RNA–Protein interactions for RNA: ENST00000543710.5

VPS13D-211, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 5,676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-211ENST00000543710 GZMMP51124 257 aa6.89□□□□□ -1.31
VPS13D-211ENST00000543710 FAM166AQ6J272 317 aa6.89□□□□□ -1.31
VPS13D-211ENST00000543710 INO80CQ6PI98 192 aaPredicted RBP6.89□□□□□ -1.31
VPS13D-211ENST00000543710 WDR89Q96FK6 387 aaPredicted RBP6.89□□□□□ -1.31
VPS13D-211ENST00000543710 FAM210BQ96KR6 192 aa6.89□□□□□ -1.31
VPS13D-211ENST00000543710 MAGT1Q9H0U3 335 aa6.89□□□□□ -1.31
VPS13D-211ENST00000543710 MPTX1A8MV57 137 aa6.89□□□□□ -1.31
VPS13D-211ENST00000543710 FAHP16930 419 aa6.89□□□□□ -1.31
VPS13D-211ENST00000543710 TMEM267Q0VDI3 215 aaPredicted RBP6.89□□□□□ -1.31
VPS13D-211ENST00000543710 FABP9Q0Z7S8 132 aa6.89□□□□□ -1.31
VPS13D-211ENST00000543710 ROBO4Q8WZ75 1007 aa6.89□□□□□ -1.31
VPS13D-211ENST00000543710 C8orf44Q96CB5 159 aa6.89□□□□□ -1.31
VPS13D-211ENST00000543710 ZG16BQ96DA0 208 aa6.89□□□□□ -1.31
VPS13D-211ENST00000543710 ACY3Q96HD9 319 aa6.89□□□□□ -1.31
VPS13D-211ENST00000543710 DCTN5Q9BTE1 182 aa6.89□□□□□ -1.31
VPS13D-211ENST00000543710 SERGEFQ9UGK8 458 aa6.89□□□□□ -1.31
VPS13D-211ENST00000543710 RER1O15258 196 aa6.89□□□□□ -1.31
VPS13D-211ENST00000543710 ADAM20O43506 726 aa6.89□□□□□ -1.31
VPS13D-211ENST00000543710 HIST1H1EP10412 219 aaKnown RBP6.89□□□□□ -1.31
VPS13D-211ENST00000543710 LPAR6P43657 344 aa6.89□□□□□ -1.31
VPS13D-211ENST00000543710 MSRB3Q8IXL7 192 aa6.89□□□□□ -1.31
VPS13D-211ENST00000543710 SAP25Q8TEE9 199 aa6.89□□□□□ -1.31
VPS13D-211ENST00000543710 FAM168AQ92567 244 aa6.89□□□□□ -1.31
VPS13D-211ENST00000543710 PIPOXQ9P0Z9 390 aa6.89□□□□□ -1.31
VPS13D-211ENST00000543710 ELF5Q9UKW6 265 aaPredicted RBP6.89□□□□□ -1.31
VPS13D-211ENST00000543710 SDK1Q7Z5N4 2213 aa6.88□□□□□ -1.31
VPS13D-211ENST00000543710 LOC102723971A0A1B0GUV8 181 aa6.88□□□□□ -1.31
VPS13D-211ENST00000543710 ACAA1P09110 424 aaPredicted RBP6.88□□□□□ -1.31
VPS13D-211ENST00000543710 GNLYP22749 145 aa6.88□□□□□ -1.31
VPS13D-211ENST00000543710 ELOBQ15370 118 aa6.88□□□□□ -1.31
VPS13D-211ENST00000543710 OR5M10Q6IEU7 315 aa6.88□□□□□ -1.31
VPS13D-211ENST00000543710 OR4D10Q8NGI6 311 aa6.88□□□□□ -1.31
VPS13D-211ENST00000543710 DOK4Q8TEW6 326 aa6.88□□□□□ -1.31
VPS13D-211ENST00000543710 CHRNA10Q9GZZ6 450 aa6.88□□□□□ -1.31
VPS13D-211ENST00000543710 TRAV38-1A0A0B4J264 116 aa6.88□□□□□ -1.31
VPS13D-211ENST00000543710 SERTM2A0A1B0GWG4 89 aa6.88□□□□□ -1.31
VPS13D-211ENST00000543710 AKR7A2O43488 359 aa6.88□□□□□ -1.31
VPS13D-211ENST00000543710 CRHP06850 196 aa6.88□□□□□ -1.31
VPS13D-211ENST00000543710 SUCLG1P53597 346 aaKnown RBP6.88□□□□□ -1.31
VPS13D-211ENST00000543710 OR5I1Q13606 314 aa6.88□□□□□ -1.31
VPS13D-211ENST00000543710 BHLHA9Q7RTU4 235 aa6.88□□□□□ -1.31
VPS13D-211ENST00000543710 PRSS33Q8NF86 280 aa6.88□□□□□ -1.31
VPS13D-211ENST00000543710 OR4C5Q8NGB2 326 aa6.88□□□□□ -1.31
VPS13D-211ENST00000543710 OR5A2Q8NGI9 324 aa6.88□□□□□ -1.31
VPS13D-211ENST00000543710 VPS25Q9BRG1 176 aa6.88□□□□□ -1.31
VPS13D-211ENST00000543710 C1QTNF6Q9BXI9 259 aa6.88□□□□□ -1.31
VPS13D-211ENST00000543710 ANXA10Q9UJ72 324 aa6.88□□□□□ -1.31
VPS13D-211ENST00000543710 WSB1Q9Y6I7 421 aa6.88□□□□□ -1.31
VPS13D-211ENST00000543710 ZSWIM8A7E2V4 1837 aa6.88□□□□□ -1.31
VPS13D-211ENST00000543710 PARP14Q460N5 1801 aa6.88□□□□□ -1.31
VPS13D-211ENST00000543710 TRBV5-5A0A0J9YX44 114 aa6.88□□□□□ -1.31
VPS13D-211ENST00000543710 FBLL1A6NHQ2 334 aaKnown RBP6.88□□□□□ -1.31
VPS13D-211ENST00000543710 LIPT2A6NK58 231 aa6.88□□□□□ -1.31
VPS13D-211ENST00000543710 H0Y980 276 aa6.88□□□□□ -1.31
VPS13D-211ENST00000543710 ETHE1O95571 254 aa6.88□□□□□ -1.31
VPS13D-211ENST00000543710 OR5AC1P0C628 307 aa6.88□□□□□ -1.31
VPS13D-211ENST00000543710 DAOP14920 347 aa6.88□□□□□ -1.31
VPS13D-211ENST00000543710 PMELP40967 661 aa6.88□□□□□ -1.31
VPS13D-211ENST00000543710 GFERP55789 205 aa6.88□□□□□ -1.31
VPS13D-211ENST00000543710 RHBDD2Q6NTF9 364 aa6.88□□□□□ -1.31
VPS13D-211ENST00000543710 MAMSTRQ6ZN01 415 aa6.88□□□□□ -1.31
VPS13D-211ENST00000543710 D2HGDHQ8N465 521 aa6.88□□□□□ -1.31
VPS13D-211ENST00000543710 OR10G4Q8NGN3 311 aa6.88□□□□□ -1.31
VPS13D-211ENST00000543710 OR10G9Q8NGN4 311 aa6.88□□□□□ -1.31
VPS13D-211ENST00000543710 OR10G7Q8NGN6 311 aa6.88□□□□□ -1.31
VPS13D-211ENST00000543710 ALG14Q96F25 216 aa6.88□□□□□ -1.31
VPS13D-211ENST00000543710 PLA2G12AQ9BZM1 189 aa6.88□□□□□ -1.31
VPS13D-211ENST00000543710 CISD1Q9NZ45 108 aaKnown RBP6.88□□□□□ -1.31
VPS13D-211ENST00000543710 TNFSF18Q9UNG2 199 aa6.88□□□□□ -1.31
VPS13D-211ENST00000543710 NPTNQ9Y639 398 aa6.88□□□□□ -1.31
VPS13D-211ENST00000543710 BAZ2BQ9UIF8 2168 aaKnown RBP6.88□□□□□ -1.31
VPS13D-211ENST00000543710 CTXND1A0A1B0GTU2 59 aa6.88□□□□□ -1.31
VPS13D-211ENST00000543710 ZC3H12DA2A288 527 aaKnown RBP6.88□□□□□ -1.31
VPS13D-211ENST00000543710 EPOPA6NHQ4 379 aa6.88□□□□□ -1.31
VPS13D-211ENST00000543710 A6NIN4 97 aa6.88□□□□□ -1.31
VPS13D-211ENST00000543710 C1QTNF9BB2RNN3 333 aa6.88□□□□□ -1.31
VPS13D-211ENST00000543710 C1QTNF9P0C862 333 aa6.88□□□□□ -1.31
VPS13D-211ENST00000543710 CCL4P13236 92 aa6.88□□□□□ -1.31
VPS13D-211ENST00000543710 ZNF273Q14593 569 aa6.88□□□□□ -1.31
VPS13D-211ENST00000543710 RFLNAQ6ZTI6 216 aa6.88□□□□□ -1.31
VPS13D-211ENST00000543710 SLC35E3Q7Z769 313 aa6.88□□□□□ -1.31
VPS13D-211ENST00000543710 ST6GAL2Q96JF0 529 aa6.88□□□□□ -1.31
VPS13D-211ENST00000543710 MYO16Q9Y6X6 1858 aa6.88□□□□□ -1.31
VPS13D-211ENST00000543710 IGHV5-10-1A0A0J9YXX1 117 aa6.87□□□□□ -1.31
VPS13D-211ENST00000543710 HSPB1P04792 205 aaKnown RBP6.87□□□□□ -1.31
VPS13D-211ENST00000543710 KLF3P57682 345 aaPredicted RBP6.87□□□□□ -1.31
VPS13D-211ENST00000543710 RAC3P60763 192 aa6.87□□□□□ -1.31
VPS13D-211ENST00000543710 PPP1R1AQ13522 171 aa6.87□□□□□ -1.31
VPS13D-211ENST00000543710 THSD4Q6ZMP0 1018 aa6.87□□□□□ -1.31
VPS13D-211ENST00000543710 RELL2Q8NC24 303 aaPredicted RBP6.87□□□□□ -1.31
VPS13D-211ENST00000543710 OR4C13Q8NGP0 309 aa6.87□□□□□ -1.31
VPS13D-211ENST00000543710 KCNK15Q9H427 330 aa6.87□□□□□ -1.31
VPS13D-211ENST00000543710 IKZF5Q9H5V7 419 aa6.87□□□□□ -1.31
VPS13D-211ENST00000543710 FLVCR2Q9UPI3 526 aa6.87□□□□□ -1.31
VPS13D-211ENST00000543710 IGFBP1P08833 259 aaPredicted RBP6.87□□□□□ -1.31
VPS13D-211ENST00000543710 CRISP2P16562 243 aa6.87□□□□□ -1.31
VPS13D-211ENST00000543710 CEACAM6P40199 344 aa6.87□□□□□ -1.31
VPS13D-211ENST00000543710 ID1P41134 155 aa6.87□□□□□ -1.31
VPS13D-211ENST00000543710 FDX2Q6P4F2 183 aa6.87□□□□□ -1.31
VPS13D-211ENST00000543710 SFTPA2Q8IWL1 248 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms