RNA–Protein interactions for RNA: ENST00000544622.4

YBX3-216, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-216ENST00000544622 RSBN1Q5VWQ0 802 aaPredicted RBP9.25□□□□□ -0.93
YBX3-216ENST00000544622 BAIAP2L2Q6UXY1 529 aa9.25□□□□□ -0.93
YBX3-216ENST00000544622 GDPGP1Q6ZNW5 385 aa9.25□□□□□ -0.93
YBX3-216ENST00000544622 PRSS48Q7RTY5 328 aa9.25□□□□□ -0.93
YBX3-216ENST00000544622 OSR2Q8N2R0 312 aa9.25□□□□□ -0.93
YBX3-216ENST00000544622 THRSPQ92748 146 aa9.25□□□□□ -0.93
YBX3-216ENST00000544622 MALSU1Q96EH3 234 aa9.25□□□□□ -0.93
YBX3-216ENST00000544622 NR1H4Q96RI1 486 aaPredicted RBP9.25□□□□□ -0.93
YBX3-216ENST00000544622 SSX3Q99909 188 aa9.25□□□□□ -0.93
YBX3-216ENST00000544622 FAM192AQ9GZU8 254 aa9.25□□□□□ -0.93
YBX3-216ENST00000544622 SLITRK2Q9H156 845 aa9.25□□□□□ -0.93
YBX3-216ENST00000544622 PPIL3Q9H2H8 161 aaKnown RBP9.25□□□□□ -0.93
YBX3-216ENST00000544622 TMEM133Q9H2Q1 129 aa9.25□□□□□ -0.93
YBX3-216ENST00000544622 ISYNA1Q9NPH2 558 aa9.25□□□□□ -0.93
YBX3-216ENST00000544622 RAB26Q9ULW5 256 aa9.25□□□□□ -0.93
YBX3-216ENST00000544622 ING4Q9UNL4 249 aa9.25□□□□□ -0.93
YBX3-216ENST00000544622 TRGV10A0A0A0MS01 117 aa9.24□□□□□ -0.93
YBX3-216ENST00000544622 IGHV2-26A0A0B4J1V2 119 aa9.24□□□□□ -0.93
YBX3-216ENST00000544622 GEMIN2O14893 280 aaKnown RBP9.24□□□□□ -0.93
YBX3-216ENST00000544622 RGS10O43665 173 aa9.24□□□□□ -0.93
YBX3-216ENST00000544622 TSPAN9O75954 239 aa9.24□□□□□ -0.93
YBX3-216ENST00000544622 CLPXO76031 633 aa9.24□□□□□ -0.93
YBX3-216ENST00000544622 HTR3BO95264 441 aa9.24□□□□□ -0.93
YBX3-216ENST00000544622 IGLV1-47P01700 117 aa9.24□□□□□ -0.93
YBX3-216ENST00000544622 MAS1P04201 325 aa9.24□□□□□ -0.93
YBX3-216ENST00000544622 CRYBA1P05813 215 aa9.24□□□□□ -0.93
YBX3-216ENST00000544622 MAPK3P27361 379 aaPredicted RBP9.24□□□□□ -0.93
YBX3-216ENST00000544622 CD34P28906 385 aa9.24□□□□□ -0.93
YBX3-216ENST00000544622 GDNFP39905 211 aa9.24□□□□□ -0.93
YBX3-216ENST00000544622 RAG2P55895 527 aa9.24□□□□□ -0.93
YBX3-216ENST00000544622 RBM11P57052 281 aaKnown RBP9.24□□□□□ -0.93
YBX3-216ENST00000544622 ATXN7L3Q14CW9 347 aaPredicted RBP9.24□□□□□ -0.93
YBX3-216ENST00000544622 MED22Q15528 200 aa9.24□□□□□ -0.93
YBX3-216ENST00000544622 SHISA2Q6UWI4 295 aa9.24□□□□□ -0.93
YBX3-216ENST00000544622 Q6ZSV7 163 aa9.24□□□□□ -0.93
YBX3-216ENST00000544622 LINC00596Q86U02 117 aa9.24□□□□□ -0.93
YBX3-216ENST00000544622 LRRTM1Q86UE6 522 aa9.24□□□□□ -0.93
YBX3-216ENST00000544622 OR4D6Q8NGJ1 314 aa9.24□□□□□ -0.93
YBX3-216ENST00000544622 OR4F5Q8NH21 305 aa9.24□□□□□ -0.93
YBX3-216ENST00000544622 LINC01006Q8NI28 216 aa9.24□□□□□ -0.93
YBX3-216ENST00000544622 MRPS24Q96EL2 167 aaKnown RBP9.24□□□□□ -0.93
YBX3-216ENST00000544622 UQCC2Q9BRT2 126 aa9.24□□□□□ -0.93
YBX3-216ENST00000544622 BARHL1Q9BZE3 327 aa9.24□□□□□ -0.93
YBX3-216ENST00000544622 GAL3ST2Q9H3Q3 398 aa9.24□□□□□ -0.93
YBX3-216ENST00000544622 C16orf95Q9H693 158 aa9.24□□□□□ -0.93
YBX3-216ENST00000544622 KBTBD11-OT1A0A1B0GTJ5 212 aa9.23□□□□□ -0.93
YBX3-216ENST00000544622 CLPSL1A2RUU4 121 aa9.23□□□□□ -0.93
YBX3-216ENST00000544622 ZNF729A6NN14 1252 aaPredicted RBP9.23□□□□□ -0.93
YBX3-216ENST00000544622 NPIPB11E5RHQ5 1161 aa9.23□□□□□ -0.93
YBX3-216ENST00000544622 H3BUX3 64 aa9.23□□□□□ -0.93
YBX3-216ENST00000544622 CSTBP04080 98 aaKnown RBP9.23□□□□□ -0.93
YBX3-216ENST00000544622 ARG1P05089 322 aa9.23□□□□□ -0.93
YBX3-216ENST00000544622 GTF2F2P13984 249 aa9.23□□□□□ -0.93
YBX3-216ENST00000544622 SERPINA2P20848 420 aa9.23□□□□□ -0.93
YBX3-216ENST00000544622 CDK2P24941 298 aa9.23□□□□□ -0.93
YBX3-216ENST00000544622 DYNLT3P51808 116 aa9.23□□□□□ -0.93
YBX3-216ENST00000544622 LGALS4P56470 323 aa9.23□□□□□ -0.93
YBX3-216ENST00000544622 PROK1P58294 105 aa9.23□□□□□ -0.93
YBX3-216ENST00000544622 GPR176Q14439 515 aa9.23□□□□□ -0.93
YBX3-216ENST00000544622 MPV17LQ2QL34 196 aa9.23□□□□□ -0.93
YBX3-216ENST00000544622 LRRC75BQ2VPJ9 315 aa9.23□□□□□ -0.93
YBX3-216ENST00000544622 PAN3Q58A45 887 aaKnown RBP9.23□□□□□ -0.93
YBX3-216ENST00000544622 RBM48Q5RL73 367 aaKnown RBP9.23□□□□□ -0.93
YBX3-216ENST00000544622 UTF1Q5T230 341 aa9.23□□□□□ -0.93
YBX3-216ENST00000544622 FAM27D1Q5T7N8 215 aa9.23□□□□□ -0.93
YBX3-216ENST00000544622 MINOS1Q5TGZ0 78 aa9.23□□□□□ -0.93
YBX3-216ENST00000544622 GLIPR1L1Q6UWM5 242 aa9.23□□□□□ -0.93
YBX3-216ENST00000544622 TMEM91Q6ZNR0 172 aa9.23□□□□□ -0.93
YBX3-216ENST00000544622 RTN4RL2Q86UN3 420 aa9.23□□□□□ -0.93
YBX3-216ENST00000544622 NKAIN3Q8N8D7 197 aa9.23□□□□□ -0.93
YBX3-216ENST00000544622 ZNF565Q8N9K5 539 aa9.23□□□□□ -0.93
YBX3-216ENST00000544622 SUMF2Q8NBJ7 301 aa9.23□□□□□ -0.93
YBX3-216ENST00000544622 OR4P4Q8NGL7 312 aa9.23□□□□□ -0.93
YBX3-216ENST00000544622 OR13A1Q8NGR1 328 aa9.23□□□□□ -0.93
YBX3-216ENST00000544622 PLPPR1Q8TBJ4 325 aa9.23□□□□□ -0.93
YBX3-216ENST00000544622 MUL1Q969V5 352 aa9.23□□□□□ -0.93
YBX3-216ENST00000544622 CNBD2Q96M20 576 aa9.23□□□□□ -0.93
YBX3-216ENST00000544622 DPCDQ9BVM2 203 aaPredicted RBP9.23□□□□□ -0.93
YBX3-216ENST00000544622 CLEC7AQ9BXN2 247 aa9.23□□□□□ -0.93
YBX3-216ENST00000544622 BEX1Q9HBH7 125 aa9.23□□□□□ -0.93
YBX3-216ENST00000544622 PCDHB16Q9NRJ7 776 aa9.23□□□□□ -0.93
YBX3-216ENST00000544622 OR6C3Q9NZP0 311 aa9.23□□□□□ -0.93
YBX3-216ENST00000544622 RCC2Q9P258 522 aaKnown RBP9.23□□□□□ -0.93
YBX3-216ENST00000544622 MRPS28Q9Y2Q9 187 aaKnown RBP9.23□□□□□ -0.93
YBX3-216ENST00000544622 MINOS1-NBL1R4GNA1 71 aa9.23□□□□□ -0.93
YBX3-216ENST00000544622 MGAM2Q2M2H8 2515 aa9.22□□□□□ -0.93
YBX3-216ENST00000544622 BTBD17A6NE02 478 aa9.22□□□□□ -0.93
YBX3-216ENST00000544622 DENRO43583 198 aaKnown RBP9.22□□□□□ -0.93
YBX3-216ENST00000544622 OR7C1O76099 320 aaPredicted RBP9.22□□□□□ -0.93
YBX3-216ENST00000544622 UCHL1P09936 223 aa9.22□□□□□ -0.93
YBX3-216ENST00000544622 CPEP16870 476 aa9.22□□□□□ -0.93
YBX3-216ENST00000544622 SRMP19623 302 aa9.22□□□□□ -0.93
YBX3-216ENST00000544622 VHLP40337 213 aa9.22□□□□□ -0.93
YBX3-216ENST00000544622 MLLT11Q13015 90 aaPredicted RBP9.22□□□□□ -0.93
YBX3-216ENST00000544622 SSX2Q16385 188 aa9.22□□□□□ -0.93
YBX3-216ENST00000544622 SLC22A6Q4U2R8 563 aa9.22□□□□□ -0.93
YBX3-216ENST00000544622 PRAMEF5Q5TYX0 476 aa9.22□□□□□ -0.93
YBX3-216ENST00000544622 LIPKQ5VXJ0 399 aa9.22□□□□□ -0.93
YBX3-216ENST00000544622 OLFML2AQ68BL7 652 aa9.22□□□□□ -0.93
YBX3-216ENST00000544622 SLC35E4Q6ICL7 350 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms