RNA–Protein interactions for RNA: ENST00000544301.6

VIM-209, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best)

Gene VIM, Length 2,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-209ENST00000544301 RND3P61587 244 aa15.39■□□□□ 0.05
VIM-209ENST00000544301 TBC1D26Q86UD7 250 aa15.39■□□□□ 0.05
VIM-209ENST00000544301 UBAC2Q8NBM4 344 aa15.39■□□□□ 0.05
VIM-209ENST00000544301 OR4D5Q8NGN0 318 aa15.39■□□□□ 0.05
VIM-209ENST00000544301 TSNAXQ99598 290 aaKnown RBP15.39■□□□□ 0.05
VIM-209ENST00000544301 ZDHHC8Q9ULC8 765 aa15.39■□□□□ 0.05
VIM-209ENST00000544301 ATP23Q9Y6H3 246 aa15.39■□□□□ 0.05
VIM-209ENST00000544301 IGKV1-6A0A0C4DH72 117 aa15.38■□□□□ 0.05
VIM-209ENST00000544301 KIR2DS1A0A191URI9 304 aa15.38■□□□□ 0.05
VIM-209ENST00000544301 TUSC2O75896 110 aa15.38■□□□□ 0.05
VIM-209ENST00000544301 GLAP06280 429 aa15.38■□□□□ 0.05
VIM-209ENST00000544301 CA6P23280 308 aa15.38■□□□□ 0.05
VIM-209ENST00000544301 IL32P24001 234 aa15.38■□□□□ 0.05
VIM-209ENST00000544301 KIR2DS4P43632 304 aa15.38■□□□□ 0.05
VIM-209ENST00000544301 SOX8P57073 446 aa15.38■□□□□ 0.05
VIM-209ENST00000544301 SRPXP78539 464 aa15.38■□□□□ 0.05
VIM-209ENST00000544301 IL24Q13007 206 aa15.38■□□□□ 0.05
VIM-209ENST00000544301 IL13RA2Q14627 380 aa15.38■□□□□ 0.05
VIM-209ENST00000544301 KIR2DS1Q14954 304 aa15.38■□□□□ 0.05
VIM-209ENST00000544301 SPATA46Q5T0L3 261 aa15.38■□□□□ 0.05
VIM-209ENST00000544301 C10orf91Q5T1B1 145 aa15.38■□□□□ 0.05
VIM-209ENST00000544301 ZNF565Q8N9K5 539 aa15.38■□□□□ 0.05
VIM-209ENST00000544301 USB1Q9BQ65 265 aaKnown RBP15.38■□□□□ 0.05
VIM-209ENST00000544301 SPACA1Q9HBV2 294 aa15.38■□□□□ 0.05
VIM-209ENST00000544301 ZNF175Q9Y473 711 aa15.38■□□□□ 0.05
VIM-209ENST00000544301 IGKV1D-13A0A0B4J2D9 117 aa15.38■□□□□ 0.05
VIM-209ENST00000544301 FAM74A7A6NL05 159 aa15.38■□□□□ 0.05
VIM-209ENST00000544301 TRIM77I1YAP6 450 aa15.38■□□□□ 0.05
VIM-209ENST00000544301 ST8SIA3O43173 380 aa15.38■□□□□ 0.05
VIM-209ENST00000544301 IGKV1-13P0DP09 117 aa15.38■□□□□ 0.05
VIM-209ENST00000544301 P2RY1P47900 373 aa15.38■□□□□ 0.05
VIM-209ENST00000544301 PMP22Q01453 160 aa15.38■□□□□ 0.05
VIM-209ENST00000544301 FAM74A3Q4VXF1 159 aa15.38■□□□□ 0.05
VIM-209ENST00000544301 SPIN3Q5JUX0 258 aa15.38■□□□□ 0.05
VIM-209ENST00000544301 GPR157Q5UAW9 335 aa15.38■□□□□ 0.05
VIM-209ENST00000544301 ZNF818PQ6ZRF7 136 aa15.38■□□□□ 0.05
VIM-209ENST00000544301 VASH2Q86V25 355 aa15.38■□□□□ 0.05
VIM-209ENST00000544301 FAM58AQ8N1B3 248 aa15.38■□□□□ 0.05
VIM-209ENST00000544301 MRPL30Q8TCC3 161 aaKnown RBP15.38■□□□□ 0.05
VIM-209ENST00000544301 GTF3AQ92664 365 aaKnown RBP15.38■□□□□ 0.05
VIM-209ENST00000544301 ARV1Q9H2C2 271 aa15.38■□□□□ 0.05
VIM-209ENST00000544301 OR51I2Q9H344 312 aa15.38■□□□□ 0.05
VIM-209ENST00000544301 TMEM231Q9H6L2 316 aa15.38■□□□□ 0.05
VIM-209ENST00000544301 TREM1Q9NP99 234 aa15.38■□□□□ 0.05
VIM-209ENST00000544301 TRAV24A0A0B4J272 114 aa15.37■□□□□ 0.05
VIM-209ENST00000544301 C3orf80F5H4A9 247 aa15.37■□□□□ 0.05
VIM-209ENST00000544301 GPR31O00270 319 aa15.37■□□□□ 0.05
VIM-209ENST00000544301 CTXN2P0C2S0 81 aa15.37■□□□□ 0.05
VIM-209ENST00000544301 TNFSF10P50591 281 aa15.37■□□□□ 0.05
VIM-209ENST00000544301 CAV2P51636 162 aa15.37■□□□□ 0.05
VIM-209ENST00000544301 GUCA2BQ16661 112 aa15.37■□□□□ 0.05
VIM-209ENST00000544301 C20orf204Q6ZNR8 217 aa15.37■□□□□ 0.05
VIM-209ENST00000544301 GAPTQ8N292 157 aa15.37■□□□□ 0.05
VIM-209ENST00000544301 C17orf78Q8N4C9 275 aa15.37■□□□□ 0.05
VIM-209ENST00000544301 DMBX1Q8NFW5 382 aa15.37■□□□□ 0.05
VIM-209ENST00000544301 TMEM56Q96MV1 263 aa15.37■□□□□ 0.05
VIM-209ENST00000544301 PKIBQ9C010 78 aa15.37■□□□□ 0.05
VIM-209ENST00000544301 RIMS4Q9H426 269 aaPredicted RBP15.37■□□□□ 0.05
VIM-209ENST00000544301 RHOFQ9HBH0 211 aa15.37■□□□□ 0.05
VIM-209ENST00000544301 WFDC1Q9HC57 220 aa15.37■□□□□ 0.05
VIM-209ENST00000544301 RCL1Q9Y2P8 373 aaKnown RBP15.37■□□□□ 0.05
VIM-209ENST00000544301 UBE2J1Q9Y385 318 aaPredicted RBP15.37■□□□□ 0.05
VIM-209ENST00000544301 POMT1Q9Y6A1 747 aa15.37■□□□□ 0.05
VIM-209ENST00000544301 TMEM56-RWDD3S4R434 201 aa15.37■□□□□ 0.05
VIM-209ENST00000544301 NKX2-6A6NCS4 301 aa15.37■□□□□ 0.05
VIM-209ENST00000544301 F8W036 122 aa15.37■□□□□ 0.05
VIM-209ENST00000544301 HS3ST1O14792 307 aa15.37■□□□□ 0.05
VIM-209ENST00000544301 BLOC1S1P78537 153 aa15.37■□□□□ 0.05
VIM-209ENST00000544301 IGFBP7Q16270 282 aa15.37■□□□□ 0.05
VIM-209ENST00000544301 BTNL8Q6UX41 500 aa15.37■□□□□ 0.05
VIM-209ENST00000544301 MYPOPQ86VE0 399 aaPredicted RBP15.37■□□□□ 0.05
VIM-209ENST00000544301 PUSL1Q8N0Z8 303 aaKnown RBP15.37■□□□□ 0.05
VIM-209ENST00000544301 SVBPQ8N300 66 aa15.37■□□□□ 0.05
VIM-209ENST00000544301 GMPPAQ96IJ6 420 aaPredicted RBP15.37■□□□□ 0.05
VIM-209ENST00000544301 PARP11Q9NR21 331 aa15.37■□□□□ 0.05
VIM-209ENST00000544301 UQCC1Q9NVA1 299 aa15.37■□□□□ 0.05
VIM-209ENST00000544301 CARHSP1Q9Y2V2 147 aaKnown RBP15.37■□□□□ 0.05
VIM-209ENST00000544301 TRBV6-6A0A0A6YYG2 114 aa15.36■□□□□ 0.05
VIM-209ENST00000544301 RHBDL1O75783 438 aa15.36■□□□□ 0.05
VIM-209ENST00000544301 SLC34A2O95436 690 aa15.36■□□□□ 0.05
VIM-209ENST00000544301 CDS2O95674 445 aa15.36■□□□□ 0.05
VIM-209ENST00000544301 ZNF14P17017 642 aaPredicted RBP15.36■□□□□ 0.05
VIM-209ENST00000544301 TBC1D28Q2M2D7 210 aa15.36■□□□□ 0.05
VIM-209ENST00000544301 RDH5Q92781 318 aa15.36■□□□□ 0.05
VIM-209ENST00000544301 FAM96BQ9Y3D0 163 aa15.36■□□□□ 0.05
VIM-209ENST00000544301 CELA3BP08861 270 aa15.35■□□□□ 0.05
VIM-209ENST00000544301 MUC1P15941 1255 aaPredicted RBP15.35■□□□□ 0.05
VIM-209ENST00000544301 ZNF169Q14929 603 aaPredicted RBP15.35■□□□□ 0.05
VIM-209ENST00000544301 PCSK4Q6UW60 755 aa15.35■□□□□ 0.05
VIM-209ENST00000544301 P4HA3Q7Z4N8 544 aa15.35■□□□□ 0.05
VIM-209ENST00000544301 PIP4P1Q86T03 277 aa15.35■□□□□ 0.05
VIM-209ENST00000544301 ZNF695Q8IW36 515 aa15.35■□□□□ 0.05
VIM-209ENST00000544301 SELENOHQ8IZQ5 122 aaKnown RBP15.35■□□□□ 0.05
VIM-209ENST00000544301 WNT2BQ93097 391 aa15.35■□□□□ 0.05
VIM-209ENST00000544301 GPHA2Q96T91 129 aa15.35■□□□□ 0.05
VIM-209ENST00000544301 TLNRD1Q9H1K6 362 aa15.35■□□□□ 0.05
VIM-209ENST00000544301 J3QT63 122 aa15.35■□□□□ 0.05
VIM-209ENST00000544301 HSD17B6O14756 317 aa15.35■□□□□ 0.05
VIM-209ENST00000544301 IFT22Q9H7X7 185 aa15.35■□□□□ 0.05
VIM-209ENST00000544301 CCL28Q9NRJ3 127 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms