RNA–Protein interactions for RNA: ENST00000543510.1

TMEM258-207, Transcript of transmembrane protein 258, humanhuman

TSL 2 BASIC

Gene TMEM258, Length 1,692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-207ENST00000543510 SWI5Q1ZZU3 235 aa12.63□□□□□ -0.39
TMEM258-207ENST00000543510 OVCH2Q7RTZ1 564 aa12.63□□□□□ -0.39
TMEM258-207ENST00000543510 TMED4Q7Z7H5 227 aa12.63□□□□□ -0.39
TMEM258-207ENST00000543510 NRIP2Q9BQI9 281 aa12.63□□□□□ -0.39
TMEM258-207ENST00000543510 C12orf4Q9NQ89 552 aa12.63□□□□□ -0.39
TMEM258-207ENST00000543510 EHFQ9NZC4 300 aa12.63□□□□□ -0.39
TMEM258-207ENST00000543510 VSIG4Q9Y279 399 aa12.63□□□□□ -0.39
TMEM258-207ENST00000543510 OR2AT4A6NND4 320 aa12.62□□□□□ -0.39
TMEM258-207ENST00000543510 NOS1APO75052 506 aaPredicted RBP12.62□□□□□ -0.39
TMEM258-207ENST00000543510 GLAP06280 429 aa12.62□□□□□ -0.39
TMEM258-207ENST00000543510 ARPC4P59998 168 aa12.62□□□□□ -0.39
TMEM258-207ENST00000543510 C4orf46Q504U0 113 aa12.62□□□□□ -0.39
TMEM258-207ENST00000543510 C11orf53Q8IXP5 236 aa12.62□□□□□ -0.39
TMEM258-207ENST00000543510 OR52B4Q8NGK2 314 aa12.62□□□□□ -0.39
TMEM258-207ENST00000543510 DIRC2Q96SL1 478 aa12.62□□□□□ -0.39
TMEM258-207ENST00000543510 EGLN1Q9GZT9 426 aa12.62□□□□□ -0.39
TMEM258-207ENST00000543510 TLNRD1Q9H1K6 362 aa12.62□□□□□ -0.39
TMEM258-207ENST00000543510 IFT22Q9H7X7 185 aa12.62□□□□□ -0.39
TMEM258-207ENST00000543510 SAP30LQ9HAJ7 183 aa12.62□□□□□ -0.39
TMEM258-207ENST00000543510 ZNF222Q9UK12 451 aa12.62□□□□□ -0.39
TMEM258-207ENST00000543510 MEIKINA0A087WXM9 373 aa12.61□□□□□ -0.39
TMEM258-207ENST00000543510 FAM221AA4D161 298 aa12.61□□□□□ -0.39
TMEM258-207ENST00000543510 SDCBPO00560 298 aaPredicted RBP12.61□□□□□ -0.39
TMEM258-207ENST00000543510 DEGS1O15121 323 aa12.61□□□□□ -0.39
TMEM258-207ENST00000543510 OR4E1P0C645 316 aa12.61□□□□□ -0.39
TMEM258-207ENST00000543510 CXCL3P19876 107 aa12.61□□□□□ -0.39
TMEM258-207ENST00000543510 HOXA4Q00056 320 aaPredicted RBP12.61□□□□□ -0.39
TMEM258-207ENST00000543510 SLC25A42Q86VD7 318 aa12.61□□□□□ -0.39
TMEM258-207ENST00000543510 SUMF2Q8NBJ7 301 aa12.61□□□□□ -0.39
TMEM258-207ENST00000543510 POC1AQ8NBT0 407 aa12.61□□□□□ -0.39
TMEM258-207ENST00000543510 ZNF431Q8TF32 576 aaPredicted RBP12.61□□□□□ -0.39
TMEM258-207ENST00000543510 SCGB3A2Q96PL1 93 aa12.61□□□□□ -0.39
TMEM258-207ENST00000543510 FN3KRPQ9HA64 309 aa12.61□□□□□ -0.39
TMEM258-207ENST00000543510 ZNF286AQ9HBT8 521 aa12.61□□□□□ -0.39
TMEM258-207ENST00000543510 CHMP1AQ9HD42 196 aaPredicted RBP12.61□□□□□ -0.39
TMEM258-207ENST00000543510 IL19Q9UHD0 177 aa12.61□□□□□ -0.39
TMEM258-207ENST00000543510 HRNRQ86YZ3 2850 aaPredicted RBP12.61□□□□□ -0.39
TMEM258-207ENST00000543510 NXPH2O95156 264 aa12.61□□□□□ -0.39
TMEM258-207ENST00000543510 GOSR1O95249 250 aa12.61□□□□□ -0.39
TMEM258-207ENST00000543510 TLE4Q04727 773 aa12.61□□□□□ -0.39
TMEM258-207ENST00000543510 RBM39Q14498 530 aaKnown RBP12.61□□□□□ -0.39
TMEM258-207ENST00000543510 Q6P435 159 aa12.61□□□□□ -0.39
TMEM258-207ENST00000543510 LHFPL1Q86WI0 220 aa12.61□□□□□ -0.39
TMEM258-207ENST00000543510 SPICQ8N5J4 248 aa12.61□□□□□ -0.39
TMEM258-207ENST00000543510 MARCH1Q8TCQ1 289 aa12.61□□□□□ -0.39
TMEM258-207ENST00000543510 LRRC29Q8WV35 223 aa12.61□□□□□ -0.39
TMEM258-207ENST00000543510 CAPSLQ8WWF8 208 aa12.61□□□□□ -0.39
TMEM258-207ENST00000543510 NECAP2Q9NVZ3 263 aa12.61□□□□□ -0.39
TMEM258-207ENST00000543510 RAI1Q7Z5J4 1906 aaPredicted RBP12.6□□□□□ -0.39
TMEM258-207ENST00000543510 TRAV24A0A0B4J272 114 aa12.6□□□□□ -0.39
TMEM258-207ENST00000543510 CEACAM18A8MTB9 384 aa12.6□□□□□ -0.39
TMEM258-207ENST00000543510 CD8AP01732 235 aa12.6□□□□□ -0.39
TMEM258-207ENST00000543510 DANCRP0C864 163 aa12.6□□□□□ -0.39
TMEM258-207ENST00000543510 ANXA3P12429 323 aa12.6□□□□□ -0.39
TMEM258-207ENST00000543510 TNFRSF1AP19438 455 aa12.6□□□□□ -0.39
TMEM258-207ENST00000543510 CDKN1AP38936 164 aa12.6□□□□□ -0.39
TMEM258-207ENST00000543510 NKX2-5P52952 324 aaPredicted RBP12.6□□□□□ -0.39
TMEM258-207ENST00000543510 SRSF7Q16629 238 aaKnown RBP eCLIP12.6□□□□□ -0.39
TMEM258-207ENST00000543510 FIP1L1Q6UN15 594 aaKnown RBP12.6□□□□□ -0.39
TMEM258-207ENST00000543510 NOXA1Q86UR1 476 aa12.6□□□□□ -0.39
TMEM258-207ENST00000543510 MUC20Q8N307 709 aaPredicted RBP12.6□□□□□ -0.39
TMEM258-207ENST00000543510 NEK7Q8TDX7 302 aa12.6□□□□□ -0.39
TMEM258-207ENST00000543510 TRAF4Q9BUZ4 470 aaPredicted RBP12.6□□□□□ -0.39
TMEM258-207ENST00000543510 DPCDQ9BVM2 203 aaPredicted RBP12.6□□□□□ -0.39
TMEM258-207ENST00000543510 RIMS4Q9H426 269 aaPredicted RBP12.6□□□□□ -0.39
TMEM258-207ENST00000543510 HES4Q9HCC6 221 aa12.6□□□□□ -0.39
TMEM258-207ENST00000543510 GPR132Q9UNW8 380 aa12.6□□□□□ -0.39
TMEM258-207ENST00000543510 PPP1R3CQ9UQK1 317 aa12.6□□□□□ -0.39
TMEM258-207ENST00000543510 TENM4Q6N022 2769 aa12.6□□□□□ -0.39
TMEM258-207ENST00000543510 LRBAP50851 2863 aa12.59□□□□□ -0.39
TMEM258-207ENST00000543510 WNT9BO14905 357 aa12.59□□□□□ -0.39
TMEM258-207ENST00000543510 NAPSAO96009 420 aa12.59□□□□□ -0.39
TMEM258-207ENST00000543510 IRF2P14316 349 aa12.59□□□□□ -0.39
TMEM258-207ENST00000543510 ZNF44P15621 663 aa12.59□□□□□ -0.39
TMEM258-207ENST00000543510 NPY4RP50391 375 aa12.59□□□□□ -0.39
TMEM258-207ENST00000543510 ZNF146Q15072 292 aa12.59□□□□□ -0.39
TMEM258-207ENST00000543510 TESK1Q15569 626 aa12.59□□□□□ -0.39
TMEM258-207ENST00000543510 SPIN3Q5JUX0 258 aa12.59□□□□□ -0.39
TMEM258-207ENST00000543510 FAM209AQ5JX71 171 aa12.59□□□□□ -0.39
TMEM258-207ENST00000543510 AADACL3Q5VUY0 350 aa12.59□□□□□ -0.39
TMEM258-207ENST00000543510 HIST2H2BCQ6DN03 193 aa12.59□□□□□ -0.39
TMEM258-207ENST00000543510 FAHD2BQ6P2I3 314 aaPredicted RBP12.59□□□□□ -0.39
TMEM258-207ENST00000543510 WDR82Q6UXN9 313 aa12.59□□□□□ -0.39
TMEM258-207ENST00000543510 C17orf107Q6ZR85 190 aa12.59□□□□□ -0.39
TMEM258-207ENST00000543510 Q6ZS49 121 aa12.59□□□□□ -0.39
TMEM258-207ENST00000543510 TGIF2LYQ8IUE0 185 aa12.59□□□□□ -0.39
TMEM258-207ENST00000543510 OR11L1Q8NGX0 322 aa12.59□□□□□ -0.39
TMEM258-207ENST00000543510 FAHD2AQ96GK7 314 aa12.59□□□□□ -0.39
TMEM258-207ENST00000543510 ZNF436Q9C0F3 470 aaPredicted RBP12.59□□□□□ -0.39
TMEM258-207ENST00000543510 RAB1BQ9H0U4 201 aa12.59□□□□□ -0.39
TMEM258-207ENST00000543510 GCM1Q9NP62 436 aa12.59□□□□□ -0.39
TMEM258-207ENST00000543510 MGAT4CQ9UBM8 478 aa12.59□□□□□ -0.39
TMEM258-207ENST00000543510 SH2D1BO14796 132 aa12.58□□□□□ -0.4
TMEM258-207ENST00000543510 CYB5R3P00387 301 aaPredicted RBP12.58□□□□□ -0.4
TMEM258-207ENST00000543510 C1QBP02746 253 aa12.58□□□□□ -0.4
TMEM258-207ENST00000543510 CD55P08174 381 aa12.58□□□□□ -0.4
TMEM258-207ENST00000543510 OR5H8P0DN80 308 aa12.58□□□□□ -0.4
TMEM258-207ENST00000543510 GLRA1P23415 457 aa12.58□□□□□ -0.4
TMEM258-207ENST00000543510 FPR2P25090 351 aa12.58□□□□□ -0.4
TMEM258-207ENST00000543510 ECI1P42126 302 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms