RNA–Protein interactions for RNA: ENST00000544669.5

CPSF7-223, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,800 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-223ENST00000544669 OR52M1Q8NGK5 317 aa11.2□□□□□ -0.62
CPSF7-223ENST00000544669 OR8U1Q8NH10 309 aa11.2□□□□□ -0.62
CPSF7-223ENST00000544669 TP53RKQ96S44 253 aa11.2□□□□□ -0.62
CPSF7-223ENST00000544669 RNF150Q9ULK6 438 aa11.2□□□□□ -0.62
CPSF7-223ENST00000544669 FAM221AA4D161 298 aa11.19□□□□□ -0.62
CPSF7-223ENST00000544669 CD300LBA8K4G0 201 aa11.19□□□□□ -0.62
CPSF7-223ENST00000544669 NPIPB11E5RHQ5 1161 aa11.19□□□□□ -0.62
CPSF7-223ENST00000544669 AGPAT2O15120 278 aa11.19□□□□□ -0.62
CPSF7-223ENST00000544669 DEGS1O15121 323 aa11.19□□□□□ -0.62
CPSF7-223ENST00000544669 SIGLEC5O15389 551 aa11.19□□□□□ -0.62
CPSF7-223ENST00000544669 PRKACAP17612 351 aa11.19□□□□□ -0.62
CPSF7-223ENST00000544669 CCNOP22674 350 aa11.19□□□□□ -0.62
CPSF7-223ENST00000544669 PPT1P50897 306 aa11.19□□□□□ -0.62
CPSF7-223ENST00000544669 RPL23AP62750 156 aaKnown RBP11.19□□□□□ -0.62
CPSF7-223ENST00000544669 PLGLB1Q02325 96 aa11.19□□□□□ -0.62
CPSF7-223ENST00000544669 TLE4Q04727 773 aa11.19□□□□□ -0.62
CPSF7-223ENST00000544669 SIGLEC14Q08ET2 396 aa11.19□□□□□ -0.62
CPSF7-223ENST00000544669 SPINK14Q6IE38 97 aa11.19□□□□□ -0.62
CPSF7-223ENST00000544669 TIPARPQ7Z3E1 657 aaKnown RBP11.19□□□□□ -0.62
CPSF7-223ENST00000544669 OR10J5Q8NHC4 309 aa11.19□□□□□ -0.62
CPSF7-223ENST00000544669 SECTM1Q8WVN6 248 aa11.19□□□□□ -0.62
CPSF7-223ENST00000544669 OR5P3Q8WZ94 311 aa11.19□□□□□ -0.62
CPSF7-223ENST00000544669 SLAMF9Q96A28 289 aa11.19□□□□□ -0.62
CPSF7-223ENST00000544669 RBMXL1Q96E39 390 aaKnown RBP11.19□□□□□ -0.62
CPSF7-223ENST00000544669 LOXL4Q96JB6 756 aa11.19□□□□□ -0.62
CPSF7-223ENST00000544669 POM121L2Q96KW2 1035 aa11.19□□□□□ -0.62
CPSF7-223ENST00000544669 RAB40CQ96S21 281 aa11.19□□□□□ -0.62
CPSF7-223ENST00000544669 LHX6Q9UPM6 363 aa11.19□□□□□ -0.62
CPSF7-223ENST00000544669 CEACAM1P13688 526 aa11.19□□□□□ -0.62
CPSF7-223ENST00000544669 NPBWR2P48146 333 aa11.19□□□□□ -0.62
CPSF7-223ENST00000544669 GPM6AP51674 278 aa11.19□□□□□ -0.62
CPSF7-223ENST00000544669 OR1C1Q15619 314 aa11.19□□□□□ -0.62
CPSF7-223ENST00000544669 IGSF11Q5DX21 431 aa11.19□□□□□ -0.62
CPSF7-223ENST00000544669 SHEQ5VZ18 495 aa11.19□□□□□ -0.62
CPSF7-223ENST00000544669 BRICD5Q6PL45 260 aa11.19□□□□□ -0.62
CPSF7-223ENST00000544669 STX12Q86Y82 276 aa11.19□□□□□ -0.62
CPSF7-223ENST00000544669 TUSC5Q8IXB3 177 aa11.19□□□□□ -0.62
CPSF7-223ENST00000544669 IL22RA1Q8N6P7 574 aa11.19□□□□□ -0.62
CPSF7-223ENST00000544669 TCEAL7Q9BRU2 100 aa11.19□□□□□ -0.62
CPSF7-223ENST00000544669 C11orf1Q9H5F2 150 aa11.19□□□□□ -0.62
CPSF7-223ENST00000544669 CALHM2Q9HA72 323 aa11.19□□□□□ -0.62
CPSF7-223ENST00000544669 RPS10P5Q9NQ39 176 aa11.19□□□□□ -0.62
CPSF7-223ENST00000544669 POLDIP2Q9Y2S7 368 aa11.19□□□□□ -0.62
CPSF7-223ENST00000544669 OR2W1Q9Y3N9 320 aa11.19□□□□□ -0.62
CPSF7-223ENST00000544669 NCOA6Q14686 2063 aaPredicted RBP11.18□□□□□ -0.62
CPSF7-223ENST00000544669 NKX2-6A6NCS4 301 aa11.18□□□□□ -0.62
CPSF7-223ENST00000544669 SLC22A20A6NK97 555 aa11.18□□□□□ -0.62
CPSF7-223ENST00000544669 COLCA2A8K830 154 aa11.18□□□□□ -0.62
CPSF7-223ENST00000544669 K7N7A8 449 aa11.18□□□□□ -0.62
CPSF7-223ENST00000544669 S100A8P05109 93 aa11.18□□□□□ -0.62
CPSF7-223ENST00000544669 CRYBA1P05813 215 aa11.18□□□□□ -0.62
CPSF7-223ENST00000544669 PTAFRP25105 342 aa11.18□□□□□ -0.62
CPSF7-223ENST00000544669 LMO1P25800 156 aa11.18□□□□□ -0.62
CPSF7-223ENST00000544669 CLN3Q13286 438 aa11.18□□□□□ -0.62
CPSF7-223ENST00000544669 NUFIP2Q7Z417 695 aaKnown RBP11.18□□□□□ -0.62
CPSF7-223ENST00000544669 GAPTQ8N292 157 aa11.18□□□□□ -0.62
CPSF7-223ENST00000544669 TMEM252Q8N6L7 170 aa11.18□□□□□ -0.62
CPSF7-223ENST00000544669 OR11L1Q8NGX0 322 aa11.18□□□□□ -0.62
CPSF7-223ENST00000544669 OR2G3Q8NGZ4 309 aa11.18□□□□□ -0.62
CPSF7-223ENST00000544669 RXFP4Q8TDU9 374 aa11.18□□□□□ -0.62
CPSF7-223ENST00000544669 TTTY12Q9BZ98 90 aa11.18□□□□□ -0.62
CPSF7-223ENST00000544669 WFDC1Q9HC57 220 aa11.18□□□□□ -0.62
CPSF7-223ENST00000544669 GLRX2Q9NS18 164 aa11.18□□□□□ -0.62
CPSF7-223ENST00000544669 KIAA1456Q9P272 454 aa11.18□□□□□ -0.62
CPSF7-223ENST00000544669 PINLYPA6NC86 204 aa11.17□□□□□ -0.62
CPSF7-223ENST00000544669 RNF212BA8MTL3 300 aa11.17□□□□□ -0.62
CPSF7-223ENST00000544669 NME2P1O60361 137 aa11.17□□□□□ -0.62
CPSF7-223ENST00000544669 IFNA5P01569 189 aa11.17□□□□□ -0.62
CPSF7-223ENST00000544669 S100A6P06703 90 aa11.17□□□□□ -0.62
CPSF7-223ENST00000544669 SERPINE2P07093 398 aa11.17□□□□□ -0.62
CPSF7-223ENST00000544669 F2RP25116 425 aa11.17□□□□□ -0.62
CPSF7-223ENST00000544669 NHLH2Q02577 135 aa11.17□□□□□ -0.62
CPSF7-223ENST00000544669 SRYQ05066 204 aa11.17□□□□□ -0.62
CPSF7-223ENST00000544669 NMSQ5H8A3 153 aa11.17□□□□□ -0.62
CPSF7-223ENST00000544669 DCAF10Q5QP82 559 aa11.17□□□□□ -0.62
CPSF7-223ENST00000544669 ZNF880Q6PDB4 577 aa11.17□□□□□ -0.62
CPSF7-223ENST00000544669 FAM58AQ8N1B3 248 aa11.17□□□□□ -0.62
CPSF7-223ENST00000544669 HSD17B11Q8NBQ5 300 aa11.17□□□□□ -0.62
CPSF7-223ENST00000544669 HPSE2Q8WWQ2 592 aa11.17□□□□□ -0.62
CPSF7-223ENST00000544669 DYRK2Q92630 601 aa11.17□□□□□ -0.62
CPSF7-223ENST00000544669 LSM10Q969L4 123 aaKnown RBP11.17□□□□□ -0.62
CPSF7-223ENST00000544669 CABLES2Q9BTV7 478 aa11.17□□□□□ -0.62
CPSF7-223ENST00000544669 RTL8AQ9BWD3 113 aa11.17□□□□□ -0.62
CPSF7-223ENST00000544669 MTCH1Q9NZJ7 389 aa11.17□□□□□ -0.62
CPSF7-223ENST00000544669 J3QT63 122 aa11.16□□□□□ -0.62
CPSF7-223ENST00000544669 M0R036 132 aa11.16□□□□□ -0.62
CPSF7-223ENST00000544669 HLA-HP01893 362 aa11.16□□□□□ -0.62
CPSF7-223ENST00000544669 CD46P15529 392 aa11.16□□□□□ -0.62
CPSF7-223ENST00000544669 SELEP16581 610 aa11.16□□□□□ -0.62
CPSF7-223ENST00000544669 ITGA3P26006 1051 aa11.16□□□□□ -0.62
CPSF7-223ENST00000544669 HLA-DRB3P79483 266 aa11.16□□□□□ -0.62
CPSF7-223ENST00000544669 CLINT1Q14677 625 aa11.16□□□□□ -0.62
CPSF7-223ENST00000544669 SLC10A1Q14973 349 aa11.16□□□□□ -0.62
CPSF7-223ENST00000544669 SOHLH1Q5JUK2 328 aa11.16□□□□□ -0.62
CPSF7-223ENST00000544669 AKR1C8PQ5T2L2 129 aa11.16□□□□□ -0.62
CPSF7-223ENST00000544669 FIP1L1Q6UN15 594 aaKnown RBP11.16□□□□□ -0.62
CPSF7-223ENST00000544669 ZNF818PQ6ZRF7 136 aa11.16□□□□□ -0.62
CPSF7-223ENST00000544669 SUMF2Q8NBJ7 301 aa11.16□□□□□ -0.62
CPSF7-223ENST00000544669 NAXEQ8NCW5 288 aa11.16□□□□□ -0.62
CPSF7-223ENST00000544669 ADAT1Q9BUB4 502 aaKnown RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms