□□□□ -1.41
SNHG1-223	ENST00000545440	CRIP3	Q6Q6R5	217 aa		6.22	□□□□□ -1.41
SNHG1-223	ENST00000545440	TMPRSS11A	Q6ZMR5	421 aa		6.22	□□□□□ -1.41
SNHG1-223	ENST00000545440	ZNF782	Q6ZMW2	699 aa	Predicted RBP	6.22	□□□□□ -1.41
SNHG1-223	ENST00000545440		Q6ZSV7	163 aa		6.22	□□□□□ -1.41
SNHG1-223	ENST00000545440	CHST4	Q8NCG5	386 aa		6.22	□□□□□ -1.41
SNHG1-223	ENST00000545440	OR11H6	Q8NGC7	330 aa		6.22	□□□□□ -1.41
SNHG1-223	ENST00000545440	OR52N4	Q8NGI2	321 aa		6.22	□□□□□ -1.41
SNHG1-223	ENST00000545440	OR5D18	Q8NGL1	313 aa		6.22	□□□□□ -1.41
SNHG1-223	ENST00000545440	OR13D1	Q8NGV5	346 aa		6.22	□□□□□ -1.41
SNHG1-223	ENST00000545440	LINC01006	Q8NI28	216 aa		6.22	□□□□□ -1.41
SNHG1-223	ENST00000545440	CNIH3	Q8TBE1	160 aa		6.22	□□□□□ -1.41
SNHG1-223	ENST00000545440	C17orf50	Q8WW18	174 aa		6.22	□□□□□ -1.41
SNHG1-223	ENST00000545440	RGP1	Q92546	391 aa	Predicted RBP	6.22	□□□□□ -1.41
SNHG1-223	ENST00000545440	RFT1	Q96AA3	541 aa		6.22	□□□□□ -1.41
SNHG1-223	ENST00000545440	SMIM19	Q96E16	107 aa		6.22	□□□□□ -1.41
SNHG1-223	ENST00000545440	SPACA5	Q96QH8	159 aa		6.22	□□□□□ -1.41
SNHG1-223	ENST00000545440	SSX3	Q99909	188 aa		6.22	□□□□□ -1.41
SNHG1-223	ENST00000545440	CITED1	Q99966	193 aa		6.22	□□□□□ -1.41
SNHG1-223	ENST00000545440	C16orf95	Q9H693	158 aa		6.22	□□□□□ -1.41
SNHG1-223	ENST00000545440	RANBP3	Q9H6Z4	567 aa	Predicted RBP	6.22	□□□□□ -1.41
SNHG1-223	ENST00000545440	RAB18	Q9NP72	206 aa		6.22	□□□□□ -1.41
SNHG1-223	ENST00000545440	EXOSC4	Q9NPD3	245 aa	Known RBP	6.22	□□□□□ -1.41
SNHG1-223	ENST00000545440	DIMT1	Q9UNQ2	313 aa	Known RBP	6.22	□□□□□ -1.41
SNHG1-223	ENST00000545440	EXOSC1	Q9Y3B2	195 aa	Known RBP	6.22	□□□□□ -1.41
SNHG1-223	ENST00000545440	HSPE1-MOB4	S4R3N1	261 aa		6.22	□□□□□ -1.41
SNHG1-223	ENST00000545440	TRRAP	Q9Y4A5	3859 aa		6.22	□□□□□ -1.41
SNHG1-223	ENST00000545440	PKD1L1	Q8TDX9	2849 aa		6.21	□□□□□ -1.42
SNHG1-223	ENST00000545440	KRTAP23-1	A1A580	65 aa		6.21	□□□□□ -1.42
SNHG1-223	ENST00000545440	FUOM	A2VDF0	154 aa		6.21	□□□□□ -1.42
SNHG1-223	ENST00000545440	FAM90A8P	A6NJQ4	464 aa		6.21	□□□□□ -1.42
SNHG1-223	ENST00000545440	SH2D1B	O14796	132 aa		6.21	□□□□□ -1.42
SNHG1-223	ENST00000545440	CASQ2	O14958	399 aa	Predicted RBP	6.21	□□□□□ -1.42
SNHG1-223	ENST00000545440	CLIC3	O95833	236 aa		6.21	□□□□□ -1.42
SNHG1-223	ENST00000545440	OR2H2	O95918	312 aa		6.21	□□□□□ -1.42
SNHG1-223	ENST00000545440	RAB3A	P20336	220 aa		6.21	□□□□□ -1.42
SNHG1-223	ENST00000545440	LMO1	P25800	156 aa		6.21	□□□□□ -1.42
SNHG1-223	ENST00000545440	DUSP1	P28562	367 aa		6.21	□□□□□ -1.42
SNHG1-223	ENST00000545440	ETV1	P50549	477 aa		6.21	□□□□□ -1.42
SNHG1-223	ENST00000545440	GTF2A1	P52655	376 aa	Predicted RBP	6.21	□□□□□ -1.42
SNHG1-223	ENST00000545440	P2RX3	P56373	397 aa		6.21	□□□□□ -1.42
SNHG1-223	ENST00000545440	PROK1	P58294	105 aa		6.21	□□□□□ -1.42
SNHG1-223	ENST00000545440	ADARB1	P78563	741 aa	Known RBP	6.21	□□□□□ -1.42
SNHG1-223	ENST00000545440	MED21	Q13503	144 aa		6.21	□□□□□ -1.42
SNHG1-223	ENST00000545440	ICAM4	Q14773	271 aa		6.21	□□□□□ -1.42
SNHG1-223	ENST00000545440	XAF1	Q6GPH4	301 aa		6.21	□□□□□ -1.42
SNHG1-223	ENST00000545440	ELP2	Q6IA86	826 aa		6.21	□□□□□ -1.42
SNHG1-223	ENST00000545440	ASPHD2	Q6ICH7	369 aa		6.21	□□□□□ -1.42
SNHG1-223	ENST00000545440	DHRSX	Q8N5I4	330 aa		6.21	□□□□□ -1.42
SNHG1-223	ENST00000545440	PXT1	Q8NFP0	134 aa		6.21	□□□□□ -1.42
SNHG1-223	ENST00000545440	OR4S1	Q8NGB4	309 aa		6.21	□□□□□ -1.42
SNHG1-223	ENST00000545440	OR52N1	Q8NH53	320 aa		6.21	□□□□□ -1.42
SNHG1-223	ENST00000545440	GPR148	Q8TDV2	347 aa		6.21	□□□□□ -1.42
SNHG1-223	ENST00000545440	CYGB	Q8WWM9	190 aa		6.21	□□□□□ -1.42
SNHG1-223	ENST00000545440	TMEM106A	Q96A25	262 aa		6.21	□□□□□ -1.42
SNHG1-223	ENST00000545440	CDCA4	Q9BXL8	241 aa		6.21	□□□□□ -1.42
SNHG1-223	ENST00000545440	CHST6	Q9GZX3	395 aa		6.21	□□□□□ -1.42
SNHG1-223	ENST00000545440	GAL3ST2	Q9H3Q3	398 aa		6.21	□□□□□ -1.42
SNHG1-223	ENST00000545440	GSTK1	Q9Y2Q3	226 aa		6.21	□□□□□ -1.42
SNHG1-223	ENST00000545440	UBE2J1	Q9Y385	318 aa	Predicted RBP	6.21	□□□□□ -1.42
SNHG1-223	ENST00000545440	SESN1	Q9Y6P5	492 aa		6.21	□□□□□ -1.42
SNHG1-223	ENST00000545440	TRGV10	A0A0A0MS01	117 aa		6.2	□□□□□ -1.42

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